TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0039.6
         (578 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC209636 similar to UP|Q9FNF8 (Q9FNF8) Ubiquitin, partial (47%)       537  e-153
TC216827 similar to UP|Q9SGW8 (Q9SGW8) F1N19.4, partial (57%)         480  e-136
TC216826 similar to UP|Q9ZPY9 (Q9ZPY9) Expressed protein (At2g46...   356  1e-98
TC207534 similar to UP|Q6NPL1 (Q6NPL1) At1g64460, partial (65%)       295  3e-80
CO983626                                                              284  9e-77
CA935325                                                              193  2e-49
TC207533 weakly similar to UP|Q9ZPY9 (Q9ZPY9) Expressed protein ...   174  1e-43
BM527564                                                              135  4e-32
TC207535 weakly similar to UP|Q9ZPY9 (Q9ZPY9) Expressed protein ...   130  2e-30
AW831763 homologue to GP|16648787|gb At1g26270/F28B23_7 {Arabido...    82  9e-16
AI494802 homologue to GP|16974596|gb| At1g13640/F21F23_7 {Arabid...    72  5e-13
TC203625 UP|Q39257 (Q39257) Ubiquitin, partial (83%)                   71  1e-12
TC225521 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin ...    71  1e-12
TC224594 PIR|S01425|UQMUM polyubiquitin 5 - Arabidopsis thaliana...    71  1e-12
TC203465 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin ...    71  1e-12
TC203313 PIR|S01425|UQMUM polyubiquitin 5 - Arabidopsis thaliana...    71  1e-12
TC203627 UP|Q41067 (Q41067) Polyubiquitin, partial (47%)               71  1e-12
TC214459 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin ...    71  1e-12
TC225522 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin ...    70  2e-12
TC203458 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin ...    70  2e-12

>TC209636 similar to UP|Q9FNF8 (Q9FNF8) Ubiquitin, partial (47%)
          Length = 895

 Score =  537 bits (1384), Expect = e-153
 Identities = 258/299 (86%), Positives = 279/299 (93%)
 Frame = +1

Query: 259 KGGKPIQSSEGSGGAYLMQDSLGLKYVSVFKPIDEEPMAINNPRGLPLSVDGEGGLKKGT 318
           KG KPIQSSEGSGGAYLMQDS GLKYVSVFKPIDEEPMAINNPRGLP+S DGEG LKKGT
Sbjct: 1   KGCKPIQSSEGSGGAYLMQDSSGLKYVSVFKPIDEEPMAINNPRGLPVSEDGEG-LKKGT 177

Query: 319 RVGQGALREVAAYILDHPKKGPRSYHNSDEKGFAGVPPTVMVKCLHKGFHHPEGYNSASD 378
           RVGQGALREVAAYILDHP+KGPRSY+N++E GFAGVPPTVMVKCL KGFH+ E Y + S 
Sbjct: 178 RVGQGALREVAAYILDHPRKGPRSYYNNEEGGFAGVPPTVMVKCLDKGFHNIEDYQNDSA 357

Query: 379 NVKLGSLQMFMKNIGSCEDMGPSVFPVEEVHKISVLDIRLANADRHAGNILVAKDGENGS 438
           NVK+GSLQMFM+NIGSCEDMGPS FPVEEVHKISVLDIRL NADRHAGNIL+A+DGE+G 
Sbjct: 358 NVKIGSLQMFMRNIGSCEDMGPSAFPVEEVHKISVLDIRLVNADRHAGNILIARDGEDGQ 537

Query: 439 TVLIPIDHGYCLPESFEDCTFDWLYWPQAKEPYSPDTIEYIKSLDAEEDIKLLKFHGWEL 498
           T+LIPIDHGYCLPESFEDCTFDWLYWPQAKEPYSPDTI+YIKSLDAEEDIKLLKFHGW+L
Sbjct: 538 TILIPIDHGYCLPESFEDCTFDWLYWPQAKEPYSPDTIDYIKSLDAEEDIKLLKFHGWDL 717

Query: 499 PPECARLLRISTMLLKKGAEKGLPPFTIGSIMCRETLKKKSVIEQIIEEAEEGALPGTS 557
           PP+CA++LRISTMLL KGAE+GL PF +GSIMCRETLKKKSVIEQI+EEAEE A PG S
Sbjct: 718 PPKCAQILRISTMLLLKGAERGLTPFALGSIMCRETLKKKSVIEQIVEEAEEAAFPGAS 894


>TC216827 similar to UP|Q9SGW8 (Q9SGW8) F1N19.4, partial (57%)
          Length = 1243

 Score =  480 bits (1235), Expect = e-136
 Identities = 237/338 (70%), Positives = 272/338 (80%)
 Frame = +1

Query: 238 PKIKIPQVIQELIKITSEGLEKGGKPIQSSEGSGGAYLMQDSLGLKYVSVFKPIDEEPMA 297
           PK  +   I  +   T EGL+ G  PI+S+EG+GGAY M DS G KY+SVFKPIDEEPMA
Sbjct: 4   PKK*LASEIWNMRNSTYEGLDSGNYPIRSAEGTGGAYFMLDSTGQKYISVFKPIDEEPMA 183

Query: 298 INNPRGLPLSVDGEGGLKKGTRVGQGALREVAAYILDHPKKGPRSYHNSDEKGFAGVPPT 357
           +NNPRGLP S DGEG LKKGT VGQGA REVAAYILDHP  G RS    DEKGFAGVPPT
Sbjct: 184 VNNPRGLPFSEDGEG-LKKGTTVGQGAFREVAAYILDHPMSGRRSLFG-DEKGFAGVPPT 357

Query: 358 VMVKCLHKGFHHPEGYNSASDNVKLGSLQMFMKNIGSCEDMGPSVFPVEEVHKISVLDIR 417
           VMVKCLHKGF+HP    +     K+GSLQMFM+N GSCED+GP  FPV+EVHKISVLD+R
Sbjct: 358 VMVKCLHKGFNHPGDLTA-----KIGSLQMFMENNGSCEDIGPGAFPVKEVHKISVLDMR 522

Query: 418 LANADRHAGNILVAKDGENGSTVLIPIDHGYCLPESFEDCTFDWLYWPQAKEPYSPDTIE 477
           LANADRHAGNIL+ K+ EN   VLIPIDHGYCLP SFEDCTF+WLYWPQA++PYSP+ I+
Sbjct: 523 LANADRHAGNILIGKEKENDQAVLIPIDHGYCLPTSFEDCTFEWLYWPQARQPYSPEIID 702

Query: 478 YIKSLDAEEDIKLLKFHGWELPPECARLLRISTMLLKKGAEKGLPPFTIGSIMCRETLKK 537
           YIKSLDA+EDI LLKFHGW LP ECAR L+ISTMLLKKG ++G+ PF IGS+MCRE+L K
Sbjct: 703 YIKSLDADEDIALLKFHGWNLPVECARTLQISTMLLKKGVKRGMTPFAIGSLMCRESLNK 882

Query: 538 KSVIEQIIEEAEEGALPGTSEASFLDLVSVIMDSHLEE 575
           +SVIE I++ A +  LP TSEA+FLD VS IMD HL+E
Sbjct: 883 ESVIEGIVKAALDSVLPCTSEATFLDTVSEIMDQHLDE 996


>TC216826 similar to UP|Q9ZPY9 (Q9ZPY9) Expressed protein
           (At2g46500/F11C10.19), partial (39%)
          Length = 850

 Score =  356 bits (914), Expect = 1e-98
 Identities = 172/247 (69%), Positives = 202/247 (81%), Gaps = 2/247 (0%)
 Frame = +2

Query: 331 YILDHPKKGPRSYHN--SDEKGFAGVPPTVMVKCLHKGFHHPEGYNSASDNVKLGSLQMF 388
           Y+LDHP  G R  H+   D KGFAGVPPT+MVKCLHK F++P          K+GSLQMF
Sbjct: 2   YVLDHPLSG-RQRHSLFGDGKGFAGVPPTLMVKCLHKAFNYPRELTP-----KIGSLQMF 163

Query: 389 MKNIGSCEDMGPSVFPVEEVHKISVLDIRLANADRHAGNILVAKDGENGSTVLIPIDHGY 448
            +N GSCEDMGP  FPV+EVHKI+VLDIRLANADRHAGNIL++K+ +N  +VLIPIDHGY
Sbjct: 164 TENSGSCEDMGPGAFPVKEVHKITVLDIRLANADRHAGNILISKEEDNNQSVLIPIDHGY 343

Query: 449 CLPESFEDCTFDWLYWPQAKEPYSPDTIEYIKSLDAEEDIKLLKFHGWELPPECARLLRI 508
           CLP SFEDCTF+WLYWPQA++PYS +TI+YIKSLDAEEDI LLKFHGW+LP ECAR LRI
Sbjct: 344 CLPTSFEDCTFEWLYWPQARQPYSSETIDYIKSLDAEEDIALLKFHGWDLPVECARTLRI 523

Query: 509 STMLLKKGAEKGLPPFTIGSIMCRETLKKKSVIEQIIEEAEEGALPGTSEASFLDLVSVI 568
           STMLLKKG E+GL PF IGS+MCRE+L K+SVIE+I++ A +  LPGTSEA+ LD VS I
Sbjct: 524 STMLLKKGVERGLTPFAIGSLMCRESLNKESVIEEIVQAALDSVLPGTSEATLLDAVSQI 703

Query: 569 MDSHLEE 575
           MD  L+E
Sbjct: 704 MDLRLDE 724


>TC207534 similar to UP|Q6NPL1 (Q6NPL1) At1g64460, partial (65%)
          Length = 870

 Score =  295 bits (756), Expect = 3e-80
 Identities = 139/195 (71%), Positives = 165/195 (84%)
 Frame = +2

Query: 381 KLGSLQMFMKNIGSCEDMGPSVFPVEEVHKISVLDIRLANADRHAGNILVAKDGENGSTV 440
           K+GSLQMFM N G+CED+GP  F  EEVHKI+VLD+R+ANADRHAGNIL  K+   G T+
Sbjct: 8   KVGSLQMFMSNDGNCEDLGPGAFSAEEVHKITVLDLRMANADRHAGNILFRKEA-GGHTL 184

Query: 441 LIPIDHGYCLPESFEDCTFDWLYWPQAKEPYSPDTIEYIKSLDAEEDIKLLKFHGWELPP 500
           LIPIDHGYCLPE FEDCTFDWLYWPQA++PYSPDT++YIKSLDAE+DI+LLK+ GW++P 
Sbjct: 185 LIPIDHGYCLPEKFEDCTFDWLYWPQARQPYSPDTVDYIKSLDAEKDIELLKYFGWDVPV 364

Query: 501 ECARLLRISTMLLKKGAEKGLPPFTIGSIMCRETLKKKSVIEQIIEEAEEGALPGTSEAS 560
           ECAR LRISTMLLKKG E+GL P+ IGSIMCRE L K+SVIE+II EA+E  LPG  E+ 
Sbjct: 365 ECARTLRISTMLLKKGVERGLTPYDIGSIMCRENLNKESVIEEIICEAQESLLPGMEESV 544

Query: 561 FLDLVSVIMDSHLEE 575
           FL+ VS IMDS L++
Sbjct: 545 FLESVSQIMDSRLDK 589


>CO983626 
          Length = 684

 Score =  284 bits (726), Expect = 9e-77
 Identities = 130/190 (68%), Positives = 160/190 (83%)
 Frame = -2

Query: 386 QMFMKNIGSCEDMGPSVFPVEEVHKISVLDIRLANADRHAGNILVAKDGENGSTVLIPID 445
           Q FM N G+CED GP  FPVEEVHKI+VLDIRLANADRHAGNIL+ K+ + G   LIPID
Sbjct: 683 QKFMSNDGNCEDYGPXAFPVEEVHKIAVLDIRLANADRHAGNILIRKEAD-GQIKLIPID 507

Query: 446 HGYCLPESFEDCTFDWLYWPQAKEPYSPDTIEYIKSLDAEEDIKLLKFHGWELPPECARL 505
           HGYCLP+ FEDC+FDWLYWPQA++PYSP+T++YI SLDAE+D++LLK +GW++P ECAR 
Sbjct: 506 HGYCLPDKFEDCSFDWLYWPQARQPYSPETVDYINSLDAEKDLELLKCYGWDIPLECART 327

Query: 506 LRISTMLLKKGAEKGLPPFTIGSIMCRETLKKKSVIEQIIEEAEEGALPGTSEASFLDLV 565
           LRISTMLLKKG E+GL P+ IGSIMCRE L K+SVIE+II EA++  LPG  E++FL+ +
Sbjct: 326 LRISTMLLKKGVERGLTPYAIGSIMCRENLNKESVIEEIIGEAQDSLLPGMEESAFLEAI 147

Query: 566 SVIMDSHLEE 575
           S IMD HL++
Sbjct: 146 SQIMDYHLDK 117


>CA935325 
          Length = 453

 Score =  193 bits (490), Expect = 2e-49
 Identities = 94/149 (63%), Positives = 120/149 (80%)
 Frame = +3

Query: 229 FLLEPIVVNPKIKIPQVIQELIKITSEGLEKGGKPIQSSEGSGGAYLMQDSLGLKYVSVF 288
           F LEPI+VNPKI     + ++I  T EGL+KG  PI+SSEG+GG YLM+DS G ++VSVF
Sbjct: 6   FWLEPIIVNPKINFFPFLWDMINSTFEGLKKGNHPIRSSEGTGGTYLMRDSTGQEHVSVF 185

Query: 289 KPIDEEPMAINNPRGLPLSVDGEGGLKKGTRVGQGALREVAAYILDHPKKGPRSYHNSDE 348
           KP+DEEPMA+NNPRGLP S +GE GLK+GT+VG+GALREVAAY+LDHPK GPR   + + 
Sbjct: 186 KPMDEEPMAVNNPRGLPNSSNGE-GLKRGTKVGEGALREVAAYLLDHPKSGPR-LASGEA 359

Query: 349 KGFAGVPPTVMVKCLHKGFHHPEGYNSAS 377
            GF+GVPP+VMV+CLH+ F+HP G+  +S
Sbjct: 360 VGFSGVPPSVMVQCLHQEFNHPNGFACSS 446


>TC207533 weakly similar to UP|Q9ZPY9 (Q9ZPY9) Expressed protein
           (At2g46500/F11C10.19), partial (21%)
          Length = 929

 Score =  174 bits (441), Expect = 1e-43
 Identities = 82/123 (66%), Positives = 99/123 (79%)
 Frame = +1

Query: 451 PESFEDCTFDWLYWPQAKEPYSPDTIEYIKSLDAEEDIKLLKFHGWELPPECARLLRIST 510
           P  FEDCTFDWLYW QA+EPYSPD ++YIKSLDAE+D +LLK++GW +P ECAR LRIST
Sbjct: 136 PSWFEDCTFDWLYWSQAREPYSPDRVDYIKSLDAEKDTELLKYYGWNVPVECARTLRIST 315

Query: 511 MLLKKGAEKGLPPFTIGSIMCRETLKKKSVIEQIIEEAEEGALPGTSEASFLDLVSVIMD 570
           +LLKKG ++GL P+ IGSIM RE L K+SVI++II EA+E  LPG  E  FL+ VS IMD
Sbjct: 316 ILLKKGVDRGLTPYEIGSIMSRENLNKESVIDEIICEAQESLLPGMEEYVFLESVSQIMD 495

Query: 571 SHL 573
           S L
Sbjct: 496 SRL 504


>BM527564 
          Length = 429

 Score =  135 bits (341), Expect = 4e-32
 Identities = 71/153 (46%), Positives = 91/153 (59%), Gaps = 6/153 (3%)
 Frame = +2

Query: 321 GQGALREVAAYILDHPKKGPRSYHNSDEKGFAGVPPTVMVKCLHKGFHHPEGYNSASDNV 380
           G+  +RE+AAY+LDH              G AGVPPTV+VK  H  F       S+S   
Sbjct: 2   GETGIRELAAYLLDHG-------------GLAGVPPTVLVKFSHAAFFGAASSCSSSHTP 142

Query: 381 KLGSLQMFMKNIGSCEDMGPSVFPVEEVHKISVLDIRLANADRHAGNILVAKDGEN---- 436
           K+ SLQ F+ +     ++GPS FPV  VH+I +LDIR+ N DRHAGN+LV K   N    
Sbjct: 143 KIASLQRFVSHGFDAGELGPSFFPVSSVHQIGILDIRIMNLDRHAGNMLVMKHDHNNSGY 322

Query: 437 --GSTVLIPIDHGYCLPESFEDCTFDWLYWPQA 467
             G   L+PIDHG+CLPE  +D  F+WL+WPQA
Sbjct: 323 VDGVADLVPIDHGFCLPEWLDDPYFEWLHWPQA 421


>TC207535 weakly similar to UP|Q9ZPY9 (Q9ZPY9) Expressed protein
           (At2g46500/F11C10.19), partial (14%)
          Length = 730

 Score =  130 bits (327), Expect = 2e-30
 Identities = 56/77 (72%), Positives = 68/77 (87%)
 Frame = +1

Query: 454 FEDCTFDWLYWPQAKEPYSPDTIEYIKSLDAEEDIKLLKFHGWELPPECARLLRISTMLL 513
           FEDCTFDWLYW QA+EPYSPD ++YIKSLDAE+D +LLK++GW +P ECAR LRIST+LL
Sbjct: 499 FEDCTFDWLYWSQAREPYSPDRVDYIKSLDAEKDTELLKYYGWNVPVECARTLRISTILL 678

Query: 514 KKGAEKGLPPFTIGSIM 530
           KKG ++GL P+ IGSIM
Sbjct: 679 KKGVDRGLTPYEIGSIM 729


>AW831763 homologue to GP|16648787|gb At1g26270/F28B23_7 {Arabidopsis
           thaliana}, partial (18%)
          Length = 382

 Score = 81.6 bits (200), Expect = 9e-16
 Identities = 53/140 (37%), Positives = 72/140 (50%), Gaps = 5/140 (3%)
 Frame = +1

Query: 267 SEGSGGAYLMQDSLGLKYVSVFKPIDEEPMAINNPRGLPLSVDGEGGLKKGTRVGQGALR 326
           + G GGAY  ++S G + V++ KP DEEP A NNP+G      G+ GLK+  RVG+   R
Sbjct: 1   TSGLGGAYYFRNSNG-ENVAIVKPTDEEPYAPNNPKGFVGKALGQPGLKRSVRVGETGFR 177

Query: 327 EVAAYILDHPKKGPRSYHNSDEKGFAGVPPTVMVKCLHKGFHHPEGYNSASDN-----VK 381
           EVAAY+LDH               FA VP T +VK  H  F+  +  N +  +      K
Sbjct: 178 EVAAYLLDHDH-------------FANVPFTALVKVTHSIFNVNDRVNGSMHHNKKQISK 318

Query: 382 LGSLQMFMKNIGSCEDMGPS 401
           + SLQ F+ +     D G S
Sbjct: 319 IASLQQFIPHDFDASDHGTS 378


>AI494802 homologue to GP|16974596|gb| At1g13640/F21F23_7 {Arabidopsis
           thaliana}, partial (14%)
          Length = 303

 Score = 72.4 bits (176), Expect = 5e-13
 Identities = 44/116 (37%), Positives = 59/116 (49%), Gaps = 7/116 (6%)
 Frame = +1

Query: 316 KGTRVGQGALREVAAYILDHPKKGPRSYHNSDEKGFAGVPPTVMVKCLHKGFHHPEGYNS 375
           +  RVG+   REVAAY+LD+               FA VPPT +VK  H  F+  +G N 
Sbjct: 1   RSVRVGETGFREVAAYLLDYDH-------------FANVPPTALVKITHSVFNVNDGVNG 141

Query: 376 ASDNV-------KLGSLQMFMKNIGSCEDMGPSVFPVEEVHKISVLDIRLANADRH 424
             +N+       K+ S Q F+ +     D G S FP   VH+I +LDIR+ N DRH
Sbjct: 142 --NNLWRKRLFSKIASFQQFIPHDFDASDHGTSSFPDASVHRIGILDIRILNTDRH 303


>TC203625 UP|Q39257 (Q39257) Ubiquitin, partial (83%)
          Length = 1427

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 53/178 (29%), Positives = 92/178 (50%), Gaps = 3/178 (1%)
 Frame = +3

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 300 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 476

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 477 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IP 650

Query: 144 LADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR-TSDAKVTTKPV-GKDFELSIEA 199
              Q L++ G+ LED R + D     ++ +H ++R     ++  K + GK   L +E+
Sbjct: 651 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 824



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 53/178 (29%), Positives = 92/178 (50%), Gaps = 3/178 (1%)
 Frame = +3

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 528 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 704

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 705 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IP 878

Query: 144 LADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR-TSDAKVTTKPV-GKDFELSIEA 199
              Q L++ G+ LED R + D     ++ +H ++R     ++  K + GK   L +E+
Sbjct: 879 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLEVES 1052



 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 48/155 (30%), Positives = 82/155 (51%), Gaps = 1/155 (0%)
 Frame = +3

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 756 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 932

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 933 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLEVESSDTIDNVKAKIQDK-EG-IP 1106

Query: 144 LADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR 178
              Q L++ G+ LED R + D     ++ +H ++R
Sbjct: 1107PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 1211



 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 50/168 (29%), Positives = 86/168 (50%), Gaps = 2/168 (1%)
 Frame = +3

Query: 34  TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLCVRDYGVSDGN 93
           T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   + DY +   +
Sbjct: 102 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKES 278

Query: 94  VLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLDLADQELVWEG 153
            LHLVLRL     I V+T  GK     V     +  VK +I  K +G +    Q L++ G
Sbjct: 279 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IPPDQQRLIFAG 452

Query: 154 EALEDQRLIEDICKDNDAVIHFLVR-TSDAKVTTKPV-GKDFELSIEA 199
           + LED R + D     ++ +H ++R     ++  K + GK   L +E+
Sbjct: 453 KQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 596



 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 28/78 (35%), Positives = 47/78 (59%), Gaps = 1/78 (1%)
 Frame = +3

Query: 25   LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
            LR  + I++ T+ G  V + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 984  LRGGMQIFVKTLTGKTVTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 1160

Query: 84   VRDYGVSDGNVLHLVLRL 101
            + DY +   + LHLVLRL
Sbjct: 1161 LADYNIQKESTLHLVLRL 1214


>TC225521 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin {Nicotiana
           sylvestris;} , partial (81%)
          Length = 1405

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 53/178 (29%), Positives = 92/178 (50%), Gaps = 3/178 (1%)
 Frame = +2

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 257 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 433

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 434 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IP 607

Query: 144 LADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR-TSDAKVTTKPV-GKDFELSIEA 199
              Q L++ G+ LED R + D     ++ +H ++R     ++  K + GK   L +E+
Sbjct: 608 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 781



 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 48/155 (30%), Positives = 82/155 (51%), Gaps = 1/155 (0%)
 Frame = +2

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 485 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 661

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 662 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IP 835

Query: 144 LADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR 178
              Q L++ G+ LED R + D     ++ +H ++R
Sbjct: 836 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 940



 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 50/168 (29%), Positives = 86/168 (50%), Gaps = 2/168 (1%)
 Frame = +2

Query: 34  TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLCVRDYGVSDGN 93
           T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   + DY +   +
Sbjct: 59  TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKES 235

Query: 94  VLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLDLADQELVWEG 153
            LHLVLRL     I V+T  GK     V     +  VK +I  K +G +    Q L++ G
Sbjct: 236 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IPPDQQRLIFAG 409

Query: 154 EALEDQRLIEDICKDNDAVIHFLVR-TSDAKVTTKPV-GKDFELSIEA 199
           + LED R + D     ++ +H ++R     ++  K + GK   L +E+
Sbjct: 410 KQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 553



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 27/78 (34%), Positives = 47/78 (59%), Gaps = 1/78 (1%)
 Frame = +2

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 713 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 889

Query: 84  VRDYGVSDGNVLHLVLRL 101
           + DY +   + LHLVLRL
Sbjct: 890 LADYNIQKESTLHLVLRL 943


>TC224594 PIR|S01425|UQMUM polyubiquitin 5 - Arabidopsis thaliana
           {Arabidopsis thaliana;} , partial (80%)
          Length = 1156

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 53/178 (29%), Positives = 92/178 (50%), Gaps = 3/178 (1%)
 Frame = +2

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 290 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 466

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 467 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IP 640

Query: 144 LADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR-TSDAKVTTKPV-GKDFELSIEA 199
              Q L++ G+ LED R + D     ++ +H ++R     ++  K + GK   L +E+
Sbjct: 641 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 814



 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 48/155 (30%), Positives = 82/155 (51%), Gaps = 1/155 (0%)
 Frame = +2

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 518 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 694

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 695 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IP 868

Query: 144 LADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR 178
              Q L++ G+ LED R + D     ++ +H ++R
Sbjct: 869 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 973



 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 2/175 (1%)
 Frame = +2

Query: 27  DSILIYLTVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLCVRD 86
           D  +   T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   + D
Sbjct: 71  DMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLAD 247

Query: 87  YGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLDLAD 146
           Y +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G +    
Sbjct: 248 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IPPDQ 421

Query: 147 QELVWEGEALEDQRLIEDICKDNDAVIHFLVR-TSDAKVTTKPV-GKDFELSIEA 199
           Q L++ G+ LED R + D     ++ +H ++R     ++  K + GK   L +E+
Sbjct: 422 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 586



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 27/78 (34%), Positives = 47/78 (59%), Gaps = 1/78 (1%)
 Frame = +2

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 746 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 922

Query: 84  VRDYGVSDGNVLHLVLRL 101
           + DY +   + LHLVLRL
Sbjct: 923 LADYNIQKESTLHLVLRL 976


>TC203465 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin {Nicotiana
           sylvestris;} , partial (76%)
          Length = 911

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 53/178 (29%), Positives = 92/178 (50%), Gaps = 3/178 (1%)
 Frame = +1

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 265 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 441

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 442 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IP 615

Query: 144 LADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR-TSDAKVTTKPV-GKDFELSIEA 199
              Q L++ G+ LED R + D     ++ +H ++R     ++  K + GK   L +E+
Sbjct: 616 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 789



 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 52/180 (28%), Positives = 91/180 (49%), Gaps = 2/180 (1%)
 Frame = +1

Query: 22  SHHLRDSILIYLTVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDK 81
           +H  +  I +  T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D 
Sbjct: 34  AHRFKMQIFVK-TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDG 207

Query: 82  LCVRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGL 141
             + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G 
Sbjct: 208 RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG- 381

Query: 142 LDLADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR-TSDAKVTTKPV-GKDFELSIEA 199
           +    Q L++ G+ LED R + D     ++ +H ++R     ++  K + GK   L +E+
Sbjct: 382 IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 561



 Score = 65.1 bits (157), Expect = 8e-11
 Identities = 46/141 (32%), Positives = 75/141 (52%), Gaps = 1/141 (0%)
 Frame = +1

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 493 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 669

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 670 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDK-EG-IP 843

Query: 144 LADQELVWEGEALEDQRLIED 164
              Q L++ G+ LED R + D
Sbjct: 844 PDQQRLIFAGKQLEDGRTLAD 906


>TC203313 PIR|S01425|UQMUM polyubiquitin 5 - Arabidopsis thaliana
           {Arabidopsis thaliana;} , complete
          Length = 1377

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 53/178 (29%), Positives = 92/178 (50%), Gaps = 3/178 (1%)
 Frame = +1

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 277 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 453

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 454 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IP 627

Query: 144 LADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR-TSDAKVTTKPV-GKDFELSIEA 199
              Q L++ G+ LED R + D     ++ +H ++R     ++  K + GK   L +E+
Sbjct: 628 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 801



 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 53/178 (29%), Positives = 92/178 (50%), Gaps = 3/178 (1%)
 Frame = +1

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 505 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 681

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 682 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IP 855

Query: 144 LADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR-TSDAKVTTKPV-GKDFELSIEA 199
              Q L++ G+ LED R + D     ++ +H ++R     ++  K + GK   L +E+
Sbjct: 856 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 1029



 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 48/155 (30%), Positives = 82/155 (51%), Gaps = 1/155 (0%)
 Frame = +1

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 733 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 909

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 910 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IP 1083

Query: 144 LADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR 178
              Q L++ G+ LED R + D     ++ +H ++R
Sbjct: 1084PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 1188



 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 55/184 (29%), Positives = 92/184 (49%), Gaps = 9/184 (4%)
 Frame = +1

Query: 25  LRDSILIYL-------TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKEL 77
           L  SIL+ L       T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L
Sbjct: 31  LHRSILLLLKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 210

Query: 78  ARDKLCVRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARK 137
             D   + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K
Sbjct: 211 -EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK 387

Query: 138 GQGLLDLADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR-TSDAKVTTKPV-GKDFEL 195
            +G +    Q L++ G+ LED R + D     ++ +H ++R     ++  K + GK   L
Sbjct: 388 -EG-IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 561

Query: 196 SIEA 199
            +E+
Sbjct: 562 EVES 573



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 27/78 (34%), Positives = 47/78 (59%), Gaps = 1/78 (1%)
 Frame = +1

Query: 25   LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
            LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 961  LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 1137

Query: 84   VRDYGVSDGNVLHLVLRL 101
            + DY +   + LHLVLRL
Sbjct: 1138 LADYNIQKESTLHLVLRL 1191


>TC203627 UP|Q41067 (Q41067) Polyubiquitin, partial (47%)
          Length = 1191

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 53/178 (29%), Positives = 92/178 (50%), Gaps = 3/178 (1%)
 Frame = +3

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 303 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 479

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 480 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IP 653

Query: 144 LADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR-TSDAKVTTKPV-GKDFELSIEA 199
              Q L++ G+ LED R + D     ++ +H ++R     ++  K + GK   L +E+
Sbjct: 654 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 827



 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 48/155 (30%), Positives = 82/155 (51%), Gaps = 1/155 (0%)
 Frame = +3

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 531 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 707

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 708 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IP 881

Query: 144 LADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR 178
              Q L++ G+ LED R + D     ++ +H ++R
Sbjct: 882 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 986



 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 50/168 (29%), Positives = 86/168 (50%), Gaps = 2/168 (1%)
 Frame = +3

Query: 34  TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLCVRDYGVSDGN 93
           T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   + DY +   +
Sbjct: 105 TLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKES 281

Query: 94  VLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLDLADQELVWEG 153
            LHLVLRL     I V+T  GK     V     +  VK +I  K +G +    Q L++ G
Sbjct: 282 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IPPDQQRLIFAG 455

Query: 154 EALEDQRLIEDICKDNDAVIHFLVR-TSDAKVTTKPV-GKDFELSIEA 199
           + LED R + D     ++ +H ++R     ++  K + GK   L +E+
Sbjct: 456 KQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 599



 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = +3

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 759 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 935

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVR 110
           + DY +   + LHLVLRL     I V+
Sbjct: 936 LADYNIQKESTLHLVLRLRGGMQIFVK 1016


>TC214459 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin {Nicotiana
           sylvestris;} , partial (81%)
          Length = 1470

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 53/178 (29%), Positives = 92/178 (50%), Gaps = 3/178 (1%)
 Frame = +3

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 303 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 479

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 480 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IP 653

Query: 144 LADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR-TSDAKVTTKPV-GKDFELSIEA 199
              Q L++ G+ LED R + D     ++ +H ++R     ++  K + GK   L +E+
Sbjct: 654 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 827



 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 48/155 (30%), Positives = 82/155 (51%), Gaps = 1/155 (0%)
 Frame = +3

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 531 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 707

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 708 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IP 881

Query: 144 LADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR 178
              Q L++ G+ LED R + D     ++ +H ++R
Sbjct: 882 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 986



 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 50/168 (29%), Positives = 86/168 (50%), Gaps = 2/168 (1%)
 Frame = +3

Query: 34  TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLCVRDYGVSDGN 93
           T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   + DY +   +
Sbjct: 105 TLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKES 281

Query: 94  VLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLDLADQELVWEG 153
            LHLVLRL     I V+T  GK     V     +  VK +I  K +G +    Q L++ G
Sbjct: 282 TLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IPPDQQRLIFAG 455

Query: 154 EALEDQRLIEDICKDNDAVIHFLVR-TSDAKVTTKPV-GKDFELSIEA 199
           + LED R + D     ++ +H ++R     ++  K + GK   L +E+
Sbjct: 456 KQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 599



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 27/78 (34%), Positives = 47/78 (59%), Gaps = 1/78 (1%)
 Frame = +3

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 759 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 935

Query: 84  VRDYGVSDGNVLHLVLRL 101
           + DY +   + LHLVLRL
Sbjct: 936 LADYNIQKESTLHLVLRL 989


>TC225522 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin {Nicotiana
           sylvestris;} , partial (50%)
          Length = 639

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 48/155 (30%), Positives = 82/155 (51%), Gaps = 1/155 (0%)
 Frame = +3

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 129 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 305

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 306 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IP 479

Query: 144 LADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR 178
              Q L++ G+ LED R + D     ++ +H ++R
Sbjct: 480 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 584



 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 32/92 (34%), Positives = 53/92 (56%), Gaps = 1/92 (1%)
 Frame = +3

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 357 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 533

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGK 115
           + DY +   + LHLVLRL     I V+T  GK
Sbjct: 534 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 629



 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
 Frame = +3

Query: 67  KQKLVFEGKELARDKLCVRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRN 126
           +Q+L+   +  +R    + DY +   + LHLVLRL     I V+T  GK     V     
Sbjct: 27  QQRLILRRESSSRXGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDT 206

Query: 127 VGYVKQQIARKGQGLLDLADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR-TSDAKVT 185
           +  VK +I  K +G +    Q L++ G+ LED R + D     ++ +H ++R     ++ 
Sbjct: 207 IDNVKAKIQDK-EG-IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIF 380

Query: 186 TKPV-GKDFELSIEA 199
            K + GK   L +E+
Sbjct: 381 VKTLTGKTITLEVES 425


>TC203458 GB|AAA34124.1|170354|TOBUBI4A pentameric polyubiquitin {Nicotiana
           sylvestris;} , partial (56%)
          Length = 1048

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 48/155 (30%), Positives = 82/155 (51%), Gaps = 1/155 (0%)
 Frame = +3

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 171 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 347

Query: 84  VRDYGVSDGNVLHLVLRLSDLQAITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLD 143
           + DY +   + LHLVLRL     I V+T  GK     V     +  VK +I  K +G + 
Sbjct: 348 LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IP 521

Query: 144 LADQELVWEGEALEDQRLIEDICKDNDAVIHFLVR 178
              Q L++ G+ LED R + D     ++ +H ++R
Sbjct: 522 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR 626



 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 48/155 (30%), Positives = 80/155 (50%), Gaps = 2/155 (1%)
 Frame = +3

Query: 47  TDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLCVRDYGVSDGNVLHLVLRLSDLQA 106
           +D+I ++K +IQ  +G    +Q+L+F GK+L  D   + DY +   + LHLVLRL     
Sbjct: 12  SDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLADYNIQKESTLHLVLRLRGGMQ 188

Query: 107 ITVRTECGKEFGFYVGKKRNVGYVKQQIARKGQGLLDLADQELVWEGEALEDQRLIEDIC 166
           I V+T  GK     V     +  VK +I  K +G +    Q L++ G+ LED R + D  
Sbjct: 189 IFVKTLTGKTITLEVESSDTIDNVKAKIQDK-EG-IPPDQQRLIFAGKQLEDGRTLADYN 362

Query: 167 KDNDAVIHFLVR-TSDAKVTTKPV-GKDFELSIEA 199
              ++ +H ++R     ++  K + GK   L +E+
Sbjct: 363 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVES 467



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 27/78 (34%), Positives = 47/78 (59%), Gaps = 1/78 (1%)
 Frame = +3

Query: 25  LRDSILIYL-TVGGSVVPMHIMETDSIASMKLRIQTFKGFFVRKQKLVFEGKELARDKLC 83
           LR  + I++ T+ G  + + +  +D+I ++K +IQ  +G    +Q+L+F GK+L  D   
Sbjct: 399 LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRT 575

Query: 84  VRDYGVSDGNVLHLVLRL 101
           + DY +   + LHLVLRL
Sbjct: 576 LADYNIQKESTLHLVLRL 629


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.318    0.138    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,342,728
Number of Sequences: 63676
Number of extensions: 340058
Number of successful extensions: 1595
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of query: 578
length of database: 12,639,632
effective HSP length: 102
effective length of query: 476
effective length of database: 6,144,680
effective search space: 2924867680
effective search space used: 2924867680
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)