BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0048.4
(422 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC217287 similar to UP|Q9SFF8 (Q9SFF8) F2O10.10 protein, partial... 403 e-113
BE191069 286 9e-78
TC232359 similar to UP|Q9SFF8 (Q9SFF8) F2O10.10 protein, partial... 264 6e-71
TC219299 weakly similar to UP|Q06810 (Q06810) Ypr075cp (Overprod... 233 9e-62
TC219300 similar to UP|Q9SFF8 (Q9SFF8) F2O10.10 protein, partial... 224 4e-59
BG239384 150 1e-36
TC219298 weakly similar to UP|Q9SFF8 (Q9SFF8) F2O10.10 protein, ... 134 1e-31
TC223849 similar to UP|Q9SFF8 (Q9SFF8) F2O10.10 protein, partial... 112 4e-25
TC220478 98 8e-21
TC228535 81 8e-16
TC231299 70 1e-12
BM892222 50 1e-06
CO036073 47 2e-05
BM887435 41 9e-04
TC221056 weakly similar to UP|Q93ZL1 (Q93ZL1) AT5g60720/mup24_13... 32 0.54
CO984524 32 0.54
TC209018 31 1.2
TC233056 31 1.2
BU091018 30 1.6
TC219904 similar to UP|Q6TKQ5 (Q6TKQ5) Protein kinase-like prote... 30 2.0
>TC217287 similar to UP|Q9SFF8 (Q9SFF8) F2O10.10 protein, partial (49%)
Length = 1093
Score = 403 bits (1036), Expect = e-113
Identities = 201/229 (87%), Positives = 212/229 (91%), Gaps = 1/229 (0%)
Frame = +3
Query: 195 ACKDLLHPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSKFIKDADEAAILQDFIICVEML 254
ACKDLL PFNPVPKFIIIKSVVFLTYWQGVLVFLAAKS+F+KDADEAA+LQDF ICVEML
Sbjct: 3 ACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSEFVKDADEAALLQDFFICVEML 182
Query: 255 VAAVGHFYAFPYKEYAGANIGGVSRGFTASLGHALMLNDFYHDTVHQFAPTYHDYVLYNH 314
VAAVGHFYAFPYKEYAGANIGG SRG TASL HAL LNDFYHDTVHQFAPTYHDYVLYNH
Sbjct: 183 VAAVGHFYAFPYKEYAGANIGG-SRGLTASLAHALKLNDFYHDTVHQFAPTYHDYVLYNH 359
Query: 315 -GEGEEGTRKYRSRTFVPLGPEMDAVRRNKHMFENKVDDIQLSRFSSSNSSTPSNSGPIS 373
GEGEEGTRKYRSRTFVP+GPEMD VRRNKH+F NK DD+QLS F SSNSS+PSNS PIS
Sbjct: 360 GGEGEEGTRKYRSRTFVPIGPEMDTVRRNKHLFGNKTDDVQLSNF-SSNSSSPSNSDPIS 536
Query: 374 DVSHSDAMKSSLLVDVSNSVSVPYDLTLIDLDLSDHPEKVPAVDKAGTR 422
DV HS AMKSSLLVDVSNS+SVPYD+TLIDLD S++PEKVPA DKAGTR
Sbjct: 537 DVPHSGAMKSSLLVDVSNSLSVPYDMTLIDLDASNYPEKVPAADKAGTR 683
>BE191069
Length = 577
Score = 286 bits (733), Expect = 9e-78
Identities = 145/192 (75%), Positives = 163/192 (84%)
Frame = +2
Query: 228 LAAKSKFIKDADEAAILQDFIICVEMLVAAVGHFYAFPYKEYAGANIGGVSRGFTASLGH 287
LAAKS FI+DADEAA+LQ+FII VEMLVAAVGHFYAF YKEYAGANIGG SRG TASLGH
Sbjct: 2 LAAKSGFIEDADEAALLQNFII*VEMLVAAVGHFYAFTYKEYAGANIGG-SRGLTASLGH 178
Query: 288 ALMLNDFYHDTVHQFAPTYHDYVLYNHGEGEEGTRKYRSRTFVPLGPEMDAVRRNKHMFE 347
A+ LNDFYHDTVHQFAPTYH YVLYNH EGEEGT KYRSRTFV +GP+MD+VRRNKHMF
Sbjct: 179 AMKLNDFYHDTVHQFAPTYHQYVLYNHSEGEEGTNKYRSRTFVTIGPQMDSVRRNKHMFG 358
Query: 348 NKVDDIQLSRFSSSNSSTPSNSGPISDVSHSDAMKSSLLVDVSNSVSVPYDLTLIDLDLS 407
+K+ DIQ+S S S SSTPSNSG + D ++SDA SSLLVD+SNSVS PYD TLIDL +
Sbjct: 359 DKLYDIQISSLSDSTSSTPSNSGSMPDATNSDATNSSLLVDMSNSVSEPYDWTLIDLYVY 538
Query: 408 DHPEKVPAVDKA 419
+PE+V D+A
Sbjct: 539 SYPEEVAVDDEA 574
>TC232359 similar to UP|Q9SFF8 (Q9SFF8) F2O10.10 protein, partial (37%)
Length = 719
Score = 264 bits (674), Expect = 6e-71
Identities = 125/159 (78%), Positives = 139/159 (86%)
Frame = +3
Query: 5 LPIYLYIVAFLCTIGAVSLALLHIYKHLVNYTEPTYQRYIVRIVFMVPVYALMSFLSLVL 64
+PI+LYIVAF+CT GA++L+LLHIYKHL+NYTEPTYQR+IVRIVFMVPVYALMSFLSLVL
Sbjct: 243 VPIFLYIVAFICTCGAIALSLLHIYKHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLVL 422
Query: 65 PASSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVVLSLSGRVLKPSWFLMTCCLSPIP 124
P SIYFNSIRE+YEAWVIYNFLSLCL WVGGPG+ +LSL+GRVLKPSWFL CCL P+
Sbjct: 423 PQGSIYFNSIREIYEAWVIYNFLSLCLEWVGGPGSXILSLTGRVLKPSWFLXNCCLPPLA 602
Query: 125 LDGRFIRKCKQGGLQFVILKPILVAVTLILYVKGKYKDG 163
LDG FIR CKQG LQFV + LV VTL Y KGKYKDG
Sbjct: 603 LDGGFIR*CKQGCLQFVNFETHLVVVTLYFYAKGKYKDG 719
>TC219299 weakly similar to UP|Q06810 (Q06810) Ypr075cp (Overproduction
induced pheromone resistant yeast 2), partial (5%)
Length = 762
Score = 233 bits (595), Expect = 9e-62
Identities = 120/155 (77%), Positives = 133/155 (85%)
Frame = +3
Query: 268 EYAGANIGGVSRGFTASLGHALMLNDFYHDTVHQFAPTYHDYVLYNHGEGEEGTRKYRSR 327
EY+ ANIGG SRG TASLGHAL LNDFYHDTVHQFAPTYH+YVLYNH EGEEGT+KYRSR
Sbjct: 3 EYSSANIGG-SRGVTASLGHALKLNDFYHDTVHQFAPTYHEYVLYNHSEGEEGTKKYRSR 179
Query: 328 TFVPLGPEMDAVRRNKHMFENKVDDIQLSRFSSSNSSTPSNSGPISDVSHSDAMKSSLLV 387
T VP+GPEMD+V RNKHM +K+DDIQLS SS+ SSTPSNSG I D S+SDA SSLLV
Sbjct: 180 TSVPIGPEMDSV-RNKHMSGDKLDDIQLSSLSST-SSTPSNSGSIPDASNSDATNSSLLV 353
Query: 388 DVSNSVSVPYDLTLIDLDLSDHPEKVPAVDKAGTR 422
D+SNSVS PYDLT IDLD+S +PE+VPA DKAG R
Sbjct: 354 DMSNSVSEPYDLTFIDLDVSSYPEEVPAADKAGGR 458
>TC219300 similar to UP|Q9SFF8 (Q9SFF8) F2O10.10 protein, partial (30%)
Length = 511
Score = 224 bits (572), Expect = 4e-59
Identities = 112/132 (84%), Positives = 117/132 (87%)
Frame = +2
Query: 176 IIYTFSYTMALYALALFYVACKDLLHPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSKFI 235
IIY SYTMALY LALFYVACKDLL PFNPVPKFIIIKSVVFLTYWQGVL FLAAKS FI
Sbjct: 2 IIYMISYTMALYVLALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLFFLAAKSGFI 181
Query: 236 KDADEAAILQDFIICVEMLVAAVGHFYAFPYKEYAGANIGGVSRGFTASLGHALMLNDFY 295
+DADEAA+LQ+FIICVEMLVAA GHFYAFPYKEYAGANI G SRG TASLGHAL LND+Y
Sbjct: 182 EDADEAALLQNFIICVEMLVAAAGHFYAFPYKEYAGANIRG-SRGLTASLGHALKLNDYY 358
Query: 296 HDTVHQFAPTYH 307
HDTVHQ + H
Sbjct: 359 HDTVHQVSLALH 394
>BG239384
Length = 430
Score = 150 bits (379), Expect = 1e-36
Identities = 66/89 (74%), Positives = 81/89 (90%)
Frame = +2
Query: 5 LPIYLYIVAFLCTIGAVSLALLHIYKHLVNYTEPTYQRYIVRIVFMVPVYALMSFLSLVL 64
+P++ ++VAF+CT+ A++LA+LHIY+HL++YTEPTYQRYIVRI+FMVP YAL SFL L +
Sbjct: 164 VPLFFHVVAFICTVAAIALAVLHIYRHLLSYTEPTYQRYIVRIIFMVPGYALKSFLVLCI 343
Query: 65 PASSIYFNSIREVYEAWVIYNFLSLCLAW 93
P S IYFNSIREVYEAWVIYNFLSLCLAW
Sbjct: 344 PGSPIYFNSIREVYEAWVIYNFLSLCLAW 430
>TC219298 weakly similar to UP|Q9SFF8 (Q9SFF8) F2O10.10 protein, partial
(14%)
Length = 569
Score = 134 bits (336), Expect = 1e-31
Identities = 67/90 (74%), Positives = 75/90 (82%)
Frame = +1
Query: 333 GPEMDAVRRNKHMFENKVDDIQLSRFSSSNSSTPSNSGPISDVSHSDAMKSSLLVDVSNS 392
GPEMD+VRRNKHMF NK+DDIQL S S SSTPSNSG + D S+SDA SSLLVD+SNS
Sbjct: 1 GPEMDSVRRNKHMFGNKLDDIQLXSLSYSTSSTPSNSGSMPDASNSDATNSSLLVDMSNS 180
Query: 393 VSVPYDLTLIDLDLSDHPEKVPAVDKAGTR 422
VS PYDLTLIDLD+S +PE+VPA DKAG R
Sbjct: 181 VSEPYDLTLIDLDVSSYPEEVPAADKAGGR 270
>TC223849 similar to UP|Q9SFF8 (Q9SFF8) F2O10.10 protein, partial (15%)
Length = 440
Score = 112 bits (279), Expect = 4e-25
Identities = 53/64 (82%), Positives = 59/64 (91%)
Frame = +2
Query: 7 IYLYIVAFLCTIGAVSLALLHIYKHLVNYTEPTYQRYIVRIVFMVPVYALMSFLSLVLPA 66
I LYIVAF+CT GA++L+LLHIYKHL+NYTEPTYQR+IVRIVFMVPVYALMSFLSL LP
Sbjct: 248 ILLYIVAFICTCGAIALSLLHIYKHLLNYTEPTYQRFIVRIVFMVPVYALMSFLSLFLPQ 427
Query: 67 SSIY 70
SIY
Sbjct: 428 GSIY 439
>TC220478
Length = 801
Score = 97.8 bits (242), Expect = 8e-21
Identities = 51/134 (38%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Frame = +1
Query: 141 VILKPILVAVTLILYVKGKYKDGNFSPKQSYLYLTIIYTFSYTMALYALALFYVACKDLL 200
++ K + +IL G Y +G F Y Y+ ++ FS + ALY L FY KD L
Sbjct: 181 MLTKAFTAILAVILEAFGVYCEGEFKVGCGYPYMAVVLNFSQSWALYCLVQFYTDTKDEL 360
Query: 201 HPFNPVPKFIIIKSVVFLTYWQGVLVFLAA-----KSKFIKDADEAAILQDFIICVEMLV 255
P+ KF+ KS+VFLT+WQGV + L + KS + + +QDFIIC+EM +
Sbjct: 361 AHIKPLAKFLTFKSIVFLTWWQGVAIALLSTFGLIKSPIAQGLQFKSSVQDFIICIEMGI 540
Query: 256 AAVGHFYAFPYKEY 269
A++ H Y FP K Y
Sbjct: 541 ASIVHLYVFPAKPY 582
>TC228535
Length = 980
Score = 81.3 bits (199), Expect = 8e-16
Identities = 59/211 (27%), Positives = 98/211 (45%), Gaps = 13/211 (6%)
Frame = +1
Query: 70 YFNSIREVYEAWVIYNFLSLCLAWVG---GPGAVVLSLSGRVLKPSWFLMTCCLSPIPLD 126
+ +SI+E YEA VI FL L ++ V + GR + S+ + LD
Sbjct: 55 FLDSIKECYEALVIAKFLGLMYNYLNISLSKNIVPDEIKGREIHHSFPMTLFQPHTTRLD 234
Query: 127 GRFIRKCKQGGLQFVILKPILVAVTLILYVKGKYKDGNFSPKQSYLYLTIIYTFSYTMAL 186
+ ++ K QFV+++P+ + + L Y P T+I S ++AL
Sbjct: 235 HKTLKLLKNWTWQFVVIRPVCSILMITLQYLDVY------PTWVSWINTVILNISVSLAL 396
Query: 187 YALALFYVACKDLLHPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSKFIKDADEAAIL-- 244
Y+L +FY L P P+ KF+ IK +VF +WQG+++ L A I+ +
Sbjct: 397 YSLVVFYHVFSKELEPHKPLAKFLCIKGIVFFCFWQGIVLDLLAALGIIRSRYSWLAVER 576
Query: 245 -----QDFIICVEMLVAAVGHFYAF---PYK 267
Q+ ++CVEM+ ++ YA+ PYK
Sbjct: 577 IEEGYQNLLVCVEMVFFSIYQQYAYSAAPYK 669
>TC231299
Length = 517
Score = 70.5 bits (171), Expect = 1e-12
Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Frame = +1
Query: 139 QFVILKPILVAVTLILYVKGKYKDGNFSPKQSYLYLTIIYTFSYTMALYALALFYVACKD 198
QFV+++P+ + + L + G Y P TI+ S ++ALY+L +FY
Sbjct: 73 QFVVVRPVCSVLMIALQLVGLY------PTWLSWAFTIVLNISVSLALYSLVVFYHVFAK 234
Query: 199 LLHPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKSKFIKD---------ADEAAILQDFII 249
L P P+ KF+ IK +VF +WQG+L+ L A + I+ +EA +Q+ ++
Sbjct: 235 ELAPHKPLAKFLCIKGIVFFCFWQGMLLELLAATGVIQSRHLRLDVEHIEEA--MQNILV 408
Query: 250 CVEMLVAAVGHFYAF 264
C+EM++ +V YA+
Sbjct: 409 CLEMVIFSVLQQYAY 453
>BM892222
Length = 422
Score = 50.4 bits (119), Expect = 1e-06
Identities = 27/84 (32%), Positives = 42/84 (49%)
Frame = +1
Query: 139 QFVILKPILVAVTLILYVKGKYKDGNFSPKQSYLYLTIIYTFSYTMALYALALFYVACKD 198
QFV+++P+ + + L Y P T+I S ++ALY+L +FY
Sbjct: 34 QFVVIRPVCSILMITLQYLEVY------PTWVSWTNTVILNISVSLALYSLVVFYHVFSK 195
Query: 199 LLHPFNPVPKFIIIKSVVFLTYWQ 222
L P P+ KF+ IK +VF +WQ
Sbjct: 196 ELEPHKPLAKFLCIKGIVFFCFWQ 267
>CO036073
Length = 385
Score = 46.6 bits (109), Expect = 2e-05
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 11/93 (11%)
Frame = -3
Query: 13 AFLCTIGAVSLALLHIY-------KHLVNYTEPTYQRYIVRIVFMVPVYALMSFLSLV-L 64
A + +G+ A+L ++ +HL + P Q+ I+ I+ M P+YA +SF+ L+ +
Sbjct: 371 AQITVLGSAFCAMLSMHFTSQLLSQHLFYWKNPKEQKAIIIIILMAPIYAAVSFVGLLDI 192
Query: 65 PASSIYF---NSIREVYEAWVIYNFLSLCLAWV 94
S +F S++E YEA VI FL+L +++
Sbjct: 191 RGSKEFFTFLESVKECYEALVIAKFLALMYSYL 93
>BM887435
Length = 428
Score = 41.2 bits (95), Expect = 9e-04
Identities = 22/58 (37%), Positives = 35/58 (59%)
Frame = +2
Query: 9 LYIVAFLCTIGAVSLALLHIYKHLVNYTEPTYQRYIVRIVFMVPVYALMSFLSLVLPA 66
L AFL A+S+ LL ++HL Y P Q++++ ++ MVP Y+ S +SLV P+
Sbjct: 257 LIAAAFLLLTLALSMYLL--FEHLSAYKNPEEQKFLIGVILMVPCYSFESCVSLVNPS 424
>TC221056 weakly similar to UP|Q93ZL1 (Q93ZL1) AT5g60720/mup24_130, partial
(15%)
Length = 1022
Score = 32.0 bits (71), Expect = 0.54
Identities = 13/32 (40%), Positives = 18/32 (55%)
Frame = +2
Query: 191 LFYVACKDLLHPFNPVPKFIIIKSVVFLTYWQ 222
+FY L P P+ KF+ IK +VF +WQ
Sbjct: 2 VFYHVFAKELAPHKPLAKFLCIKGIVFFCFWQ 97
>CO984524
Length = 685
Score = 32.0 bits (71), Expect = 0.54
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Frame = -2
Query: 56 LMSFLSLVLPASSIYFNSIREVYEAWVIYNFLSLCLAWVGGPGAVV-----LSL---SGR 107
+M FLSL+ +++ IR+ YEA+ +Y F +A +GG + +SL S
Sbjct: 663 MMQFLSLLDSSAAFNCEVIRDCYEAFALYCFERYLIACLGGEDKTIQFMESMSLTESSTP 484
Query: 108 VLKPSW--------FLMTCCLSPIPLDGRFIRKCKQGGLQFVI 142
+LK ++ F + C L L F + K G +Q+++
Sbjct: 483 LLKEAYAYGVVEHPFPVNCFLRDWYLGPDFYQSVKIGIVQYIV 355
>TC209018
Length = 1688
Score = 30.8 bits (68), Expect = 1.2
Identities = 17/60 (28%), Positives = 33/60 (54%)
Frame = +1
Query: 10 YIVAFLCTIGAVSLALLHIYKHLVNYTEPTYQRYIVRIVFMVPVYALMSFLSLVLPASSI 69
YI+ FLCT+GA + +Y L++ + T+++ + + F V V + + S V +S+
Sbjct: 811 YIIGFLCTLGASA-----VYSLLLSLMQLTFEKVLKKETFSV-VLEMQIYTSFVASGASV 972
>TC233056
Length = 680
Score = 30.8 bits (68), Expect = 1.2
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 16/72 (22%)
Frame = +3
Query: 172 LYLTIIYTFSYTMALYALALFY--------VACKDLLHPFNPVP--------KFIIIKSV 215
++LTI++ F + L LF + CK LLH F+P P +F IK+
Sbjct: 111 IHLTILHIFIISQPLLVTKLFLSIRGPLIKMYCKILLHGFDPCPN*EDCVIQQFASIKTC 290
Query: 216 VFLTYWQGVLVF 227
+ Y+ VL +
Sbjct: 291 ILKNYFVSVLPY 326
>BU091018
Length = 353
Score = 30.4 bits (67), Expect = 1.6
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 43 YIVRIVFMVPVYALMSFLSLVLPASSIYFNSIREVYEAWVIYNFLSLCLAWV 94
+I R F + SF + P SS++F ++V+ ++ NFLSL + WV
Sbjct: 89 FITRDAFAITFLVFSSFTHFI-PISSLFF--FQKVFIFGLLVNFLSLLIIWV 235
>TC219904 similar to UP|Q6TKQ5 (Q6TKQ5) Protein kinase-like protein, partial
(22%)
Length = 760
Score = 30.0 bits (66), Expect = 2.0
Identities = 18/54 (33%), Positives = 27/54 (49%), Gaps = 2/54 (3%)
Frame = +2
Query: 200 LHPFNPVPKFIIIKSV--VFLTYWQGVLVFLAAKSKFIKDADEAAILQDFIICV 251
LHP N +PKFI K+V V+L + +V A + EA I+ + + V
Sbjct: 413 LHPRNTIPKFIQYKAVEKVYLLQEKEAMVIDALSVTILIQEQEAMIIDELFVMV 574
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.325 0.141 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,524,909
Number of Sequences: 63676
Number of extensions: 330553
Number of successful extensions: 2506
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 2479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2497
length of query: 422
length of database: 12,639,632
effective HSP length: 100
effective length of query: 322
effective length of database: 6,272,032
effective search space: 2019594304
effective search space used: 2019594304
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0048.4