
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0039.5
(582 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC203493 similar to UP|Q9M3B0 (Q9M3B0) Pectinesterase-like prote... 657 0.0
TC203506 similar to UP|Q9FK05 (Q9FK05) Pectinesterase, partial (... 585 e-167
TC225075 similar to UP|PME_PRUPE (Q43062) Pectinesterase PPE8B p... 425 e-119
TC208452 similar to UP|Q9FF77 (Q9FF77) Pectinesterase, partial (... 357 8e-99
TC218158 similar to UP|Q7XAF8 (Q7XAF8) Papillar cell-specific pe... 353 1e-97
TC217842 similar to UP|PME2_CITSI (O04887) Pectinesterase 2 prec... 349 2e-96
TC225101 similar to UP|PME_PRUPE (Q43062) Pectinesterase PPE8B p... 347 6e-96
TC217339 homologue to UP|Q8RVX1 (Q8RVX1) Pectin methylesterase p... 335 3e-92
TC224917 similar to GB|AAK32841.1|13605696|AF361829 At2g45220/F4... 206 5e-88
TC230039 homologue to UP|Q9M5J0 (Q9M5J0) Pectin methylesterase i... 314 6e-86
TC225094 similar to UP|PME_PRUPE (Q43062) Pectinesterase PPE8B p... 310 1e-84
TC211743 similar to UP|PME2_CITSI (O04887) Pectinesterase 2 prec... 276 2e-74
TC210310 similar to UP|PME2_CITSI (O04887) Pectinesterase 2 prec... 272 3e-73
TC231406 similar to UP|Q9FF78 (Q9FF78) Pectinesterase, partial (... 267 9e-72
TC231045 similar to UP|Q9M5J0 (Q9M5J0) Pectin methylesterase iso... 261 8e-70
TC214438 similar to UP|Q708X4 (Q708X4) Pectin methylesterase (F... 249 2e-66
CK606276 243 2e-64
TC220076 homologue to UP|PME3_PHAVU (Q43111) Pectinesterase 3 pr... 242 4e-64
TC218157 similar to UP|Q8GUF8 (Q8GUF8) At2g47550/T30B22.15, part... 239 2e-63
CA851330 similar to PIR|T12995|T12 pectinesterase homolog T21L8.... 238 4e-63
>TC203493 similar to UP|Q9M3B0 (Q9M3B0) Pectinesterase-like protein
(At3g49220), partial (59%)
Length = 1298
Score = 657 bits (1695), Expect = 0.0
Identities = 319/384 (83%), Positives = 352/384 (91%), Gaps = 4/384 (1%)
Frame = +1
Query: 203 AGNLKDLSELVSNCLAIF--AGAGDDFSGVPIQNRR-LLAMRDDNFPRWLNRRDRRLLSL 259
+ NLKDLSELVSNCLAIF AGAGDDF+GVPIQNRR L+AMR+DNFP WLN RDRRLLSL
Sbjct: 4 SNNLKDLSELVSNCLAIFSGAGAGDDFAGVPIQNRRRLMAMREDNFPTWLNGRDRRLLSL 183
Query: 260 PVSAMQADVVVSKDGNGTAKTIAEAIKKVPEYGSRRFIIYVRAGRYEENNLKIGRKRTNV 319
P+S +QAD+VVSKDGNGT KTIAEAIKKVPEY SRR IIY+RAGRYEE+NLK+GRK+TNV
Sbjct: 184 PLSQIQADIVVSKDGNGTVKTIAEAIKKVPEYSSRRIIIYIRAGRYEEDNLKLGRKKTNV 363
Query: 320 MIIGDGKGKTVITGGKNVMDGLLTTFHTASFAASGAGFIARDMTFENYAGPEKHQAVALR 379
M IGDGKGKTVITGG+N L TTFHTASFAASG+GFIA+DMTFENYAGP +HQAVALR
Sbjct: 364 MFIGDGKGKTVITGGRNYYQNL-TTFHTASFAASGSGFIAKDMTFENYAGPGRHQAVALR 540
Query: 380 VGADHAVVYRCNVIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSLYARKPM 439
VGADHAVVYRCN+IGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNC+L+ARKPM
Sbjct: 541 VGADHAVVYRCNIIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCTLWARKPM 720
Query: 440 AQQKNTITAQNRKDPNQNTGISIHACRVLAAADLKASNESFETYLGRPWKLYSRTVYMMS 499
AQQKNTITAQNRKDPNQNTGISIH CR++A DL+AS S+ TYLGRPWKLY+RTV+M+S
Sbjct: 721 AQQKNTITAQNRKDPNQNTGISIHNCRIMATPDLEASKGSYPTYLGRPWKLYARTVFMLS 900
Query: 500 YIGDHVHQRGWLEWNT-TFALDTLYYGEYMNYGPGAAVGQRVNWPGYRVITSALEASRFT 558
YIGDHVH RGWLEWNT +FALDT YYGEYMNYGPG+A+GQRVNW GYR I S +EASRFT
Sbjct: 901 YIGDHVHPRGWLEWNTSSFALDTCYYGEYMNYGPGSALGQRVNWAGYRAINSTVEASRFT 1080
Query: 559 VAQFILGATWLPSTGVAFLSGLST 582
V QFI G++WLPSTGVAF++GLST
Sbjct: 1081VGQFISGSSWLPSTGVAFIAGLST 1152
>TC203506 similar to UP|Q9FK05 (Q9FK05) Pectinesterase, partial (57%)
Length = 1320
Score = 585 bits (1509), Expect = e-167
Identities = 277/341 (81%), Positives = 308/341 (90%)
Frame = +2
Query: 242 DDNFPRWLNRRDRRLLSLPVSAMQADVVVSKDGNGTAKTIAEAIKKVPEYGSRRFIIYVR 301
+ FP WLN+RDRRLLSLP+SA+QAD+ VSK GNGT KTIAEAIKK PE+ +RRFIIYVR
Sbjct: 2 EGKFPGWLNKRDRRLLSLPLSAIQADITVSKTGNGTVKTIAEAIKKAPEHSTRRFIIYVR 181
Query: 302 AGRYEENNLKIGRKRTNVMIIGDGKGKTVITGGKNVMDGLLTTFHTASFAASGAGFIARD 361
AGRYEENNLK+GRK+TNVM IGDGKGKTVITG KNV+DG+ TTFH+ASFAASGAGFIARD
Sbjct: 182 AGRYEENNLKVGRKKTNVMFIGDGKGKTVITGKKNVIDGM-TTFHSASFAASGAGFIARD 358
Query: 362 MTFENYAGPEKHQAVALRVGADHAVVYRCNVIGYQDTMYVHSNRQFYRECDIYGTVDFIF 421
+TFENYAGP KHQAVALRVGADHAVVYRCN++GYQD+ YVHSNRQF+REC+IYGTVDFIF
Sbjct: 359 ITFENYAGPAKHQAVALRVGADHAVVYRCNIVGYQDSCYVHSNRQFFRECNIYGTVDFIF 538
Query: 422 GNAAVVFQNCSLYARKPMAQQKNTITAQNRKDPNQNTGISIHACRVLAAADLKASNESFE 481
GNAAVVFQ C++YARKPMAQQKNTITAQNRKDPNQNTGIS+H CR+L A DL SF
Sbjct: 539 GNAAVVFQKCNIYARKPMAQQKNTITAQNRKDPNQNTGISLHNCRILPAPDLAPVKGSFP 718
Query: 482 TYLGRPWKLYSRTVYMMSYIGDHVHQRGWLEWNTTFALDTLYYGEYMNYGPGAAVGQRVN 541
TYLGRPWK YSRTVY++SY+GDH+H RGWLEWN FAL+TLYYGEYMNYGPGAAVGQRV
Sbjct: 719 TYLGRPWKQYSRTVYLVSYMGDHIHPRGWLEWNGDFALNTLYYGEYMNYGPGAAVGQRVQ 898
Query: 542 WPGYRVITSALEASRFTVAQFILGATWLPSTGVAFLSGLST 582
WPGYRVI S +EA+RFTVAQFI G+ WLPSTGVAF +GLST
Sbjct: 899 WPGYRVIKSTMEANRFTVAQFISGSAWLPSTGVAFAAGLST 1021
>TC225075 similar to UP|PME_PRUPE (Q43062) Pectinesterase PPE8B precursor
(Pectin methylesterase) (PE) , partial (87%)
Length = 1744
Score = 425 bits (1093), Expect = e-119
Identities = 238/533 (44%), Positives = 325/533 (60%), Gaps = 15/533 (2%)
Frame = +1
Query: 64 GSGASTLRAKPTQAISNTCSKTRFPSLCVK---SLLDFPGSTAASERDLVHISLNMTFQH 120
G+ +L +P + S T S F ++C + DF GS A + H + ++T +
Sbjct: 1 GTRIPSLINQPQRTPSLTFSFLLFLAICTPLDAAHTDFAGS-ACLKVSPSHFAGSVT-EV 174
Query: 121 LAKALYSSAAISASMDP----RVRAAYDDCLELLDDSVDALGRSLSSF--------AAGS 168
+A ++ +S P R+ A DCL+LLD S D L +LS+ + G+
Sbjct: 175 IAAIRQLASILSRFGSPLANFRLSTAIADCLDLLDLSSDVLSWALSASQNPKGKHNSTGN 354
Query: 169 SSSDVMTWLSAALTNQDTCADGFADTSGDVKDQMAGNLKDLSELVSNCLAIFAGAGDDFS 228
SSD+ TWLSAAL + +TC +GF T+ VK ++ + + LV LA A D F
Sbjct: 355 LSSDLRTWLSAALAHPETCMEGFEGTNSIVKGLVSAGIGQVVSLVEQLLAQVLPAQDQFD 534
Query: 229 GVPIQNRRLLAMRDDNFPRWLNRRDRRLLSLPVSAMQADVVVSKDGNGTAKTIAEAIKKV 288
A FP W+ ++R+LL A+ DV V+ DG+G I +A+
Sbjct: 535 A---------ASSKGQFPSWIKPKERKLLQ--AIAVTPDVTVALDGSGNYAKIMDAVLAA 681
Query: 289 PEYGSRRFIIYVRAGRYEENNLKIGRKRTNVMIIGDGKGKTVITGGKNVMDGLLTTFHTA 348
P+Y +RF+I V+ G Y EN ++I +K+ N+MI+G G TVI+G ++V+DG TTF +A
Sbjct: 682 PDYSMKRFVILVKKGVYVEN-VEIKKKKWNIMILGQGMDATVISGNRSVVDGW-TTFRSA 855
Query: 349 SFAASGAGFIARDMTFENYAGPEKHQAVALRVGADHAVVYRCNVIGYQDTMYVHSNRQFY 408
+FA SG GFIARD++F+N AGPEKHQAVALR +D +V +RC + GYQD++Y H+ RQF+
Sbjct: 856 TFAVSGRGFIARDISFQNTAGPEKHQAVALRSDSDLSVFFRCGIFGYQDSLYTHTMRQFF 1035
Query: 409 RECDIYGTVDFIFGNAAVVFQNCSLYARKPMAQQKNTITAQNRKDPNQNTGISIHACRVL 468
R+C I GTVD+IFG+A VFQNC L +K + QKNTITA RKDPN+ TG S C +
Sbjct: 1036RDCTISGTVDYIFGDATAVFQNCFLRVKKGLPNQKNTITAHGRKDPNEPTGFSFQFCNIT 1215
Query: 469 AAADLKASNESFETYLGRPWKLYSRTVYMMSYIGDHVHQRGWLEWNTTFALDTLYYGEYM 528
A +DL S + +TYLGRPWK YSRTV+M SY+ + + GWLEWN FALDTLYY EYM
Sbjct: 1216ADSDLIPSVGTAQTYLGRPWKSYSRTVFMQSYMSEVIGAEGWLEWNGNFALDTLYYAEYM 1395
Query: 529 NYGPGAAVGQRVNWPGYRVITSALEASRFTVAQFILGATWLPSTGVAFLSGLS 581
N G GA V RV WPGY + + +AS FTV+QFI G WLPSTGV F +GL+
Sbjct: 1396NTGAGAGVANRVKWPGYHALNDSSQASNFTVSQFIEGNLWLPSTGVTFTAGLT 1554
>TC208452 similar to UP|Q9FF77 (Q9FF77) Pectinesterase, partial (56%)
Length = 1273
Score = 357 bits (916), Expect = 8e-99
Identities = 178/316 (56%), Positives = 223/316 (70%), Gaps = 3/316 (0%)
Frame = +1
Query: 268 VVVSKDGNGTAKTIAEAIKKVPEYGSRR---FIIYVRAGRYEENNLKIGRKRTNVMIIGD 324
V+VS G +I +AI P F++YVR G YEE + I +++ N++++GD
Sbjct: 292 VIVSHYGIDNYTSIGDAIAAAPNNTKPEDGYFLVYVREGLYEEY-VVIPKEKKNILLVGD 468
Query: 325 GKGKTVITGGKNVMDGLLTTFHTASFAASGAGFIARDMTFENYAGPEKHQAVALRVGADH 384
G KT+ITG +V+DG TTF++++FA SG FIA D+TF N AGPEKHQAVA+R AD
Sbjct: 469 GINKTIITGNHSVIDGW-TTFNSSTFAVSGERFIAVDVTFRNTAGPEKHQAVAVRNNADL 645
Query: 385 AVVYRCNVIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSLYARKPMAQQKN 444
+ YRC+ GYQDT+YVHS RQFYREC+IYGTVDFIFGNAAVVFQ C +YARKP+ QKN
Sbjct: 646 STFYRCSFEGYQDTLYVHSLRQFYRECEIYGTVDFIFGNAAVVFQGCKIYARKPLPNQKN 825
Query: 445 TITAQNRKDPNQNTGISIHACRVLAAADLKASNESFETYLGRPWKLYSRTVYMMSYIGDH 504
+TAQ R DPNQNTGISI C + AA DL A S ++LGRPWK+YSRTVY+ SYIG+
Sbjct: 826 AVTAQGRTDPNQNTGISIQNCSIDAAPDLVADLNSTMSFLGRPWKVYSRTVYLQSYIGNV 1005
Query: 505 VHQRGWLEWNTTFALDTLYYGEYMNYGPGAAVGQRVNWPGYRVITSALEASRFTVAQFIL 564
+ GWLEWN T LDTL+YGE+ NYGPG+ RV WPGY ++ +A +A FTV F L
Sbjct: 1006IQPAGWLEWNGTVGLDTLFYGEFNNYGPGSNTSNRVTWPGYSLL-NATQAWNFTVLNFTL 1182
Query: 565 GATWLPSTGVAFLSGL 580
G TWLP T + + GL
Sbjct: 1183GNTWLPDTDIPYTEGL 1230
>TC218158 similar to UP|Q7XAF8 (Q7XAF8) Papillar cell-specific pectin
methylesterase-like protein, partial (59%)
Length = 1291
Score = 353 bits (906), Expect = 1e-97
Identities = 181/316 (57%), Positives = 220/316 (69%), Gaps = 3/316 (0%)
Frame = +3
Query: 268 VVVSKDGNGTAKTIAEAIKKVPEYGSRR---FIIYVRAGRYEENNLKIGRKRTNVMIIGD 324
V VS+DG+G TI +AI P F+IYV AG YEEN + I +K+T +M++GD
Sbjct: 153 VTVSQDGSGNFTTINDAIAAAPNKSVSTDGYFLIYVTAGVYEEN-VSIDKKKTYLMMVGD 329
Query: 325 GKGKTVITGGKNVMDGLLTTFHTASFAASGAGFIARDMTFENYAGPEKHQAVALRVGADH 384
G KT+ITG ++V+DG TTF +A+ A G GF+ +MT N AG KHQAVALR GAD
Sbjct: 330 GINKTIITGNRSVVDGW-TTFSSATLAVVGQGFVGVNMTIRNTAGAVKHQAVALRSGADL 506
Query: 385 AVVYRCNVIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSLYARKPMAQQKN 444
+ Y C+ GYQDT+YVHS RQFY ECDIYGTVDFIFGNA VVFQNC +Y R PM+ Q N
Sbjct: 507 STFYSCSFEGYQDTLYVHSLRQFYSECDIYGTVDFIFGNAKVVFQNCKMYPRLPMSGQFN 686
Query: 445 TITAQNRKDPNQNTGISIHACRVLAAADLKASNESFETYLGRPWKLYSRTVYMMSYIGDH 504
ITAQ R DPNQ+TGISIH C + AA DL ASN TYLGRPWK YSRTVYM + +
Sbjct: 687 AITAQGRTDPNQDTGISIHNCTIRAADDLAASN-GVATYLGRPWKEYSRTVYMQTVMDSV 863
Query: 505 VHQRGWLEWNTTFALDTLYYGEYMNYGPGAAVGQRVNWPGYRVITSALEASRFTVAQFIL 564
+H +GW EW+ FAL TLYY EY N GPG+ RV WPGY VI +A +A+ FTV+ F+L
Sbjct: 864 IHAKGWREWDGDFALSTLYYAEYSNSGPGSGTDNRVTWPGYHVI-NATDAANFTVSNFLL 1040
Query: 565 GATWLPSTGVAFLSGL 580
G WLP TGV++ + L
Sbjct: 1041GDDWLPQTGVSYTNNL 1088
>TC217842 similar to UP|PME2_CITSI (O04887) Pectinesterase 2 precursor
(Pectin methylesterase) (PE) , partial (48%)
Length = 1225
Score = 349 bits (896), Expect = 2e-96
Identities = 165/275 (60%), Positives = 205/275 (74%)
Frame = +3
Query: 306 EENNLKIGRKRTNVMIIGDGKGKTVITGGKNVMDGLLTTFHTASFAASGAGFIARDMTFE 365
E+ N+ I R N+MI+GDG G T++TG N +DG TTF +A+FA G GFIARD+TFE
Sbjct: 3 EKENIDIKRTVKNLMIVGDGMGATIVTGNHNAIDGS-TTFRSATFAVDGDGFIARDITFE 179
Query: 366 NYAGPEKHQAVALRVGADHAVVYRCNVIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAA 425
N AGP+KHQAVALR GADH+V YRC+ GYQDT+YV++NRQFYR+CDIYGTVDFIFG+A
Sbjct: 180 NTAGPQKHQAVALRSGADHSVFYRCSFRGYQDTLYVYANRQFYRDCDIYGTVDFIFGDAV 359
Query: 426 VVFQNCSLYARKPMAQQKNTITAQNRKDPNQNTGISIHACRVLAAADLKASNESFETYLG 485
V QNC++Y RKPM+ Q+NT+TAQ R DPN+NTGI IH CR+ AA DLKA SF T+LG
Sbjct: 360 AVLQNCNIYVRKPMSNQQNTVTAQGRTDPNENTGIIIHNCRITAAGDLKAVQGSFRTFLG 539
Query: 486 RPWKLYSRTVYMMSYIGDHVHQRGWLEWNTTFALDTLYYGEYMNYGPGAAVGQRVNWPGY 545
RPW+ YSRTV M S + + GW W+ FAL TLYY E+ N G GA+ G RV+W G+
Sbjct: 540 RPWQKYSRTVVMKSALDGLISPAGWFPWSGNFALSTLYYAEHANTGAGASTGGRVDWAGF 719
Query: 546 RVITSALEASRFTVAQFILGATWLPSTGVAFLSGL 580
RVI+S EA +FTV F+ G +W+P +GV F GL
Sbjct: 720 RVISST-EAVKFTVGNFLAGGSWIPGSGVPFDEGL 821
>TC225101 similar to UP|PME_PRUPE (Q43062) Pectinesterase PPE8B precursor
(Pectin methylesterase) (PE) , partial (64%)
Length = 1177
Score = 347 bits (891), Expect = 6e-96
Identities = 168/303 (55%), Positives = 217/303 (71%), Gaps = 3/303 (0%)
Frame = +3
Query: 281 IAEAIKKVPEYGSRRFIIYVRAGRYEENNLKIGRKRTNVMIIGDGKGKTVITGGKNVMDG 340
+ +A+ P Y +R++I+++ G Y EN ++I +K+ N+M++GDG T+I+G ++ +DG
Sbjct: 228 VMDAVLAAPNYSMQRYVIHIKRGVYYEN-VEIKKKKWNLMMVGDGMDATIISGNRSFIDG 404
Query: 341 LLTTFHTASFAASGAGFIARDMTFENYAGPEKHQAVALRVGADHAVVYRCNVIGYQDTMY 400
TTF +A+FA SG GFIARD+TF+N AGPEKHQAVALR +D +V +RC + GYQD++Y
Sbjct: 405 W-TTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFFRCGIFGYQDSLY 581
Query: 401 VHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSLYARKPMAQQKNTITAQNRKDPNQNTGI 460
H+ RQFYREC I GTVDFIFG+A +FQNC + A+K + QKNTITA RK+P++ TG
Sbjct: 582 THTMRQFYRECKISGTVDFIFGDATAIFQNCHISAKKGLPNQKNTITAHGRKNPDEPTGF 761
Query: 461 SIHACRVLAAADL---KASNESFETYLGRPWKLYSRTVYMMSYIGDHVHQRGWLEWNTTF 517
SI C + A DL S S TYLGRPWK YSRT++M SYI D + GWLEWN F
Sbjct: 762 SIQFCNISADYDLVNSVNSCNSTHTYLGRPWKPYSRTIFMQSYISDVLRPEGWLEWNGDF 941
Query: 518 ALDTLYYGEYMNYGPGAAVGQRVNWPGYRVITSALEASRFTVAQFILGATWLPSTGVAFL 577
ALDTLYY EYMNYGPGA V RV W GY V+ + +AS FTV+QFI G LPSTGV F
Sbjct: 942 ALDTLYYAEYMNYGPGAGVANRVKWQGYHVMNDSSQASNFTVSQFIEGNLCLPSTGVTFT 1121
Query: 578 SGL 580
+GL
Sbjct: 1122AGL 1130
>TC217339 homologue to UP|Q8RVX1 (Q8RVX1) Pectin methylesterase precursor,
partial (48%)
Length = 923
Score = 335 bits (860), Expect = 3e-92
Identities = 164/268 (61%), Positives = 197/268 (73%), Gaps = 2/268 (0%)
Frame = +1
Query: 315 KRTNVMIIGDGKGKTVITGGKNVMDGLLTTFHTASFAASGAGFIARDMTFENYAGPEKHQ 374
++TNVM++GDGK TVITG N +DG TTF TA+ AA G GFIA+D+ F+N AGP+KHQ
Sbjct: 1 EKTNVMLVGDGKDATVITGNLNFIDGT-TTFKTATVAAVGDGFIAQDIWFQNTAGPQKHQ 177
Query: 375 AVALRVGADHAVVYRCNVIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSLY 434
AVALRVGAD +V+ RC + +QDT+Y HSNRQFYR+ I GTVDFIFGNAAVVFQ C L
Sbjct: 178 AVALRVGADQSVINRCRIDAFQDTLYAHSNRQFYRDSFITGTVDFIFGNAAVVFQKCDLV 357
Query: 435 ARKPMAQQKNTITAQNRKDPNQNTGISIHACRVLAAADLKASNESFETYLGRPWKLYSRT 494
ARKPM +Q N +TAQ R+DPNQNTG SI C + ++DLK S +T+LGRPWK YSRT
Sbjct: 358 ARKPMDKQNNMVTAQGREDPNQNTGTSIQQCNLTPSSDLKPVVGSIKTFLGRPWKKYSRT 537
Query: 495 VYMMSYIGDHVHQRGWLEWNTTFA--LDTLYYGEYMNYGPGAAVGQRVNWPGYRVITSAL 552
V M S + H+ GW EW+ L TLYYGEYMN GPGA +RVNWPGY +I +A
Sbjct: 538 VVMQSTLDSHIDPTGWAEWDAQSKDFLQTLYYGEYMNNGPGAGTSKRVNWPGYHIIKTAA 717
Query: 553 EASRFTVAQFILGATWLPSTGVAFLSGL 580
EAS+FTVAQ I G WL +TGV F+ GL
Sbjct: 718 EASKFTVAQLIQGNVWLKNTGVNFIEGL 801
>TC224917 similar to GB|AAK32841.1|13605696|AF361829 At2g45220/F4L23.27
{Arabidopsis thaliana;} , partial (69%)
Length = 1483
Score = 206 bits (523), Expect(2) = 5e-88
Identities = 124/335 (37%), Positives = 194/335 (57%), Gaps = 3/335 (0%)
Frame = +2
Query: 78 ISNTCSKTRFPSLCVKSLLDFP-GSTAASERDLVHISLNMTFQHLAKALYSSAAISASM- 135
I + C++T +P C L + S+ D + +SL + + ++ ++ A+
Sbjct: 200 IQSWCNQTPYPQPCEYYLTNHAFNKPIKSKSDFLKVSLQLALERAQRSELNTHALGPKCR 379
Query: 136 DPRVRAAYDDCLELLDDSVDALGRSLSSFAAGSSSSDVMTWLSAALTNQDTCADGFADTS 195
+ +AA+ DCL+L + ++ L ++++ + +D TWLS ALTN +TC +GF +
Sbjct: 380 NVHEKAAWADCLQLYEYTIQRLNKTINPNTK-CNQTDTQTWLSTALTNLETCKNGFYELG 556
Query: 196 GDVKDQMAGNLKD-LSELVSNCLAIFAGAGDDFSGVPIQNRRLLAMRDDNFPRWLNRRDR 254
V D + + + +++L+SN L++ G P Q + + FP W+ DR
Sbjct: 557 --VPDYVLPLMSNNVTKLLSNTLSLNKG--------PYQYKP--PSYKEGFPTWVKPGDR 700
Query: 255 RLLSLPVSAMQADVVVSKDGNGTAKTIAEAIKKVPEYGSRRFIIYVRAGRYEENNLKIGR 314
+LL A A+VVV+KDG+G T+ A+ P+ S R++IYV++G Y E ++
Sbjct: 701 KLLQSSSVASNANVVVAKDGSGKYTTVKAAVDAAPKSSSGRYVIYVKSGVYNE---QVEV 871
Query: 315 KRTNVMIIGDGKGKTVITGGKNVMDGLLTTFHTASFAASGAGFIARDMTFENYAGPEKHQ 374
K N+M++GDG GKT+ITG K+V G TTF +A+ AA G GFIA+D+TF N AG HQ
Sbjct: 872 KGNNIMLVGDGIGKTIITGSKSVGGGT-TTFRSATVAAVGDGFIAQDITFRNTAGAANHQ 1048
Query: 375 AVALRVGADHAVVYRCNVIGYQDTMYVHSNRQFYR 409
AVA R G+D +V YRC+ G+QDT+YVHS RQFYR
Sbjct: 1049AVAFRSGSDLSVFYRCSFEGFQDTLYVHSERQFYR 1153
Score = 137 bits (346), Expect(2) = 5e-88
Identities = 66/112 (58%), Positives = 82/112 (72%)
Frame = +3
Query: 410 ECDIYGTVDFIFGNAAVVFQNCSLYARKPMAQQKNTITAQNRKDPNQNTGISIHACRVLA 469
ECDIYGTVDFIFGNAA V QNC++YAR P Q+ T+TAQ R DPNQNTGI IH +V
Sbjct: 1155 ECDIYGTVDFIFGNAAAVLQNCNIYARTP-PQRTITVTAQGRTDPNQNTGIIIHNSKVTG 1331
Query: 470 AADLKASNESFETYLGRPWKLYSRTVYMMSYIGDHVHQRGWLEWNTTFALDT 521
A+ S S ++YLGRPW+ YSRTV+M +Y+ ++ GW+EW+ FALDT
Sbjct: 1332 ASGFNPS--SVKSYLGRPWQKYSRTVFMKTYLDSLINPAGWMEWDGNFALDT 1481
>TC230039 homologue to UP|Q9M5J0 (Q9M5J0) Pectin methylesterase isoform alpha
(Fragment) , partial (70%)
Length = 913
Score = 314 bits (805), Expect = 6e-86
Identities = 159/306 (51%), Positives = 208/306 (67%), Gaps = 2/306 (0%)
Frame = +1
Query: 194 TSGDVKDQMAGNLKDLSELVSNCLAIFAGAGDDFSGVPIQNRRL--LAMRDDNFPRWLNR 251
+ G V+D+ L ++S VSN LA+ + +N D FP WL+
Sbjct: 1 SKGHVRDRFEEGLLEISHHVSNSLAMLKKLPAGVKKLASKNEVFPGYGKIKDGFPTWLST 180
Query: 252 RDRRLLSLPVSAMQADVVVSKDGNGTAKTIAEAIKKVPEYGSRRFIIYVRAGRYEENNLK 311
+DR+LL V+ +++V+KDG G TIAEA+ P + RF+I+++AG Y EN ++
Sbjct: 181 KDRKLLQAAVNETNFNLLVAKDGTGNFTTIAEAVAVAPNSSATRFVIHIKAGAYFEN-VE 357
Query: 312 IGRKRTNVMIIGDGKGKTVITGGKNVMDGLLTTFHTASFAASGAGFIARDMTFENYAGPE 371
+ RK+TN+M +GDG GKTV+ +NV+DG TTF +A+ A G GFIA+ +TFEN AGP
Sbjct: 358 VIRKKTNLMFVGDGIGKTVVKASRNVVDGW-TTFQSATVAVVGDGFIAKGITFENSAGPS 534
Query: 372 KHQAVALRVGADHAVVYRCNVIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNC 431
KHQAVALR G+D + Y+C+ + YQDT+YVHS RQFYR+CD+YGTVDFIFGNAA V QNC
Sbjct: 535 KHQAVALRSGSDFSAFYKCSFVAYQDTLYVHSLRQFYRDCDVYGTVDFIFGNAATVLQNC 714
Query: 432 SLYARKPMAQQKNTITAQNRKDPNQNTGISIHACRVLAAADLKASNESFETYLGRPWKLY 491
+LYARKP Q+N TAQ R+DPNQNTGISI C+V AAADL F+ YLGRPWK Y
Sbjct: 715 NLYARKPNENQRNLFTAQGREDPNQNTGISILNCKVAAAADLIPVKSQFKNYLGRPWKKY 894
Query: 492 SRTVYM 497
SRTVY+
Sbjct: 895 SRTVYL 912
>TC225094 similar to UP|PME_PRUPE (Q43062) Pectinesterase PPE8B precursor
(Pectin methylesterase) (PE) , partial (47%)
Length = 919
Score = 310 bits (793), Expect = 1e-84
Identities = 146/251 (58%), Positives = 182/251 (72%)
Frame = +3
Query: 330 VITGGKNVMDGLLTTFHTASFAASGAGFIARDMTFENYAGPEKHQAVALRVGADHAVVYR 389
+I+G ++V+DG TTF +A+FA SG GFIARD++F+N AGPEKHQAVALR D +V +R
Sbjct: 3 IISGNRSVVDGW-TTFRSATFAVSGRGFIARDISFQNTAGPEKHQAVALRSDTDLSVFFR 179
Query: 390 CNVIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSLYARKPMAQQKNTITAQ 449
C + GYQD++Y H+ RQF+REC I GTVD+IFG+A VFQNC L +K + QKNTITA
Sbjct: 180 CGIFGYQDSLYTHTMRQFFRECTITGTVDYIFGDATAVFQNCFLRVKKGLPNQKNTITAH 359
Query: 450 NRKDPNQNTGISIHACRVLAAADLKASNESFETYLGRPWKLYSRTVYMMSYIGDHVHQRG 509
RKDPN+ TG S C + A +DL S ++YLGRPWK YSRTV+M SY+ + + G
Sbjct: 360 GRKDPNEPTGFSFQFCNITADSDLVPWVSSTQSYLGRPWKSYSRTVFMQSYMSEVIRGEG 539
Query: 510 WLEWNTTFALDTLYYGEYMNYGPGAAVGQRVNWPGYRVITSALEASRFTVAQFILGATWL 569
WLEWN FAL+TLYYGEYMN G GA + RV WPGY + +AS FTVAQFI G WL
Sbjct: 540 WLEWNGNFALETLYYGEYMNTGAGAGLANRVKWPGYHPFNDSNQASNFTVAQFIEGNLWL 719
Query: 570 PSTGVAFLSGL 580
PSTGV + +GL
Sbjct: 720 PSTGVTYTAGL 752
>TC211743 similar to UP|PME2_CITSI (O04887) Pectinesterase 2 precursor
(Pectin methylesterase) (PE) , partial (39%)
Length = 601
Score = 276 bits (705), Expect = 2e-74
Identities = 134/204 (65%), Positives = 157/204 (76%)
Frame = +2
Query: 360 RDMTFENYAGPEKHQAVALRVGADHAVVYRCNVIGYQDTMYVHSNRQFYRECDIYGTVDF 419
+D+TF N AG HQAVALR G+D +V YRC+ GYQDT+YV+S+RQFYRECDIYGTVDF
Sbjct: 2 QDITFRNTAGATNHQAVALRSGSDLSVFYRCSFEGYQDTLYVYSDRQFYRECDIYGTVDF 181
Query: 420 IFGNAAVVFQNCSLYARKPMAQQKNTITAQNRKDPNQNTGISIHACRVLAAADLKASNES 479
IFGNAAVVFQNC++YAR P + NTITAQ R DPNQNTGISIH +V AA+DL
Sbjct: 182 IFGNAAVVFQNCNIYARNP-PNKVNTITAQGRTDPNQNTGISIHNSKVTAASDLM----G 346
Query: 480 FETYLGRPWKLYSRTVYMMSYIGDHVHQRGWLEWNTTFALDTLYYGEYMNYGPGAAVGQR 539
TYLGRPW+ YSRTV+M +Y+ ++ GWLEW+ FAL TLYYGEYMN GPG++ R
Sbjct: 347 VRTYLGRPWQQYSRTVFMKTYLDSLINPEGWLEWSGNFALSTLYYGEYMNTGPGSSTANR 526
Query: 540 VNWPGYRVITSALEASRFTVAQFI 563
VNW GY VITSA EAS+FTV FI
Sbjct: 527 VNWLGYHVITSASEASKFTVGNFI 598
>TC210310 similar to UP|PME2_CITSI (O04887) Pectinesterase 2 precursor
(Pectin methylesterase) (PE) , partial (38%)
Length = 678
Score = 272 bits (695), Expect = 3e-73
Identities = 129/198 (65%), Positives = 152/198 (76%)
Frame = +1
Query: 383 DHAVVYRCNVIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSLYARKPMAQQ 442
D +V Y+C+ GYQDT+YVHS RQFYREC+IYGTVDFIFGNAAVV QNC+++AR P +
Sbjct: 1 DLSVFYKCSFEGYQDTLYVHSERQFYRECNIYGTVDFIFGNAAVVLQNCNIFARNP-PNK 177
Query: 443 KNTITAQNRKDPNQNTGISIHACRVLAAADLKASNESFETYLGRPWKLYSRTVYMMSYIG 502
NTITAQ R DPNQNTGISIH RV AA+DL+ S TYLGRPWK YSRTV+M +Y+
Sbjct: 178 VNTITAQGRTDPNQNTGISIHNSRVTAASDLRPVQNSVRTYLGRPWKQYSRTVFMKTYLD 357
Query: 503 DHVHQRGWLEWNTTFALDTLYYGEYMNYGPGAAVGQRVNWPGYRVITSALEASRFTVAQF 562
++ GW+EW+ FALDTLYYGEYMN GPG++ +RV W GYRVITSA EAS+F+VA F
Sbjct: 358 GLINPAGWMEWSGNFALDTLYYGEYMNTGPGSSTARRVKWSGYRVITSASEASKFSVANF 537
Query: 563 ILGATWLPSTGVAFLSGL 580
I G WLPST V F L
Sbjct: 538 IAGNAWLPSTKVPFTPSL 591
>TC231406 similar to UP|Q9FF78 (Q9FF78) Pectinesterase, partial (35%)
Length = 851
Score = 267 bits (683), Expect = 9e-72
Identities = 132/237 (55%), Positives = 159/237 (66%)
Frame = +2
Query: 344 TFHTASFAASGAGFIARDMTFENYAGPEKHQAVALRVGADHAVVYRCNVIGYQDTMYVHS 403
TF TA+FA G FIARDM F N AGP+K QAVAL AD AV YRC + +QD++Y HS
Sbjct: 20 TFSTATFAVFGRNFIARDMGFRNTAGPQKQQAVALMTSADQAVYYRCQIDAFQDSLYAHS 199
Query: 404 NRQFYRECDIYGTVDFIFGNAAVVFQNCSLYARKPMAQQKNTITAQNRKDPNQNTGISIH 463
NRQFYREC+IYGTVDFIFGN+AVV QNC++ R PM Q+N ITAQ + DPN NTGISI
Sbjct: 200 NRQFYRECNIYGTVDFIFGNSAVVLQNCNIMPRVPMQGQQNPITAQGKTDPNMNTGISIQ 379
Query: 464 ACRVLAAADLKASNESFETYLGRPWKLYSRTVYMMSYIGDHVHQRGWLEWNTTFALDTLY 523
C + DL S +TYLGRPWK YS V+M S +G +H GWL W A DT++
Sbjct: 380 NCNITPFGDL----SSVKTYLGRPWKNYSTPVFM*SPMGIFIHPNGWLPWVGNSAPDTIF 547
Query: 524 YGEYMNYGPGAAVGQRVNWPGYRVITSALEASRFTVAQFILGATWLPSTGVAFLSGL 580
Y E+ N GPGA+ RVNW G RVIT +AS FTV F+ G W+ ++G F S +
Sbjct: 548 YAEFQNVGPGASTKNRVNWKGLRVITRK-QASMFTVKAFLSGERWITASGAPFKSSI 715
>TC231045 similar to UP|Q9M5J0 (Q9M5J0) Pectin methylesterase isoform alpha
(Fragment) , partial (69%)
Length = 747
Score = 261 bits (666), Expect = 8e-70
Identities = 122/194 (62%), Positives = 140/194 (71%)
Frame = +2
Query: 388 YRCNVIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSLYARKPMAQQKNTIT 447
Y+C + YQD VHS RQFYR+CD+YGTVDF GNAA V QNC+LYARKP Q+N T
Sbjct: 2 YKCXFVXYQDXXXVHSXRQFYRDCDVYGTVDFXXGNAATVLQNCNLYARKPNENQRNLFT 181
Query: 448 AQNRKDPNQNTGISIHACRVLAAADLKASNESFETYLGRPWKLYSRTVYMMSYIGDHVHQ 507
AQ R+DPNQNTGISI C+V AAADL F+ YLGRPWK YSRTVY+ SY+ D +
Sbjct: 182 AQGREDPNQNTGISILNCKVAAAADLIPVKSQFKNYLGRPWKKYSRTVYLNSYMEDLIDP 361
Query: 508 RGWLEWNTTFALDTLYYGEYMNYGPGAAVGQRVNWPGYRVITSALEASRFTVAQFILGAT 567
+GWLEWN TFALDTLYYGEY N GPG+ RV WPGYRVI +A EA++FTV FI G
Sbjct: 362 KGWLEWNGTFALDTLYYGEYNNRGPGSNTSARVTWPGYRVIKNATEANQFTVRNFIQGNE 541
Query: 568 WLPSTGVAFLSGLS 581
WL ST + F S S
Sbjct: 542 WLSSTDIPFFSDFS 583
>TC214438 similar to UP|Q708X4 (Q708X4) Pectin methylesterase (Fragment) ,
partial (49%)
Length = 1026
Score = 249 bits (637), Expect = 2e-66
Identities = 119/207 (57%), Positives = 147/207 (70%)
Frame = +3
Query: 374 QAVALRVGADHAVVYRCNVIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSL 433
QAVALRVG D + + C+++ +QDT+YVH+NRQF+ +C I GTVDFIFGN+AVVFQ+C +
Sbjct: 6 QAVALRVGGDLSAFFNCDILAFQDTLYVHNNRQFFEKCLIAGTVDFIFGNSAVVFQDCDI 185
Query: 434 YARKPMAQQKNTITAQNRKDPNQNTGISIHACRVLAAADLKASNESFETYLGRPWKLYSR 493
+AR P + QKN +TAQ R DPNQNTGI I CR+ A DL++ ++F+TYLGRPWK YSR
Sbjct: 186 HARLPSSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATNDLESVKKNFKTYLGRPWKEYSR 365
Query: 494 TVYMMSYIGDHVHQRGWLEWNTTFALDTLYYGEYMNYGPGAAVGQRVNWPGYRVITSALE 553
TV M S I D + GW EW+ FAL TL Y EY N GPGA RV W GY+VIT A E
Sbjct: 366 TVIMQSSISDVIDPIGWHEWSGNFALSTLVYREYQNTGPGAGTSNRVTWKGYKVITDAAE 545
Query: 554 ASRFTVAQFILGATWLPSTGVAFLSGL 580
A +T FI G++WL STG F GL
Sbjct: 546 ARDYTPGSFIGGSSWLGSTGFPFSLGL 626
>CK606276
Length = 751
Score = 243 bits (620), Expect = 2e-64
Identities = 117/205 (57%), Positives = 143/205 (69%), Gaps = 3/205 (1%)
Frame = +1
Query: 379 RVGADHAVVYRCNVIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSLYARKP 438
R GAD + Y C+ GYQDT+YVHS RQFY+ CDIYGTVDFIFGNAA + Q+C++Y R P
Sbjct: 1 RNGADMSTFYNCSFEGYQDTLYVHSLRQFYKSCDIYGTVDFIFGNAAALLQDCNMYPRLP 180
Query: 439 MAQQKNTITAQNRKDPNQNTGISIHACRVLAAADLKASNESF---ETYLGRPWKLYSRTV 495
M Q N ITAQ R DPNQNTGISI C ++AA+DL + ++ +TYLGRPWK YSRTV
Sbjct: 181 MQNQFNAITAQGRTDPNQNTGISIQNCCIIAASDLGDATNNYNGIKTYLGRPWKEYSRTV 360
Query: 496 YMMSYIGDHVHQRGWLEWNTTFALDTLYYGEYMNYGPGAAVGQRVNWPGYRVITSALEAS 555
YM S+I + +GW EW+ FAL TLYY E+ N+GPG+ RV W GY +I +A
Sbjct: 361 YMQSFIDGLIDPKGWNEWSGDFALSTLYYAEFANWGPGSNTSNRVAWEGYHLIDEK-DAD 537
Query: 556 RFTVAQFILGATWLPSTGVAFLSGL 580
FTV +FI G WLP TGV F +GL
Sbjct: 538 DFTVHKFIQGEKWLPQTGVPFXAGL 612
>TC220076 homologue to UP|PME3_PHAVU (Q43111) Pectinesterase 3 precursor
(Pectin methylesterase 3) (PE 3) , partial (39%)
Length = 808
Score = 242 bits (617), Expect = 4e-64
Identities = 122/231 (52%), Positives = 149/231 (63%), Gaps = 1/231 (0%)
Frame = +2
Query: 351 AASGAGFIARDMTFENYAGPEKHQAVALRVGADHAVVYRCNVIGYQDTMYVHSNRQFYRE 410
A G GFIA+D+ F N AG KHQAVA R G+D +V +RC+ G+QDT+Y HSNRQFYR+
Sbjct: 80 AVKGKGFIAKDIGFVNNAGASKHQAVAFRSGSDRSVFFRCSFNGFQDTLYAHSNRQFYRD 259
Query: 411 CDIYGTVDFIFGNAAVVFQNCSLYARKPMAQQKNTITAQNRKDPNQNTGISIHACRVLAA 470
CDI GT+DFIFGNAA VFQNC + R+P+ Q NTITAQ +KD NQNTGI I +
Sbjct: 260 CDITGTIDFIFGNAAAVFQNCKIMPRQPLPNQFNTITAQGKKDRNQNTGIIIQKSKFTPL 439
Query: 471 ADLKASNESFETYLGRPWKLYSRTVYMMSYIGDHVHQRGWLEW-NTTFALDTLYYGEYMN 529
+N + TYLGRPWK +S TV M S IG + GW+ W + T++Y EY N
Sbjct: 440 ----ENNLTAPTYLGRPWKDFSTTVIMQSDIGSFLKPVGWMSWVPNVEPVSTIFYAEYQN 607
Query: 530 YGPGAAVGQRVNWPGYRVITSALEASRFTVAQFILGATWLPSTGVAFLSGL 580
GPGA V QRV W GY+ + EA +FTV FI G WLP+ V F S L
Sbjct: 608 TGPGADVSQRVKWAGYKPTLTDGEAGKFTVQSFIQGPEWLPNAAVQFDSTL 760
>TC218157 similar to UP|Q8GUF8 (Q8GUF8) At2g47550/T30B22.15, partial (49%)
Length = 748
Score = 239 bits (611), Expect = 2e-63
Identities = 115/187 (61%), Positives = 136/187 (72%)
Frame = +1
Query: 394 GYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSLYARKPMAQQKNTITAQNRKD 453
GYQDT+YVHS RQFY EC GTVDFIFGNA VVFQNC++Y R PM+ Q N ITAQ R D
Sbjct: 4 GYQDTLYVHSLRQFYSECXXXGTVDFIFGNAKVVFQNCNMYPRLPMSGQFNAITAQGRTD 183
Query: 454 PNQNTGISIHACRVLAAADLKASNESFETYLGRPWKLYSRTVYMMSYIGDHVHQRGWLEW 513
PNQ+TGISIH + AA DL +SN TYLGRPWK YSRTVYM +++ +H +GW EW
Sbjct: 184 PNQDTGISIHNSTIRAADDLASSN-GVATYLGRPWKEYSRTVYMQTFMDSVIHAKGWREW 360
Query: 514 NTTFALDTLYYGEYMNYGPGAAVGQRVNWPGYRVITSALEASRFTVAQFILGATWLPSTG 573
+ FAL TLYY EY N GPG+ RV WPGY VI +A +AS FTV+ F+LG WLP TG
Sbjct: 361 DGDFALSTLYYAEYSNSGPGSGTDNRVTWPGYHVI-NATDASNFTVSNFLLGDDWLPQTG 537
Query: 574 VAFLSGL 580
V++ + L
Sbjct: 538 VSYTNNL 558
>CA851330 similar to PIR|T12995|T12 pectinesterase homolog T21L8.150 -
Arabidopsis thaliana, partial (37%)
Length = 700
Score = 238 bits (608), Expect = 4e-63
Identities = 118/231 (51%), Positives = 161/231 (69%), Gaps = 1/231 (0%)
Frame = +2
Query: 272 KDGNGTAKTIAEAIKKVPEYGSR-RFIIYVRAGRYEENNLKIGRKRTNVMIIGDGKGKTV 330
K G+G KT+ +A+ + + RF+I+V+ G Y EN +++ N+M++GDG T+
Sbjct: 8 KXGSGNFKTVQDALNAAAKRKEKTRFVIHVKKGVYREN-IEVALHNDNIMLVGDGLRNTI 184
Query: 331 ITGGKNVMDGLLTTFHTASFAASGAGFIARDMTFENYAGPEKHQAVALRVGADHAVVYRC 390
IT ++V DG TT+ +A+ G FIARD+TF+N AG K QAVALR +D +V YRC
Sbjct: 185 ITSARSVQDGY-TTYSSATAGIDGLHFIARDITFQNSAGVHKGQAVALRSASDLSVFYRC 361
Query: 391 NVIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSLYARKPMAQQKNTITAQN 450
++GYQDT+ H+ RQFYR+C IYGTVDFIFGNAAVVFQNC ++AR+P+ Q N ITAQ
Sbjct: 362 GIMGYQDTLMAHAQRQFYRQCYIYGTVDFIFGNAAVVFQNCYIFARRPLEGQANMITAQG 541
Query: 451 RKDPNQNTGISIHACRVLAAADLKASNESFETYLGRPWKLYSRTVYMMSYI 501
R DP QNTGISIH ++ AA DLK + + T+LGRPW+ YSR V M +++
Sbjct: 542 RGDPFQNTGISIHNSQIRAAPDLKPVVDKYNTFLGRPWQQYSRVVVMKTFM 694
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.133 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,978,165
Number of Sequences: 63676
Number of extensions: 292795
Number of successful extensions: 1646
Number of sequences better than 10.0: 136
Number of HSP's better than 10.0 without gapping: 1523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of query: 582
length of database: 12,639,632
effective HSP length: 102
effective length of query: 480
effective length of database: 6,144,680
effective search space: 2949446400
effective search space used: 2949446400
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0039.5