
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0039.1
(821 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CO985160 57 3e-08
TC213885 weakly similar to UP|Q9VUB7 (Q9VUB7) CG32133-PA, partia... 52 1e-06
TC213615 similar to UP|Q9SUL7 (Q9SUL7) SNF1 like protein kinase ... 50 4e-06
TC222945 homologue to UP|Q8VAG3 (Q8VAG3) Wsv453 (WSSV513), parti... 49 9e-06
TC228914 similar to UP|DAH1_MOUSE (Q9QYB2) Dachshund homolog 1 (... 48 2e-05
TC216484 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabin... 48 2e-05
TC228611 weakly similar to GB|CAA72487.1|1890317|ATP26A peroxida... 47 3e-05
TC206176 weakly similar to UP|Q8LPA7 (Q8LPA7) Cold shock protein... 46 8e-05
TC227575 UP|PHYB_SOYBN (P42499) Phytochrome B, complete 45 1e-04
TC228913 weakly similar to UP|Q8IP68 (Q8IP68) CG31813-PA, partia... 44 3e-04
TC219334 weakly similar to UP|Q9FUZ9 (Q9FUZ9) SKP1 interacting p... 43 5e-04
TC225559 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expr... 43 5e-04
TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like ara... 43 6e-04
TC216231 similar to UP|Q41188 (Q41188) Glycine-rich protein 2 (G... 42 8e-04
TC215140 similar to GB|AAL32703.1|17065098|AY062625 nucleotide s... 42 8e-04
CO981213 42 0.001
TC228567 42 0.001
AI959820 similar to GP|14335118|gb| At1g30200/F12P21_1 {Arabidop... 42 0.001
TC215011 UP|Q9MAX8 (Q9MAX8) Epsilon1-COP, complete 41 0.002
TC214476 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 pr... 41 0.002
>CO985160
Length = 777
Score = 57.0 bits (136), Expect = 3e-08
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Frame = -1
Query: 312 AEGAQAPKRRRLVKGSSASSSNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTA 371
A A A ++A+SS P T ++ A A S+A ++ +S+ + T+
Sbjct: 708 ASSAVATTAAATSHATTATSSAPTTAATTSSAAAAAAATSSAPTTAATTSSAAAAAATTS 529
Query: 372 EASAAAATELVTVTTLDS----AAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATT 427
A+AAAAT T + AA AT AA+ A T+T+ P+T +AA+A T
Sbjct: 528 SAAAAAATTSSAATAAATGPAAAACAAATAAASANPATAAATSTSTTPTTTATAAASAVT 349
Query: 428 CSGAAAGDKERETEKENPKSPPRQVT 453
+ AAA + S PR VT
Sbjct: 348 ATAAAAATDGWVRNGSSLCSRPRAVT 271
Score = 56.6 bits (135), Expect = 4e-08
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Frame = -1
Query: 327 SSASSSNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEASAAAATE-----L 381
++A++++ A+PTAA+ A AA+T+ ++ SS T+ ++ A+AAAAT
Sbjct: 750 TNAATTSADAKPTAASSAVATTAAATSHATTATSSAPTTAATTSSAAAAAAATSSAPTTA 571
Query: 382 VTVTTLDSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAA 432
T ++ +AA T++ AAA TT A T A P+ A +AA A + A
Sbjct: 570 ATTSSAAAAAATTSSAAAAAATTSSAATAAATGPAAAACAAATAAASANPA 418
Score = 31.2 bits (69), Expect = 1.9
Identities = 30/104 (28%), Positives = 46/104 (43%), Gaps = 1/104 (0%)
Frame = -1
Query: 327 SSASSSNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEASAAAATELVTVTT 386
+S++++ P AAA A AAS ++ +ST T PT A+AAA
Sbjct: 504 TSSAATAAATGPAAAACAAATAAASANPATAAATSTSTT---PTTTATAAA--------- 361
Query: 387 LDSAAVGTATGAAAK-FTTIGATTTTADQPSTAGISAAAATTCS 429
SA TA AA + G++ + + TAG + + T S
Sbjct: 360 --SAVTATAAAAATDGWVRNGSSLCSRPRAVTAGFAGTSFITGS 235
Score = 30.4 bits (67), Expect = 3.3
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = +2
Query: 340 AAAVAKGKKAASTAAIASSKSSTDGTSQLPTAE--ASAAAATELVTVTTLDSAAVGTATG 397
AAAVA + AA+ +A++ ++ + + AE +AAAA E V + + V A
Sbjct: 434 AAAVAAAQ-AAAAGPVAAAVAAEEVVAAAAAAEEVVAAAAAAEEVVAAVVGAEEVAAAAA 610
Query: 398 AAAKFTTIGATTTTADQPSTAG--ISAAAATTCSGAAAG 434
AA + + A A++ + ++AA T AA G
Sbjct: 611 AAEE---VVAAVVGAEEVAVVACEVAAAVVATAEDAAVG 718
>TC213885 weakly similar to UP|Q9VUB7 (Q9VUB7) CG32133-PA, partial (4%)
Length = 540
Score = 52.0 bits (123), Expect = 1e-06
Identities = 38/108 (35%), Positives = 55/108 (50%)
Frame = +1
Query: 327 SSASSSNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEASAAAATELVTVTT 386
S+A+++ A+PTA + A AA+T+ A++ SS + +A A+AAA + T T
Sbjct: 7 SAAATAPADAKPTATSSAVATTAAATSHAATTTSSAAAAAAASSA-ATAAATSSATTAAT 183
Query: 387 LDSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAAG 434
+AA AA +T TTTA TA SA AAT + A G
Sbjct: 184 APAAAASATPATAAAASTSTTPTTTA----TAAASAVAATAATAATDG 315
Score = 42.0 bits (97), Expect = 0.001
Identities = 33/90 (36%), Positives = 43/90 (47%)
Frame = +1
Query: 351 STAAIASSKSSTDGTSQLPTAEASAAAATELVTVTTLDSAAVGTATGAAAKFTTIGATTT 410
S AA A + + TS +A A+ AAAT TT +AA A+ AA T ATT
Sbjct: 7 SAAATAPADAKPTATS---SAVATTAAATSHAATTTSSAAAAAAASSAATAAATSSATTA 177
Query: 411 TADQPSTAGISAAAATTCSGAAAGDKERET 440
+TA +AA+AT + AAA T
Sbjct: 178 -----ATAPAAAASATPATAAAASTSTTPT 252
Score = 33.5 bits (75), Expect = 0.39
Identities = 31/107 (28%), Positives = 42/107 (38%), Gaps = 8/107 (7%)
Frame = -2
Query: 337 QPTAAAVAKGKKAASTAAIA--------SSKSSTDGTSQLPTAEASAAAATELVTVTTLD 388
QP+ AAVA A AA+A + ++ G ++ A A AA E V
Sbjct: 317 QPSVAAVAAVAATAEAAAVAVVVGVVEVEAAAAVAGVAEAAAAGAVAAVVAEEVAAAV-- 144
Query: 389 SAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAAGD 435
AA A AAA+ + A A +TA A + AA D
Sbjct: 143 -AAEEAAAAAAAEEVVVAACEVAAAVVATAEDVAVGFASAGAVAAAD 6
>TC213615 similar to UP|Q9SUL7 (Q9SUL7) SNF1 like protein kinase
(CBL-interacting protein kinase 4), partial (45%)
Length = 674
Score = 50.1 bits (118), Expect = 4e-06
Identities = 46/164 (28%), Positives = 68/164 (41%), Gaps = 2/164 (1%)
Frame = +3
Query: 340 AAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEASAAAATELVTVTTLDSAAVGTATGAA 399
A+ V AAST SSKS T P S +++T V ++ S+ AA
Sbjct: 228 ASCVRSTPCAASTTTPTSSKS----TRSSPPRPRSTSSSTSPVAASSSPSSPA-----AA 380
Query: 400 AKFTTIGATTTTADQPSTAGISAAAATTCSGAAAGDKERETEKENPKSPPRQVTPPSPPP 459
A + A T+ + P +A +A A+ T + + T P + R T SPP
Sbjct: 381 ASRSPSPAATSRSSSPLSASATAMASPTETSS------HRTSSSTPPATSRSPTSASPPS 542
Query: 460 TNDERSLSPPPRQEERPSP--GAATTSEAAQIEQAPGNRAGSSS 501
N ++S P RPSP ++ S + PG A SS+
Sbjct: 543 RNTSTTVSSTPPAARRPSPRQRSSAASATTAXKPTPGPAASSST 674
>TC222945 homologue to UP|Q8VAG3 (Q8VAG3) Wsv453 (WSSV513), partial (7%)
Length = 831
Score = 48.9 bits (115), Expect = 9e-06
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Frame = -1
Query: 620 KLMKEEADDLDASLQACKKEKDQVEKDLAAKGKAL-AAKELEFETLGAELELAKKALAEQ 678
K +EE + L+ K + +E L AK K + AAK +E A + L K AE
Sbjct: 831 KAAQEEMIEAQEELEQAKAQSSTLESSLLAKHKEIEAAKVVEMLARDAIITLEKSKSAEG 652
Query: 679 KKKSAESLALVKADLE--------AMRATSEEIKKVNEAHGATLVTKDAEITSLLARIKE 730
K +S ++V LE A +A + ++ A+ + +++E+ SL ++KE
Sbjct: 651 NKNDKDSSSMVTLTLEEYHELSRRAYKAEEQANMRIEAANSQIQIARESELRSL-EKLKE 475
Query: 731 LEGELSVEKAKATEARE 747
L ELSV + + A E
Sbjct: 474 LNEELSVRRESLSIATE 424
>TC228914 similar to UP|DAH1_MOUSE (Q9QYB2) Dachshund homolog 1 (Dach1),
partial (3%)
Length = 784
Score = 48.1 bits (113), Expect = 2e-05
Identities = 51/194 (26%), Positives = 82/194 (41%), Gaps = 26/194 (13%)
Frame = +3
Query: 325 KGSSASSSNPGAQPTAAAVAKGKKAASTAAIA------SSKSSTDGTSQLPTAEASAAAA 378
+ SS SS P T + A G S+ + + S SS TS PT+ +S AA
Sbjct: 144 RSSSPPSSPPSPSTTPTSSAPGNAPHSSPSASKRRPTPSGPSSAASTSPKPTSTSSRAAP 323
Query: 379 TELVTVTTLDSAAVGTATGAAAKF-----TTIGATTTTADQPSTAGISA--AAATTC--- 428
++ + T SA++GT+ + A ++TT+A P+ A +A A+ATT
Sbjct: 324 SK--SPFTWPSASLGTSMSSPASPPPPAPNASTSSTTSAASPALASSAANTASATTAPSL 497
Query: 429 ----------SGAAAGDKERETEKENPKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSP 478
+ + T +P + P++ SP P++ S S PP +E P
Sbjct: 498 PSIPSRTTPTTARSTPSSSNPTSSTSPTATPKRTRVSSPTPSSSSTSRSSPPSPKE---P 668
Query: 479 GAATTSEAAQIEQA 492
A T + E+A
Sbjct: 669 TATVTVSHTRGEEA 710
Score = 31.2 bits (69), Expect = 1.9
Identities = 21/77 (27%), Positives = 29/77 (37%)
Frame = +3
Query: 438 RETEKENPKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAATTSEAAQIEQAPGNRA 497
R T P + PR +PPS PP+ S P SP A S+ P + A
Sbjct: 108 RTTTSTLPPASPRSSSPPSSPPSPSTTPTSSAPGNAPHSSPSA---SKRRPTPSGPSSAA 278
Query: 498 GSSSHFNMLPNAIEPSE 514
+S + PS+
Sbjct: 279 STSPKPTSTSSRAAPSK 329
>TC216484 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan
protein 1 precursor, partial (58%)
Length = 1213
Score = 47.8 bits (112), Expect = 2e-05
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 2/148 (1%)
Frame = +1
Query: 356 ASSKSSTDGTSQLPTAEASAAAATELVTVTTLDSAAVGTAT--GAAAKFTTIGATTTTAD 413
+SS S T+ +++++ ++ T + S TA +A TT T +
Sbjct: 85 SSSPPSPTRTTSPASSQSTPSSPPSTTTSPSPTSPPKSTAKPPSPSAPSTTPPCRTFSRS 264
Query: 414 QPSTAGISAAAATTCSGAAAGDKERETEKENPKSPPRQVTPPSPPPTNDERSLSPPPRQE 473
P + ++ +T S + + P SPP+ PP+PPP S SP E
Sbjct: 265 TPPSTPSRTSSPSTSSSTTSAPRSSTRSPTAPPSPPQCTKPPAPPPDPPASSTSPTSTAE 444
Query: 474 ERPSPGAATTSEAAQIEQAPGNRAGSSS 501
+ SP TT+ + Q P ++ ++S
Sbjct: 445 KSHSPPKTTTAHSPQRSSNP*KKSLTTS 528
>TC228611 weakly similar to GB|CAA72487.1|1890317|ATP26A peroxidase ATP26a
{Arabidopsis thaliana;} , partial (49%)
Length = 731
Score = 47.0 bits (110), Expect = 3e-05
Identities = 48/201 (23%), Positives = 78/201 (37%), Gaps = 3/201 (1%)
Frame = +3
Query: 321 RRLVKGSSASSSNPG-AQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEASAAAAT 379
R LV+ S+ S P A + A ++AS++ ASS ++ S P + +AT
Sbjct: 108 RTLVRSSARS*GTPSQASRSPAPPPPPPRSASSSTTASSPTAVTPPSSSPPRPSPGPSAT 287
Query: 380 ELVTVTTLDSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAAGDKERE 439
+T S A + + +A + T + P+ + A ++ CS A +
Sbjct: 288 P---TSTSPSPATPSTSSSAPRPPLSSPAPTPSPAPTFSPPPPATSSPCSAAPSSPSSSA 458
Query: 440 TEKENPKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAATTSE--AAQIEQAPGNRA 497
P SPP P SPPP P + SP AA+ S+ + + P +
Sbjct: 459 AATAEPPSPP-PYPPTSPPP-------PCPSLKSPNSSPNAASPSKNSSPSVGPTPSDSL 614
Query: 498 GSSSHFNMLPNAIEPSEFLLT 518
+ S P + P L T
Sbjct: 615 TAPSSSRTSPTTLPPPTTLAT 677
>TC206176 weakly similar to UP|Q8LPA7 (Q8LPA7) Cold shock protein-1, partial
(77%)
Length = 883
Score = 45.8 bits (107), Expect = 8e-05
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Frame = -3
Query: 351 STAAIASSKSSTDGTSQLPTAEASAAAATELVTVTTLDSAAVGTATGAAAKFTTIGATT- 409
STA ASS ++ T+ +P A A++ +AT + + + A ++FTT+ A+T
Sbjct: 605 STAVAASSAAAAASTTNVPPATAASISATTTTSSVPVPTTASTAIPSQMSRFTTVVASTA 426
Query: 410 TTADQPSTAGISAAAATTCSGAAAGDKERETEKENPKSPPRQVTPPS 456
+TA +T ++ ATT + A A T +P +T S
Sbjct: 425 STASSTTTVTTASTVATTTTVATASTVATSTTSSSPAIASATITASS 285
Score = 39.3 bits (90), Expect(2) = 0.001
Identities = 35/102 (34%), Positives = 49/102 (47%), Gaps = 7/102 (6%)
Frame = -3
Query: 339 TAAAVAKGKKAASTA----AIASSKSSTDGTSQLPT-AEASAAAATELVTVTTLDSAAVG 393
TA A + AAST A A+S S+T TS +P AS A +++ TT+ ++
Sbjct: 602 TAVAASSAAAAASTTNVPPATAASISATTTTSSVPVPTTASTAIPSQMSRFTTVVASTAS 423
Query: 394 TATGAAAKFT--TIGATTTTADQPSTAGISAAAATTCSGAAA 433
TA+ T T+ TTT A TA A + T+ S A A
Sbjct: 422 TASSTTTVTTASTVATTTTVA----TASTVATSTTSSSPAIA 309
Score = 31.6 bits (70), Expect = 1.5
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Frame = -3
Query: 318 PKRRRLVKGSSASSSNPGAQPTAAAVAKGKK-------AASTAAIASSKSSTDGTSQLPT 370
P + ++ +SS P PT A+ A + ASTA+ ASS ++ S + T
Sbjct: 548 PATAASISATTTTSSVP--VPTTASTAIPSQMSRFTTVVASTASTASSTTTVTTASTVAT 375
Query: 371 AEASAAAATELVTVTTLDSAAVGTATGAAA 400
A A+T + T TT S A+ +AT A+
Sbjct: 374 TTTVATAST-VATSTTSSSPAIASATITAS 288
Score = 31.2 bits (69), Expect = 1.9
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -1
Query: 445 PKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAATTSEAAQIEQAP 493
P PP + PP PPP LSPPP P A ++ Q+ QAP
Sbjct: 547 PPPPPPYLPPPPPPP-----YLSPPP----PPLQSLARCPDSPQL*QAP 428
Score = 21.9 bits (45), Expect(2) = 0.001
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 445 PKSPPRQVTPPSPP 458
P PP + PPSPP
Sbjct: 331 PPRPPP*LRPPSPP 290
>TC227575 UP|PHYB_SOYBN (P42499) Phytochrome B, complete
Length = 4095
Score = 45.1 bits (105), Expect = 1e-04
Identities = 47/189 (24%), Positives = 82/189 (42%), Gaps = 14/189 (7%)
Frame = +2
Query: 327 SSASSSNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEASAA--AATELVTV 384
++ ++S P A+P+ + G +S SS +S G S P AS + + +
Sbjct: 89 TTTTTSTP*ARPSRSTRRTGSTPSS-----SSPASPGGPSTTPNQSASHRNPSPSSR*RL 253
Query: 385 TTLDSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAAGDKERETEKEN 444
T S+A +++ +A + + PS + ++ TCS R T +
Sbjct: 254 TLSKSSAAASSSPSAP*-------SPSTSPPSASSVTPTTPATCSALLRSPSLRSTTRTT 412
Query: 445 P-----KSPP-RQVTPPSPP----PTNDERSLSPPPRQEERPSPGA--ATTSEAAQIEQA 492
P +SP R T +PP P ++ SL+P P +RPSP A A+ + + +
Sbjct: 413 PPSLSARSPSLRSTTRTTPPSLSAPMSEPSSLTPAPYSSKRPSPHAKLAS*TLSGSTPEP 592
Query: 493 PGNRAGSSS 501
PG+ + SS
Sbjct: 593 PGSLSMESS 619
>TC228913 weakly similar to UP|Q8IP68 (Q8IP68) CG31813-PA, partial (19%)
Length = 692
Score = 43.9 bits (102), Expect = 3e-04
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 9/175 (5%)
Frame = +2
Query: 327 SSASSSNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEASAAAATELVTVTT 386
++A S+P A + AST+ +S SS S+ P+ SA+ AT + + +
Sbjct: 146 ANAPPSSPSASTRLQTPSGPSSDASTSPKPTSTSSRAAPSKSPSTWPSASLATSMSSPAS 325
Query: 387 ----LDSAAVGTATGAAA-----KFTTIGATTTTADQPSTAGISAAAATTCSGAAAGDKE 437
+ SA+ + T AA+ + TT PST + T +
Sbjct: 326 PQPRVPSASTSSTTSAASPASASSVANTASVTTAPSPPSTPSTTTTPPPTARSTPS--SS 499
Query: 438 RETEKENPKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAATTSEAAQIEQA 492
T +P + P++ SP P++ S S P +E P A T + E+A
Sbjct: 500 NPTLSTSPTATPKRTRVSSPTPSSSSTSRSSRPSPKE---PTATVTVSHTRGEEA 655
Score = 33.1 bits (74), Expect = 0.51
Identities = 22/77 (28%), Positives = 30/77 (38%)
Frame = +2
Query: 438 RETEKENPKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAATTSEAAQIEQAPGNRA 497
R T P + PR +PPS PP+ S P SP A+T Q P + A
Sbjct: 47 RTTTSTLPPASPRSSSPPSSPPSPSTTPTSSAPANAPPSSPSAST---RLQTPSGPSSDA 217
Query: 498 GSSSHFNMLPNAIEPSE 514
+S + PS+
Sbjct: 218 STSPKPTSTSSRAAPSK 268
>TC219334 weakly similar to UP|Q9FUZ9 (Q9FUZ9) SKP1 interacting partner 6
(Fragment), partial (29%)
Length = 1451
Score = 43.1 bits (100), Expect = 5e-04
Identities = 48/180 (26%), Positives = 73/180 (39%), Gaps = 10/180 (5%)
Frame = +1
Query: 331 SSNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEASAAAATELVTVTTLD-- 388
S NP + + + +S A SS S + T+ L ++ +S + L+T ++L
Sbjct: 142 SPNPSTPSSLPQSSSPHEPSSNAPNPSSTSLSTHTTPL-SSNSSRSTTQTLITPSSLPFP 318
Query: 389 ---SAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSG-----AAAGDKERET 440
T ++A +T A +T P T+G S AA+T S +AA RE+
Sbjct: 319 RSPPPPSAPPTPSSAPPSTSSAAPSTTSPPPTSGSSTAASTAGSAVPPCASAANSPPRES 498
Query: 441 EKENPKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAATTSEAAQIEQAPGNRAGSS 500
S P P P RS S PP R SP S + AP + +GS+
Sbjct: 499 STARSTSSAAASLTPGPAPPIGRRS-STPPLANGRGSP-VRRRSVRSGCTPAPSSGSGST 672
Score = 29.6 bits (65), Expect = 5.6
Identities = 26/106 (24%), Positives = 44/106 (40%)
Frame = +1
Query: 407 ATTTTADQPSTAGISAAAATTCSGAAAGDKERETEKENPKSPPRQVTPPSPPPTNDERSL 466
+T ++ Q S+ ++ A S + + +S + + PS P RS
Sbjct: 154 STPSSLPQSSSPHEPSSNAPNPSSTSLSTHTTPLSSNSSRSTTQTLITPSSLPF--PRS- 324
Query: 467 SPPPRQEERPSPGAATTSEAAQIEQAPGNRAGSSSHFNMLPNAIEP 512
PPP PS +TS AA +P +GSS+ + +A+ P
Sbjct: 325 PPPPSAPPTPSSAPPSTSSAAPSTTSPPPTSGSSTAASTAGSAVPP 462
>TC225559 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expressed in
cucumber hypocotyls, complete cds (Arabinogalactan
protein), partial (47%)
Length = 870
Score = 43.1 bits (100), Expect = 5e-04
Identities = 48/168 (28%), Positives = 66/168 (38%), Gaps = 12/168 (7%)
Frame = +3
Query: 328 SASSSNPGAQPTAAAVAKGKKAA--STAAIASSKSSTDGTSQLPTAEASAA---AATELV 382
+A+ SN A P AA A+ S A +AS KSS + T AS AA V
Sbjct: 144 AAAPSNTPATPAAATPAQAPSTVPKSPAPVASPKSSPPAATPASTPAASPTTTPAAPAPV 323
Query: 383 TVTTLDSAAVGTATGAAAKFTTIGATTTTADQPST---AGISAAAATTCSGAAAGDKERE 439
T S T A + ++ A P + A + AA TT + K ++
Sbjct: 324 TKPPAASPPPATPPPATPPPAPVPVSSPPAPVPVSSPPAPVPVAAPTTPVAPSPAPKHKK 503
Query: 440 T-EKENPKSPPRQVTPPSPP---PTNDERSLSPPPRQEERPSPGAATT 483
+K +P + PP+PP P E + SP P GA TT
Sbjct: 504 KGKKHGAPAPSPLLGPPAPPTGAPGPSEDASSPGPGTAANDESGAETT 647
Score = 34.3 bits (77), Expect = 0.23
Identities = 40/146 (27%), Positives = 53/146 (35%), Gaps = 25/146 (17%)
Frame = +3
Query: 390 AAVGTATGAAAKFTTIG--ATTTTADQPST--------------------AGISAAAATT 427
A VG + AAA T A T A PST A AA+ TT
Sbjct: 120 AGVGGQSPAAAPSNTPATPAAATPAQAPSTVPKSPAPVASPKSSPPAATPASTPAASPTT 299
Query: 428 CSGAAAGDKERETEKENPKSPPRQVTPPSPPPTNDERS---LSPPPRQEERPSPGAATTS 484
A A + P +PP PP+P P + + +S PP P P AA T+
Sbjct: 300 TPAAPAPVTKPPAASPPPATPPPATPPPAPVPVSSPPAPVPVSSPP----APVPVAAPTT 467
Query: 485 EAAQIEQAPGNRAGSSSHFNMLPNAI 510
A AP ++ H P+ +
Sbjct: 468 PVAP-SPAPKHKKKGKKHGAPAPSPL 542
>TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like
arabinogalactan-protein 2, partial (57%)
Length = 1652
Score = 42.7 bits (99), Expect = 6e-04
Identities = 25/93 (26%), Positives = 41/93 (43%)
Frame = +2
Query: 409 TTTADQPSTAGISAAAATTCSGAAAGDKERETEKENPKSPPRQVTPPSPPPTNDERSLSP 468
++T+ PS +++ +T+ S +A + P SPP PP+PPP S SP
Sbjct: 221 SSTSTSPSPPSKTSSPSTSSSTTSAPKSSTRSTTAPPSSPPCS-RPPAPPPAPPATSTSP 397
Query: 469 PPRQEERPSPGAATTSEAAQIEQAPGNRAGSSS 501
R SP TT+ + P + ++S
Sbjct: 398 TSRPARSASPPKTTTAPSTPSTSNPSRKCPTTS 496
Score = 41.2 bits (95), Expect = 0.002
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 3/163 (1%)
Frame = +2
Query: 318 PKRRRLVKGS-SASSSNPGAQPTAAAVAKG--KKAASTAAIASSKSSTDGTSQLPTAEAS 374
PKR + S S S+ P P++ + + K +S + +S+ S+ +++ TA S
Sbjct: 155 PKRSTAARPSPSWPSTMPPCPPSSTSTSPSPPSKTSSPSTSSSTTSAPKSSTRSTTAPPS 334
Query: 375 AAAATELVTVTTLDSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAAG 434
+ + A + T A+ + TTT PST+ S TT + +
Sbjct: 335 SPPCSRPPAPPPAPPATSTSPTSRPARSASPPKTTTAPSTPSTSNPSRKCPTTSPSSKSA 514
Query: 435 DKERETEKENPKSPPRQVTPPSPPPTNDERSLSPPPRQEERPS 477
P +PP PP PPP + L P + RPS
Sbjct: 515 P---------PLAPPTPRHPPPPPPPST*SPLC--PNKAARPS 610
>TC216231 similar to UP|Q41188 (Q41188) Glycine-rich protein 2 (GRP2)
(AT4g38680/F20M13_240), partial (42%)
Length = 891
Score = 42.4 bits (98), Expect = 8e-04
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Frame = -2
Query: 311 QAEGAQAPKRRRLVKGSSASSSNPGAQPTAAAVAKGKKAASTAAIASSKSST-----DGT 365
+ + +A R + +S + PG P V A T A+ S+ + T
Sbjct: 434 EPQNTKARPHPRTIVSTSTGRAVPGKMPGLPTVVAASAATPTTAVPSTATPTLAAVPSYV 255
Query: 366 SQLPT--AEASAAAATELVTVTT------LDSAAVGTATGAAAKFTTIGATTTTADQPST 417
+ L T A SAAAAT +T + + SAA +T +AA TTI ++ T S+
Sbjct: 254 TSLATLIASPSAAAATSTITTASAIATSPIASAASSISTSSAASATTIATSSATXTIASS 75
Query: 418 AGISAAA 424
SA A
Sbjct: 74 XXSSATA 54
>TC215140 similar to GB|AAL32703.1|17065098|AY062625 nucleotide sugar
epimerase-like protein {Arabidopsis thaliana;} , partial
(91%)
Length = 1885
Score = 42.4 bits (98), Expect = 8e-04
Identities = 50/193 (25%), Positives = 78/193 (39%), Gaps = 37/193 (19%)
Frame = +1
Query: 332 SNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEASAA-AATELVTVTTLD-- 388
S PG +A AS ++ + +S+ T+ LP+ A+ A + + T TT+
Sbjct: 298 SPPGRSRSATPPPLAAPTASPSSSPAPLASSAATAPLPSKNAATAFSGSTTSTATTIPP* 477
Query: 389 SAAVGTATGAAAKFTTIGATTTT------------ADQPSTAGISAAAATTCSGA----- 431
+A V +G +F++ T TT + ST+ + A+AT C
Sbjct: 478 NAPVRQCSGNT-RFSSWKVTLTTPPCLRSSSTLSPSPTSSTSPLRLASATPCRTPNPTSP 654
Query: 432 ----AAGDKERETEKENPKSP-------------PRQVTPPSPPPTNDERSLSPPPRQEE 474
A+ R P P P+ ++P S PTN S +PPPR+
Sbjct: 655 PTLLASSTSSRLPNPPIPNPP*SGLHPAPSTASTPKTLSPSSTAPTNPPAS-TPPPRKPA 831
Query: 475 RPSPGAATTSEAA 487
R SP TTS A+
Sbjct: 832 RRSPTPTTTSTAS 870
Score = 33.1 bits (74), Expect = 0.51
Identities = 25/101 (24%), Positives = 41/101 (39%), Gaps = 10/101 (9%)
Frame = +1
Query: 403 TTIGATTTTADQPSTAGISAAAATTC-SGAAAGDKERETEKENPKSPPRQVT-------- 453
TT + +TA ST ++++ S +++ T +P++ P T
Sbjct: 103 TTATSGDSTAPNSSTPPPNSSSVPLS*SHSSSSSSSPSTTLPSPQTSPPTATSTPTPTSS 282
Query: 454 -PPSPPPTNDERSLSPPPRQEERPSPGAATTSEAAQIEQAP 493
PP P P RS +PPP SP ++ A+ AP
Sbjct: 283 PPPPPSPPGRSRSATPPPLAAPTASPSSSPAPLASSAATAP 405
Score = 30.0 bits (66), Expect = 4.3
Identities = 44/192 (22%), Positives = 70/192 (35%), Gaps = 27/192 (14%)
Frame = +1
Query: 323 LVKGSSASSSNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEA-------SA 375
L +++ SS+P P A++ A + AA A S S+T + +P A +
Sbjct: 337 LAAPTASPSSSPA--PLASSAATAPLPSKNAATAFSGSTTSTATTIPP*NAPVRQCSGNT 510
Query: 376 AAATELVTVTT-----LDSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTC-- 428
++ VT+TT S + T + + AT P++ A++T+
Sbjct: 511 RFSSWKVTLTTPPCLRSSSTLSPSPTSSTSPLRLASATPCRTPNPTSPPTLLASSTSSRL 690
Query: 429 ----------SGAAAGDKERETEKENPKSPPRQVTPP-SPPPTND--ERSLSPPPRQEER 475
SG T K S PP S PP RS +P
Sbjct: 691 PNPPIPNPP*SGLHPAPSTASTPKTLSPSSTAPTNPPASTPPPRKPARRSPTPTTTSTAS 870
Query: 476 PSPGAATTSEAA 487
PSP +A++ A
Sbjct: 871 PSPDSASSPSTA 906
>CO981213
Length = 710
Score = 42.0 bits (97), Expect = 0.001
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 6/136 (4%)
Frame = +1
Query: 328 SASSSNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEASAAAATELVTVTTL 387
S S+S + A + S+ ++ S +S+ + PTA +S + T L TTL
Sbjct: 154 STSASGACSPREQNAWLSSSRRVSSCTLSHSPTSSPPSPASPTASSSPTSPTALAASTTL 333
Query: 388 ------DSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAAGDKERETE 441
+++ TAT A++ T + +T+ ST+ ++ ++T S + K + +
Sbjct: 334 LPPPSAPTSSSTTATAASSPSTPPQSPASTSS--STSKSTSLTSSTPSA*TSSPKPKPSS 507
Query: 442 KENPKSPPRQVTPPSP 457
P + P Q PPSP
Sbjct: 508 SLEPFNSPPQFAPPSP 555
Score = 31.6 bits (70), Expect = 1.5
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +1
Query: 444 NPKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAATTSEAAQIEQAPGNRAGSSSHF 503
+P SP +P SP +L PPP S A S + Q+P + + S+S
Sbjct: 265 SPASPTASSSPTSPTALAASTTLLPPPSAPTSSSTTATAASSPSTPPQSPASTSSSTSKS 444
Query: 504 NMLPNA 509
L ++
Sbjct: 445 TSLTSS 462
>TC228567
Length = 1531
Score = 41.6 bits (96), Expect = 0.001
Identities = 53/222 (23%), Positives = 94/222 (41%), Gaps = 8/222 (3%)
Frame = +2
Query: 526 EKEVLSRGINETKEETLACLLRAGCIFAHAFDKFNSAVTEAERLKAESAQHQEAATAWEK 585
EK VL+ + +++E+ A ++ +K SA+ + + E+ +E T K
Sbjct: 473 EKSVLA-SLKQSEEKASAAVVNLQA----ELEKSRSAIAFIQMKENEA---REMMTELPK 628
Query: 586 RFDKLVAQAGKDKVHADKLIGAAGNRIGELEDHLKLMKEEADDLDASLQACKKEKDQVEK 645
+ K A ++ A L AA + E ++ ++ K ++ L++SL A +KE
Sbjct: 629 KLQK----ASQEADEAKSLAQAAQAELIEAQEEVEQAKAKSSTLESSLLAAQKE------ 778
Query: 646 DLAAKGKALAAKELEFETLGAELELAKKALAEQKKKSAESLALVKADLEAMRATSEEIKK 705
AAK E A L K A+ K +S ++V LE S K
Sbjct: 779 -------IEAAKVAEMLARDAITALEKSESAKGNKNDKDSSSMVTLTLEEYHELSRRAYK 937
Query: 706 VNEAHGATL--------VTKDAEITSLLARIKELEGELSVEK 739
E A + + +++E+ S L +++EL ELSV +
Sbjct: 938 AEEQANARIEAATSQIQIARESELRS-LEKLEELNEELSVRR 1060
>AI959820 similar to GP|14335118|gb| At1g30200/F12P21_1 {Arabidopsis
thaliana}, partial (19%)
Length = 342
Score = 41.6 bits (96), Expect = 0.001
Identities = 25/101 (24%), Positives = 43/101 (41%), Gaps = 2/101 (1%)
Frame = +2
Query: 389 SAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCSGAAAGDKERETEKE--NPK 446
+A+ A+ +++ + ++ +TA P+T + T A +G + E NP
Sbjct: 29 AASSRAASTPSSRRSKTSSSASTASSPTTTPLPPPPPPTSPAAPSGTSSASSSAES*NPS 208
Query: 447 SPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAATTSEAA 487
P + P+ PP R L PPP PS T + A+
Sbjct: 209 KPSVSSSAPNAPPPPPSRPLPPPPPPPPSPSEPTTTPTPAS 331
Score = 35.0 bits (79), Expect = 0.13
Identities = 33/131 (25%), Positives = 54/131 (41%)
Frame = +2
Query: 353 AAIASSKSSTDGTSQLPTAEASAAAATELVTVTTLDSAAVGTATGAAAKFTTIGATTTTA 412
AA ASS++++ +S+ +SA+ A+ T T L T+ AA T+ +++ +
Sbjct: 23 AAAASSRAASTPSSRRSKTSSSASTASS-PTTTPLPPPPPPTSP-AAPSGTSSASSSAES 196
Query: 413 DQPSTAGISAAAATTCSGAAAGDKERETEKENPKSPPRQVTPPSPPPTNDERSLSPPPRQ 472
PS +S++A P PP + PP PPP P
Sbjct: 197 *NPSKPSVSSSAPNA-----------------PPPPPSRPLPPPPPPP------PSPSEP 307
Query: 473 EERPSPGAATT 483
P+P + TT
Sbjct: 308 TTTPTPASPTT 340
>TC215011 UP|Q9MAX8 (Q9MAX8) Epsilon1-COP, complete
Length = 1290
Score = 41.2 bits (95), Expect = 0.002
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Frame = +2
Query: 386 TLDSAAVGTATGAAAKFTTIGATTTTADQ--PSTAGISAAAATTCSGAAAGDKERETEKE 443
T S + T+T A K + AT T+ + PS+A S+ AAT+ S +++ R T
Sbjct: 83 TTSSTSATTSTSALTKPPSTAATLPTSPKKIPSSATPSSTAATSPSASSSSSSPRSTT-- 256
Query: 444 NPKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSPGAATTSEAAQIEQAP--GNRAGSSS 501
+ P P+N S+SP P PS + + S +E P G+ SSS
Sbjct: 257 --------MLPHHSKPSNSSPSISPLPTPRIPPSRVSRSGSPIPLLETTPR*GSSPVSSS 412
Query: 502 HFNML-------PNAIEP 512
M+ P +EP
Sbjct: 413 STRMISMKPSNTPTPVEP 466
>TC214476 weakly similar to UP|Q8L685 (Q8L685) Pherophorin-dz1 protein
precursor, partial (14%)
Length = 642
Score = 41.2 bits (95), Expect = 0.002
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Frame = +2
Query: 330 SSSNPGAQPTAAAVAKGKKAASTAAIASSKSSTDGTSQLPTAEASAAAATELVTVT-TLD 388
S+S+ T A + ST A + S T TS A+ + +T L T T T
Sbjct: 299 SNSSSFIATTTVASTSTSASTSTTTTARTSSFTTTTSTTTVTSAT*STSTTLATSTSTSS 478
Query: 389 SAAVGTATGAAAKFTTIGATTTTADQPS-----TAGISAAAATTCSGAA 432
S A T T + T+ AT+T++ PS T S++ ATT SGAA
Sbjct: 479 SLATTTFTPSCTSTTSSLATSTSSTTPSSLASTTTITSSSFATTTSGAA 625
Score = 32.3 bits (72), Expect(2) = 0.057
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +2
Query: 370 TAEASAAAATELVTVTTLDSAAVGTATGAAAKFTTIGATTTTADQPSTAGISAAAATTCS 429
T+ +S+ AT V T+ ++ T T + FTT +TTT + + A +T+ S
Sbjct: 296 TSNSSSFIATTTVASTSTSASTSTTTTARTSSFTTTTSTTTVTSAT*STSTTLATSTSTS 475
Query: 430 GAAA 433
+ A
Sbjct: 476 SSLA 487
Score = 22.7 bits (47), Expect(2) = 0.057
Identities = 13/34 (38%), Positives = 14/34 (40%)
Frame = +3
Query: 445 PKSPPRQVTPPSPPPTNDERSLSPPPRQEERPSP 478
P PP PP PP +L PPP P P
Sbjct: 495 PSPPP--ALPPLPP*LPPPPALPPPPWLPPPP*P 590
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.312 0.128 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,395,303
Number of Sequences: 63676
Number of extensions: 572769
Number of successful extensions: 12686
Number of sequences better than 10.0: 753
Number of HSP's better than 10.0 without gapping: 6585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10235
length of query: 821
length of database: 12,639,632
effective HSP length: 105
effective length of query: 716
effective length of database: 5,953,652
effective search space: 4262814832
effective search space used: 4262814832
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Lotus: description of TM0039.1