BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0037a.7
(1027 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC215803 homologue to UP|Q6YBV2 (Q6YBV2) Cellulose synthase, par... 934 0.0
TC215151 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase cata... 822 0.0
TC216172 homologue to UP|Q6J8X2 (Q6J8X2) Cellulose synthase, par... 612 e-175
TC217784 similar to UP|P93155 (P93155) Cellulose synthase , part... 561 e-160
TC215149 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase cata... 547 e-156
TC230955 homologue to UP|Q6XP46 (Q6XP46) Cellulose synthase, par... 389 e-108
TC211132 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase cata... 342 5e-94
TC230957 homologue to UP|Q6J8W8 (Q6J8W8) Cellulose synthase, par... 329 3e-90
TC215804 homologue to UP|Q6YBV2 (Q6YBV2) Cellulose synthase, par... 312 4e-85
TC230969 homologue to UP|Q8GUZ9 (Q8GUZ9) Cellulose synthase-like... 310 2e-84
TC206323 similar to UP|Q6J8X1 (Q6J8X1) Cellulose synthase, parti... 291 1e-78
AW186367 similar to GP|23534479|g cellulose synthase {Populus tr... 283 2e-76
TC231157 similar to GB|CAC82909.1|25136916|ATH297948 cellulose s... 269 5e-72
CA800297 similar to GP|4886756|gb cellulose synthase catalytic s... 263 2e-70
TC216171 homologue to UP|Q6J8X2 (Q6J8X2) Cellulose synthase, par... 256 5e-68
TC219881 homologue to UP|Q9SWW6 (Q9SWW6) Cellulose synthase cata... 254 1e-67
AI960925 homologue to GP|23534479|g cellulose synthase {Populus ... 253 4e-67
BU081134 homologue to GP|4886756|gb cellulose synthase catalytic... 252 7e-67
AW279531 homologue to PIR|T10800|T10 cellulose synthase (EC 2.4.... 251 1e-66
TC220504 similar to UP|Q8GUZ9 (Q8GUZ9) Cellulose synthase-like p... 250 2e-66
>TC215803 homologue to UP|Q6YBV2 (Q6YBV2) Cellulose synthase, partial (57%)
Length = 2145
Score = 934 bits (2414), Expect = 0.0
Identities = 449/620 (72%), Positives = 508/620 (81%), Gaps = 22/620 (3%)
Frame = +3
Query: 430 RINALVAKAQKVPPEGWIMQDGTPWPGNNTKDHPGMIQVFLGNSGGVDTEGNQLPRLVYV 489
RINALVAKAQK+P EGW MQDGT WPGNN +DHPGMI VFLG+SGG+DT+GN+LPRLVYV
Sbjct: 3 RINALVAKAQKMPEEGWTMQDGTAWPGNNPRDHPGMIHVFLGHSGGLDTDGNELPRLVYV 182
Query: 490 SREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQT 549
SREKRPGFQHHKKAGAMNAL+RVSAVLTN ++LN+DCDHY NNSKA++EAMCF+MDP
Sbjct: 183 SREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPVI 362
Query: 550 GKKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGY 609
GKK CYVQFPQRFDGID HDRYANRN VFFDINMKG DG+QGPVYVGTGC F RQALYGY
Sbjct: 363 GKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGQDGVQGPVYVGTGCCFNRQALYGY 542
Query: 610 NP--PKGPKRPKMVSCDCCPCFGSRKKLKHA------KSDVNGEAAS------------- 648
+P + P ++ C+GSRKK K K G S
Sbjct: 543 DPVLTEEDLEPNII---VKSCWGSRKKGKGGNKKYSDKKKAMGRTESTVPIFNMEDIEEG 713
Query: 649 LKGMDDDKEVLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAGMLKEAIHVISCGYE 708
++G DD++ +LMSQ + EK+FGQS +F+ +T ME+GG+PPS++PA +LKEAIHVISCGYE
Sbjct: 714 VEGYDDERTLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYE 893
Query: 709 DKTEWGLEVGWIYGSITEDILTGFKMHCRGWRSIYCMPRRAAFKGTAPINLSDRLNQVLR 768
DKTEWG E+GWIYGS+TEDILTGFKMH RGW SIYCMP R AFKG+APINLSDRLNQVLR
Sbjct: 894 DKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLR 1073
Query: 769 WALGSIEIFFSHHCPLWYGYKEKKLKWLERFAYANTTIYPFTSIPLVAYCVLPAVCLLTD 828
WALGSIEIF S HCPLWYGY KLK L R AY NT +YPFTSIPL+AYC LPA CLLT+
Sbjct: 1074 WALGSIEIFLSRHCPLWYGY-NGKLKPLMRLAYINTIVYPFTSIPLIAYCTLPAFCLLTN 1250
Query: 829 KFIMPPISTFAGLYFIALFSSIIATGVIELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVI 888
KFI+P IS FA ++FI LF SI T ++EL+WSGVSIE+WWRNEQFWVIGG SAHLFAV
Sbjct: 1251 KFIIPEISNFASMWFILLFVSIFTTSILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVF 1430
Query: 889 QGLLKVLAGIDTNFTVTSKATD-DEDFGELYAIKWTTLLIPPTTILIINIVGVVAGVSDA 947
QGLLKVLAGIDTNFTVTSKA+D D DF ELY KWT+LLIPPTT+LI+N+VG+VAGVS A
Sbjct: 1431 QGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSYA 1610
Query: 948 INNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVR 1007
IN+GYQSWGPLFGKLFF+ WVI HLYPFLKGL+GRQNRTPTIV++WSVLLASIFSLLWVR
Sbjct: 1611 INSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVR 1790
Query: 1008 IDPFVLKTKGPDTKLCGINC 1027
IDPF + CGINC
Sbjct: 1791 IDPFTSDSNKLTNGQCGINC 1850
>TC215151 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase catalytic subunit,
partial (50%)
Length = 2007
Score = 822 bits (2124), Expect = 0.0
Identities = 393/536 (73%), Positives = 442/536 (82%), Gaps = 22/536 (4%)
Frame = +2
Query: 514 AVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDTHDRYAN 573
AVLTN PF+LNLDCDHYINNSKA+REAMCF+MDP GK VCYVQFPQRFDGID +DRYAN
Sbjct: 2 AVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRNDRYAN 181
Query: 574 RNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCPCFGSRK 633
RNTVFFDIN++GLDGIQGPVYVGTGCVF R ALYGY PP PK K C G+RK
Sbjct: 182 RNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPKHKKPGFLSSL-CGGNRK 358
Query: 634 KLKHAKSDVNGEAASLK---------------------GMDDDKEVLMSQMNFEKKFGQS 672
K + + + S K G DD+K +LMSQM+ EK+FGQS
Sbjct: 359 KRSKSSKKGSDKKKSSKNVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQS 538
Query: 673 SIFVTSTLMEEGGVPPSSSPAGMLKEAIHVISCGYEDKTEWGLEVGWIYGSITEDILTGF 732
++FV STLME GGVP S++P +LKEAIHVISCGYEDK+EWG E+GWIYGS+TEDILTGF
Sbjct: 539 AVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKSEWGSEIGWIYGSVTEDILTGF 718
Query: 733 KMHCRGWRSIYCMPRRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPLWYGYKEKK 792
KMH RGWRSIYCMP+ AFKG+APINLSDRLNQVLRWALGS+EI FS HCP+WYGY +
Sbjct: 719 KMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGY-SGR 895
Query: 793 LKWLERFAYANTTIYPFTSIPLVAYCVLPAVCLLTDKFIMPPISTFAGLYFIALFSSIIA 852
LKWLERFAY NTTIYP TSIPL+ YC LPAVCLLT+KFI+P IS A ++FI+LF SI A
Sbjct: 896 LKWLERFAYVNTTIYPVTSIPLLMYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFA 1075
Query: 853 TGVIELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATD-D 911
TG++E++WSGV I+EWWRNEQFWVIGGVSAHLFAV QGLLKVLAGIDTNFTVTSKA+D D
Sbjct: 1076 TGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 1255
Query: 912 EDFGELYAIKWTTLLIPPTTILIINIVGVVAGVSDAINNGYQSWGPLFGKLFFSFWVIVH 971
DF ELY KWTTLLIPPTT+LIIN+VGVVAG+S AIN+GYQSWGPLFGKLFF+FWVI+H
Sbjct: 1256 GDFAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIH 1435
Query: 972 LYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTKLCGINC 1027
LYPFLKGLMGRQNRTPTIVV+WS+LLASIFSLLWVRIDPF + GPD + CGINC
Sbjct: 1436 LYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEQCGINC 1603
>TC216172 homologue to UP|Q6J8X2 (Q6J8X2) Cellulose synthase, partial (37%)
Length = 1464
Score = 612 bits (1577), Expect = e-175
Identities = 282/380 (74%), Positives = 332/380 (87%), Gaps = 1/380 (0%)
Frame = +3
Query: 649 LKGMDD-DKEVLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAGMLKEAIHVISCGY 707
L+G +D +K LMSQ +FEK+FGQS +F+ STLME GG+P ++ ++KEAIHVISCGY
Sbjct: 24 LEGYEDLEKSSLMSQKSFEKRFGQSPVFIASTLMENGGLPEGTNSQSLVKEAIHVISCGY 203
Query: 708 EDKTEWGLEVGWIYGSITEDILTGFKMHCRGWRSIYCMPRRAAFKGTAPINLSDRLNQVL 767
E+KTEWG E+GWIYGS+TEDILTGFKMHCRGW+S+YCMP+R AFKG+APINLSDRL+QVL
Sbjct: 204 EEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVL 383
Query: 768 RWALGSIEIFFSHHCPLWYGYKEKKLKWLERFAYANTTIYPFTSIPLVAYCVLPAVCLLT 827
RWALGS+EIF S HCPLWYGY K LK+L+R AY NT +YP+TSIPL+AYC +PAVCLLT
Sbjct: 384 RWALGSVEIFLSRHCPLWYGYGGK-LKYLQRMAYTNTIVYPWTSIPLLAYCTIPAVCLLT 560
Query: 828 DKFIMPPISTFAGLYFIALFSSIIATGVIELKWSGVSIEEWWRNEQFWVIGGVSAHLFAV 887
KFI+P ++ A ++F+ALF SII T V+EL+WSGV+IE WRNEQFWVIGGVSAHLFAV
Sbjct: 561 GKFIIPTLNNLASIWFMALFISIILTSVLELRWSGVTIEALWRNEQFWVIGGVSAHLFAV 740
Query: 888 IQGLLKVLAGIDTNFTVTSKATDDEDFGELYAIKWTTLLIPPTTILIINIVGVVAGVSDA 947
QGLLKVL G+DTNFTVT+KA +D +FGELY KWTTLLIPPTT++I+NIVGVVAGVSDA
Sbjct: 741 FQGLLKVLGGVDTNFTVTAKAAEDTEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDA 920
Query: 948 INNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVR 1007
INNGY SWGPLFGKLFF+FWVIVHLYPFLKGLMG+QNRTPTIVV+WS+LLASIFSL+WVR
Sbjct: 921 INNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVR 1100
Query: 1008 IDPFVLKTKGPDTKLCGINC 1027
IDPF+ K GP K CG+ C
Sbjct: 1101 IDPFLPKQTGPVLKQCGVEC 1160
>TC217784 similar to UP|P93155 (P93155) Cellulose synthase , partial (36%)
Length = 1341
Score = 561 bits (1447), Expect = e-160
Identities = 256/345 (74%), Positives = 298/345 (86%)
Frame = +2
Query: 683 EGGVPPSSSPAGMLKEAIHVISCGYEDKTEWGLEVGWIYGSITEDILTGFKMHCRGWRSI 742
EGG+P SS P+ ++KEAIHVISCGYE+KT WG E+GWIYGS+TEDILTGFKM CRGWRS+
Sbjct: 5 EGGLPESSDPSMLIKEAIHVISCGYEEKTAWGKEIGWIYGSVTEDILTGFKMQCRGWRSV 184
Query: 743 YCMPRRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPLWYGYKEKKLKWLERFAYA 802
YCMP R AFKG+APINLSDRL+QVLRWALGS+EIFFS HCPLWYG+ +LKWL+R AY
Sbjct: 185 YCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYGFAGGRLKWLQRLAYI 364
Query: 803 NTTIYPFTSIPLVAYCVLPAVCLLTDKFIMPPISTFAGLYFIALFSSIIATGVIELKWSG 862
NT +YPFTS+PLVAYC LPA+CLLT KFI+P +S A F+ LF SII T V+EL+WSG
Sbjct: 365 NTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNLASALFLGLFLSIIVTSVLELRWSG 544
Query: 863 VSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEDFGELYAIKW 922
V+IE WRNEQFWVIGGVSAHLFAV QG LK+LAG+DTNFTVT+KA DD +FGELY IKW
Sbjct: 545 VTIEALWRNEQFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVTAKAADDTEFGELYIIKW 724
Query: 923 TTLLIPPTTILIINIVGVVAGVSDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGR 982
TTLLIPPTT++IINIVGVVAG SDA+N GY+SWGPLFGK+FF+FWVI HLYPFLKGLMGR
Sbjct: 725 TTLLIPPTTLIIINIVGVVAGFSDALNGGYESWGPLFGKVFFAFWVIFHLYPFLKGLMGR 904
Query: 983 QNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGPDTKLCGINC 1027
QNRTPTIV++WSVLLAS+FSL+WV+I+PF+ + PD+ C
Sbjct: 905 QNRTPTIVILWSVLLASVFSLVWVKINPFISR---PDSASISQTC 1030
>TC215149 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase catalytic subunit,
partial (29%)
Length = 1265
Score = 547 bits (1410), Expect = e-156
Identities = 253/315 (80%), Positives = 285/315 (90%), Gaps = 1/315 (0%)
Frame = +2
Query: 714 GLEVGWIYGSITEDILTGFKMHCRGWRSIYCMPRRAAFKGTAPINLSDRLNQVLRWALGS 773
G E+GWIYGS+TEDILTGFKMH RGWRSIYCMP+R AFKG+APINLSDRLNQVLRWALGS
Sbjct: 2 GSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGS 181
Query: 774 IEIFFSHHCPLWYGYKEKKLKWLERFAYANTTIYPFTSIPLVAYCVLPAVCLLTDKFIMP 833
+EI FS HCP+WYGY + LKWLERFAY NTTIYP T+IPL+ YC+LPAVCLLT+KFI+P
Sbjct: 182 VEILFSRHCPIWYGYGGR-LKWLERFAYVNTTIYPVTAIPLLIYCILPAVCLLTNKFIIP 358
Query: 834 PISTFAGLYFIALFSSIIATGVIELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLK 893
IS A ++FI+LF SI ATG++E++WSGV I+EWWRNEQFWVIGGVSAHLFAV QGLLK
Sbjct: 359 QISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLK 538
Query: 894 VLAGIDTNFTVTSKATDDE-DFGELYAIKWTTLLIPPTTILIINIVGVVAGVSDAINNGY 952
VLAGIDTNFTVTSKA+D++ DF ELY KWTTLLIPPTT+LIIN+VGVVAG+S AIN+GY
Sbjct: 539 VLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAINSGY 718
Query: 953 QSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFV 1012
QSWGPLFGKLFF+FWVI+HLYPFLKGLMGRQNRTPTIVV+WSVLLASIFSLLWVRIDPF
Sbjct: 719 QSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDPFT 898
Query: 1013 LKTKGPDTKLCGINC 1027
+ GPD + CGINC
Sbjct: 899 TRVTGPDVEECGINC 943
>TC230955 homologue to UP|Q6XP46 (Q6XP46) Cellulose synthase, partial (26%)
Length = 862
Score = 389 bits (998), Expect = e-108
Identities = 192/270 (71%), Positives = 220/270 (81%), Gaps = 19/270 (7%)
Frame = +3
Query: 191 WKDRMDDWKLQQ------------------GNLGPEADEDTDASML-DEARQPLSRKVPI 231
WK+R+D WK++Q G++ D D S+L DEARQPLSRKV I
Sbjct: 51 WKERVDGWKMKQEKNVVPMSTGQAASERGAGDIDASTDVLVDDSLLNDEARQPLSRKVSI 230
Query: 232 ASSKINPYRMVIVARLVILAFFLRYRILNPVHDALGLWLTSIICEIWFAFSWILDQFPKW 291
SS+INPYRMVI+ RLVIL FL YRI NPV +A LWL S+ICEIWFA SWILDQFPKW
Sbjct: 231 PSSRINPYRMVIMLRLVILCIFLHYRITNPVPNAYPLWLVSVICEIWFAISWILDQFPKW 410
Query: 292 FPIDRETYLDRLSIRYEREGEPNMLAPVDFFVSTVDPMKEPPLVTANTILSILAVDYPVD 351
P++RETYLDRL++RY+REGEP+ LA VD FVST DP+KEPPLVTANT+LSILAVDYPVD
Sbjct: 411 LPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTGDPLKEPPLVTANTVLSILAVDYPVD 590
Query: 352 KVSCYISDDGASMCTFEALSETAEFARKWVPFCKKFSIEPRAPEMYFSEKIDYLKDKVQP 411
KVSCY+SDDGA+M TFEAL+ET+EFARKWVPF KK+SIEPRAPE YFS+KIDYLKDKV P
Sbjct: 591 KVSCYVSDDGAAMLTFEALAETSEFARKWVPFSKKYSIEPRAPEWYFSQKIDYLKDKVHP 770
Query: 412 TFVKERRAMKREYEEFKVRINALVAKAQKV 441
+FVK+RRAMKREYEEFKVRIN LV+KAQKV
Sbjct: 771 SFVKDRRAMKREYEEFKVRINGLVSKAQKV 860
>TC211132 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase catalytic
subunit, partial (19%)
Length = 615
Score = 342 bits (877), Expect = 5e-94
Identities = 159/203 (78%), Positives = 183/203 (89%)
Frame = +2
Query: 229 VPIASSKINPYRMVIVARLVILAFFLRYRILNPVHDALGLWLTSIICEIWFAFSWILDQF 288
V I SS+INPYRMVI RLVIL FL YRI NPV +A LWL S+ICEIWFA SWILDQF
Sbjct: 5 VSIPSSRINPYRMVIALRLVILCIFLHYRITNPVPNAYALWLISVICEIWFAISWILDQF 184
Query: 289 PKWFPIDRETYLDRLSIRYEREGEPNMLAPVDFFVSTVDPMKEPPLVTANTILSILAVDY 348
PKW P++RETYLDRL++RY++EGEP+ LA VD FVSTVDP+KEPPLVTANT+LSIL+VDY
Sbjct: 185 PKWLPVNRETYLDRLALRYDQEGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILSVDY 364
Query: 349 PVDKVSCYISDDGASMCTFEALSETAEFARKWVPFCKKFSIEPRAPEMYFSEKIDYLKDK 408
PVDKVSCY+SDDGA+M TFEAL+ET+EFARKWVPF KK+SIEPRAPE YF++KIDYLKDK
Sbjct: 365 PVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFSKKYSIEPRAPEWYFAQKIDYLKDK 544
Query: 409 VQPTFVKERRAMKREYEEFKVRI 431
VQP+FVK+RRAMKREYEEFK+R+
Sbjct: 545 VQPSFVKDRRAMKREYEEFKIRV 613
>TC230957 homologue to UP|Q6J8W8 (Q6J8W8) Cellulose synthase, partial (18%)
Length = 593
Score = 329 bits (844), Expect = 3e-90
Identities = 144/198 (72%), Positives = 172/198 (86%)
Frame = +3
Query: 679 TLMEEGGVPPSSSPAGMLKEAIHVISCGYEDKTEWGLEVGWIYGSITEDILTGFKMHCRG 738
TL++ GGVP SPA +LKEAI VISCGYEDKTEWG EVGWIYGS+TEDILTGFKMHC G
Sbjct: 3 TLLDNGGVPQGVSPASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHG 182
Query: 739 WRSIYCMPRRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPLWYGYKEKKLKWLER 798
WRS+YC+P+R AFKG+APINLSDRL+QVLRWALGS+EIFFS HCP+WYGY LKWLER
Sbjct: 183 WRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPIWYGY-GGGLKWLER 359
Query: 799 FAYANTTIYPFTSIPLVAYCVLPAVCLLTDKFIMPPISTFAGLYFIALFSSIIATGVIEL 858
F+Y N+ +YP+TS+PL+ YC LPA+CLLT KFI+P IS +A + F+ALF SI ATG++E+
Sbjct: 360 FSYINSVVYPWTSLPLLVYCTLPAICLLTGKFIVPEISNYASIVFMALFISIAATGILEM 539
Query: 859 KWSGVSIEEWWRNEQFWV 876
+W GVSI++WWRNEQFWV
Sbjct: 540 QWGGVSIDDWWRNEQFWV 593
>TC215804 homologue to UP|Q6YBV2 (Q6YBV2) Cellulose synthase, partial (17%)
Length = 825
Score = 312 bits (800), Expect = 4e-85
Identities = 146/191 (76%), Positives = 166/191 (86%), Gaps = 1/191 (0%)
Frame = +1
Query: 838 FAGLYFIALFSSIIATGVIELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAG 897
FA ++FI LF SI T ++EL+WSGVSIE+WWRNEQFWVIGG SAHLFAV QGLLKVLAG
Sbjct: 1 FASMWFILLFVSIFTTSILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAG 180
Query: 898 IDTNFTVTSKATDDE-DFGELYAIKWTTLLIPPTTILIINIVGVVAGVSDAINNGYQSWG 956
IDTNFTVTSKA+D++ DF ELY KWT+LLIPPTT+LI+N+VG+VAGVS AIN+GYQSWG
Sbjct: 181 IDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSYAINSGYQSWG 360
Query: 957 PLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTK 1016
PLFGKLFF+ WVI HLYPFLKGL+GRQNRTPTIV++WSVLLASIFSLLWVRIDPF +
Sbjct: 361 PLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVRIDPFTSDSN 540
Query: 1017 GPDTKLCGINC 1027
CGINC
Sbjct: 541 KLTNGQCGINC 573
>TC230969 homologue to UP|Q8GUZ9 (Q8GUZ9) Cellulose synthase-like protein D4
(Fragment), partial (29%)
Length = 947
Score = 310 bits (794), Expect = 2e-84
Identities = 167/308 (54%), Positives = 201/308 (65%), Gaps = 52/308 (16%)
Frame = +3
Query: 316 LAPVDFFVSTVDPMKEPPLVTANTILSILAVDYPVDKVSCYISDDGASMCTFEALSETAE 375
L +D FVST DP KEPPLVTANTILSILA DYPV+K+SCY+SDDG ++ TFEA++E A
Sbjct: 30 LPGIDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAAS 209
Query: 376 FARKWVPFCKKFSIEPRAPEMYFSEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINAL- 434
FA WVPFC+K IEPR PE YF+ K D K+KV+P FVK+RR +KREY+EFKVRIN+L
Sbjct: 210 FANVWVPFCRKHDIEPRNPESYFNLKRDPYKNKVKPDFVKDRRRVKREYDEFKVRINSLP 389
Query: 435 -----------------VAKAQ------------KVPPEGWIMQDGTPWPG--------N 457
K Q K+P W M DGT WPG +
Sbjct: 390 ESIRRRSDAYHAREEIKAMKVQRQNREDEPLETVKIPKATW-MADGTHWPGTWLSPTSEH 566
Query: 458 NTKDHPGMIQVFLGNSGGVDTEGN--------------QLPRLVYVSREKRPGFQHHKKA 503
+ DH G+IQV L G+ +LP LVYVSREKRPG+ H+KKA
Sbjct: 567 SKGDHAGIIQVMLKPPSDEPLLGSADDTRLIDLTDVDIRLPLLVYVSREKRPGYDHNKKA 746
Query: 504 GAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQTGKKVCYVQFPQRFD 563
GAMNALVR SA+++N PF+LNLDCDHYI NSKA+RE MCF+MD + G ++CYVQFPQRF+
Sbjct: 747 GAMNALVRASAIMSNGPFILNLDCDHYIYNSKAMREGMCFMMD-RGGDRLCYVQFPQRFE 923
Query: 564 GIDTHDRY 571
GID DRY
Sbjct: 924 GIDPSDRY 947
>TC206323 similar to UP|Q6J8X1 (Q6J8X1) Cellulose synthase, partial (18%)
Length = 976
Score = 291 bits (745), Expect = 1e-78
Identities = 132/210 (62%), Positives = 168/210 (79%)
Frame = +2
Query: 818 CVLPAVCLLTDKFIMPPISTFAGLYFIALFSSIIATGVIELKWSGVSIEEWWRNEQFWVI 877
C L L+ F IS +A + F+ALF SI ATG++E++W GV I +WWR EQFWVI
Sbjct: 104 CTLWCFKLMLFFFFSSQISNYASIIFMALFISIAATGILEMQWGGVGIHDWWRKEQFWVI 283
Query: 878 GGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEDFGELYAIKWTTLLIPPTTILIINI 937
GG S+HLFA+ QGLLKVLAG++TNFTVTSKA DD +F +LY KWT+LLIPP T+LIINI
Sbjct: 284 GGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGEFADLYIFKWTSLLIPPLTLLIINI 463
Query: 938 VGVVAGVSDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLL 997
+GV+ GVSDAINNGY SWGPLFG+LFF+ WVIVHLYPFLKG+MG+Q PTI+++W++LL
Sbjct: 464 IGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGVMGKQEGVPTIILVWAILL 643
Query: 998 ASIFSLLWVRIDPFVLKTKGPDTKLCGINC 1027
+SI +LLWVRI+PF+ K+ ++CG+NC
Sbjct: 644 SSILTLLWVRINPFLAKS-DVVLEICGLNC 730
>AW186367 similar to GP|23534479|g cellulose synthase {Populus tremuloides},
partial (13%)
Length = 431
Score = 283 bits (725), Expect = 2e-76
Identities = 133/140 (95%), Positives = 137/140 (97%)
Frame = +1
Query: 421 KREYEEFKVRINALVAKAQKVPPEGWIMQDGTPWPGNNTKDHPGMIQVFLGNSGGVDTEG 480
+REYEEFKVRINALVAKAQKVP GWIMQDGTPWPGNNTKDHPGMIQVFLG+SGG+DTEG
Sbjct: 10 QREYEEFKVRINALVAKAQKVPQGGWIMQDGTPWPGNNTKDHPGMIQVFLGSSGGLDTEG 189
Query: 481 NQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREA 540
NQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHY+NNSKA REA
Sbjct: 190 NQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYVNNSKAAREA 369
Query: 541 MCFLMDPQTGKKVCYVQFPQ 560
MCFLMDPQTGKKVCYVQFPQ
Sbjct: 370 MCFLMDPQTGKKVCYVQFPQ 429
>TC231157 similar to GB|CAC82909.1|25136916|ATH297948 cellulose synthase-like
protein {Arabidopsis thaliana;} , partial (23%)
Length = 932
Score = 269 bits (687), Expect = 5e-72
Identities = 122/256 (47%), Positives = 182/256 (70%), Gaps = 4/256 (1%)
Frame = +1
Query: 759 LSDRLNQVLRWALGSIEIFFSHHCPLWYGYKEKKLKWLERFAYANTTIYPFTSIPLVAYC 818
++DRL+QVLRWA GS+EIFFS + L ++K+L+R AY N +YPFTS+ L+ YC
Sbjct: 16 VTDRLHQVLRWATGSVEIFFSRNNAL---LASPRMKFLQRVAYFNVGMYPFTSMFLIVYC 186
Query: 819 VLPAVCLLTDKFIMPPISTFAGLYFIALFSSIIATGVIELKWSGVSIEEWWRNEQFWVIG 878
LPAV L + +FI+ +S ++ + + ++ ++E+KWSG+++ +WWRNEQFW+IG
Sbjct: 187 FLPAVSLFSGQFIVQSLSATFLVFLLGITITLCLLALLEIKWSGITLHDWWRNEQFWLIG 366
Query: 879 GVSAHLFAVIQGLLKVLAGIDTNFTVTSKAT----DDEDFGELYAIKWTTLLIPPTTILI 934
G SAH AV+QGL KV+AG+D +FT+TSK+ D++F +LY +KW+ L++PP TI++
Sbjct: 367 GTSAHPVAVLQGL*KVIAGVDISFTLTSKSATPEDGDDEFADLYEVKWSFLMVPPITIMM 546
Query: 935 INIVGVVAGVSDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWS 994
+N + + GV+ + + + W L G +FFSFWV+ HLYPF KGLMGR+ + PTI+ +WS
Sbjct: 547 VNSIAIAVGVARTLYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRRGKVPTIIYVWS 726
Query: 995 VLLASIFSLLWVRIDP 1010
LL+ I SLLWV I+P
Sbjct: 727 GLLSIIISLLWVYINP 774
>CA800297 similar to GP|4886756|gb cellulose synthase catalytic subunit
{Arabidopsis thaliana}, partial (12%)
Length = 393
Score = 263 bits (673), Expect = 2e-70
Identities = 121/131 (92%), Positives = 127/131 (96%)
Frame = +1
Query: 739 WRSIYCMPRRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPLWYGYKEKKLKWLER 798
WRSIYCMP+RAAF GTAPINLSDRLNQVLRWALGSIEIFFS HCPLWYGYKE KLKWLER
Sbjct: 1 WRSIYCMPKRAAF*GTAPINLSDRLNQVLRWALGSIEIFFSRHCPLWYGYKEGKLKWLER 180
Query: 799 FAYANTTIYPFTSIPLVAYCVLPAVCLLTDKFIMPPISTFAGLYFIALFSSIIATGVIEL 858
FAYANTT+YPFTSIPLVAYCVLPAVCL +DKFIMPPISTFAGLYF+ALFSSIIATG++EL
Sbjct: 181 FAYANTTVYPFTSIPLVAYCVLPAVCLFSDKFIMPPISTFAGLYFVALFSSIIATGLLEL 360
Query: 859 KWSGVSIEEWW 869
KWSGVSIEEWW
Sbjct: 361 KWSGVSIEEWW 393
>TC216171 homologue to UP|Q6J8X2 (Q6J8X2) Cellulose synthase, partial (14%)
Length = 748
Score = 256 bits (653), Expect = 5e-68
Identities = 120/150 (80%), Positives = 133/150 (88%)
Frame = +2
Query: 878 GGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEDFGELYAIKWTTLLIPPTTILIINI 937
GGVSAHLFAV QGLLKVL G+DTNFTV A +D +FGELY KWTTLLIPPTT++I+NI
Sbjct: 2 GGVSAHLFAVFQGLLKVLGGVDTNFTVFF*AAEDTEFGELYLFKWTTLLIPPTTLIILNI 181
Query: 938 VGVVAGVSDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLL 997
VGVVAGVSDAINNGY SWGPLFGKLFF+FWVIVHLYPFLKGLMG+QNRTPTIVV+WS+LL
Sbjct: 182 VGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILL 361
Query: 998 ASIFSLLWVRIDPFVLKTKGPDTKLCGINC 1027
ASIFSL+WVRIDPF+ K GP K CG+ C
Sbjct: 362 ASIFSLIWVRIDPFLPKQTGPVLKQCGVEC 451
>TC219881 homologue to UP|Q9SWW6 (Q9SWW6) Cellulose synthase catalytic subunit
(IRX3) (AT5g17420/T10B6_80), partial (13%)
Length = 589
Score = 254 bits (649), Expect = 1e-67
Identities = 121/129 (93%), Positives = 123/129 (94%)
Frame = +3
Query: 899 DTNFTVTSKATDDEDFGELYAIKWTTLLIPPTTILIINIVGVVAGVSDAINNGYQSWGPL 958
DT T TSKATDDE+FGELY KWTTLLIPPTTILIINIVGVVAG+SDAINNGYQSWGPL
Sbjct: 3 DTXXTXTSKATDDEEFGELYTFKWTTLLIPPTTILIINIVGVVAGISDAINNGYQSWGPL 182
Query: 959 FGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKTKGP 1018
FGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLK KGP
Sbjct: 183 FGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKNKGP 362
Query: 1019 DTKLCGINC 1027
DTKLCGINC
Sbjct: 363 DTKLCGINC 389
>AI960925 homologue to GP|23534479|g cellulose synthase {Populus
tremuloides}, partial (11%)
Length = 374
Score = 253 bits (645), Expect = 4e-67
Identities = 117/124 (94%), Positives = 122/124 (98%)
Frame = +3
Query: 661 SQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAGMLKEAIHVISCGYEDKTEWGLEVGWI 720
+ +NFEKKFGQSSIFVTSTLMEEGGVPPSSSPA +LKEAIHVISCGYEDKTEWGLE+GWI
Sbjct: 3 ASVNFEKKFGQSSIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTEWGLELGWI 182
Query: 721 YGSITEDILTGFKMHCRGWRSIYCMPRRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSH 780
YGSITEDILTGFKMHCRGWRSIYCMP+RAAFKGTAPINLSDRLNQVLRWALGSIEIFFSH
Sbjct: 183 YGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSH 362
Query: 781 HCPL 784
HCPL
Sbjct: 363 HCPL 374
>BU081134 homologue to GP|4886756|gb cellulose synthase catalytic subunit
{Arabidopsis thaliana}, partial (11%)
Length = 421
Score = 252 bits (643), Expect = 7e-67
Identities = 113/122 (92%), Positives = 120/122 (97%)
Frame = +2
Query: 716 EVGWIYGSITEDILTGFKMHCRGWRSIYCMPRRAAFKGTAPINLSDRLNQVLRWALGSIE 775
++GWIYGSITEDILTGFKMHCRGWRSIYCMP+RAAFKGTAPINLSDRLNQVLRWALGSIE
Sbjct: 2 QLGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGTAPINLSDRLNQVLRWALGSIE 181
Query: 776 IFFSHHCPLWYGYKEKKLKWLERFAYANTTIYPFTSIPLVAYCVLPAVCLLTDKFIMPPI 835
IFFS HCPLWYGYKE KLKWLERFAYANTT+YPFTSIPLVAYCVLPAVCLLTDKFIMPP+
Sbjct: 182 IFFSRHCPLWYGYKEGKLKWLERFAYANTTVYPFTSIPLVAYCVLPAVCLLTDKFIMPPV 361
Query: 836 ST 837
++
Sbjct: 362 TS 367
>AW279531 homologue to PIR|T10800|T10 cellulose synthase (EC 2.4.1.-)
catalytic chain celA2 - upland cotton (fragment),
partial (19%)
Length = 406
Score = 251 bits (641), Expect = 1e-66
Identities = 112/134 (83%), Positives = 126/134 (93%)
Frame = +3
Query: 430 RINALVAKAQKVPPEGWIMQDGTPWPGNNTKDHPGMIQVFLGNSGGVDTEGNQLPRLVYV 489
+IN+LVAKAQK P EGW+MQDGTPWPGNNT+DHPGMIQV+LG++G +D EG +LP+LVY+
Sbjct: 3 KINSLVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPKLVYI 182
Query: 490 SREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQT 549
SREKRPG+ HHKKAGAMNALVRVSAVLTNAPFMLNLDCDHY+NNSKAVREAMCFLMDP
Sbjct: 183 SREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYVNNSKAVREAMCFLMDPNL 362
Query: 550 GKKVCYVQFPQRFD 563
GKK+CYVQFPQRFD
Sbjct: 363 GKKLCYVQFPQRFD 404
>TC220504 similar to UP|Q8GUZ9 (Q8GUZ9) Cellulose synthase-like protein D4
(Fragment), partial (20%)
Length = 736
Score = 250 bits (639), Expect = 2e-66
Identities = 133/256 (51%), Positives = 171/256 (65%), Gaps = 24/256 (9%)
Frame = +1
Query: 511 RVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQTGKKVCYVQFPQRFDGIDTHDR 570
R SA+++N PF+LNLDCDHYI NS+A+RE MCF+MD + G ++CYVQFPQRF+GID +DR
Sbjct: 1 RASAIMSNGPFILNLDCDHYIYNSQALREGMCFMMD-RGGDRLCYVQFPQRFEGIDPNDR 177
Query: 571 YANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYNPPKGPKRPKMVSCDCCPCFG 630
YAN NTVFFD+NM+ LDGIQGPVYVGTGC+FRR ALYG++PP+ + FG
Sbjct: 178 YANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPRIKEESGW--------FG 333
Query: 631 SRKKLKH---AKSDVNGEAASLK-GMDDDKEVLMSQMNFEKKFGQSSIFVTSTLMEE--- 683
+ K + S+ + E SL+ G +D+E M+ KKFG SS+ V S + E
Sbjct: 334 RKNKKSSTVASVSEASAEEQSLRNGRIEDEE--MTSALVPKKFGNSSLLVDSVRVAEFQG 507
Query: 684 ----------GGVPPSS-------SPAGMLKEAIHVISCGYEDKTEWGLEVGWIYGSITE 726
G PP + A + EAI+VISC YEDKTEWGL VGWIYGS+TE
Sbjct: 508 LPLADHSSIKYGRPPGALTLPRDPLDAATVAEAINVISCWYEDKTEWGLRVGWIYGSVTE 687
Query: 727 DILTGFKMHCRGWRSI 742
D++TG++MH RGW+SI
Sbjct: 688 DVVTGYRMHNRGWKSI 735
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.322 0.140 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,274,206
Number of Sequences: 63676
Number of extensions: 834200
Number of successful extensions: 4566
Number of sequences better than 10.0: 134
Number of HSP's better than 10.0 without gapping: 4417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4500
length of query: 1027
length of database: 12,639,632
effective HSP length: 107
effective length of query: 920
effective length of database: 5,826,300
effective search space: 5360196000
effective search space used: 5360196000
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0037a.7