
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0037a.5
(991 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC215803 homologue to UP|Q6YBV2 (Q6YBV2) Cellulose synthase, par... 737 0.0
TC215151 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase cata... 663 0.0
TC216172 homologue to UP|Q6J8X2 (Q6J8X2) Cellulose synthase, par... 494 e-139
TC217784 similar to UP|P93155 (P93155) Cellulose synthase , part... 471 e-133
TC215149 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase cata... 460 e-129
TC230955 homologue to UP|Q6XP46 (Q6XP46) Cellulose synthase, par... 345 7e-95
TC211132 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase cata... 312 4e-85
TC230957 homologue to UP|Q6J8W8 (Q6J8W8) Cellulose synthase, par... 274 2e-73
TC230969 homologue to UP|Q8GUZ9 (Q8GUZ9) Cellulose synthase-like... 270 2e-72
TC226365 weakly similar to UP|Q944E4 (Q944E4) Cellulose synthase... 263 3e-70
TC215804 homologue to UP|Q6YBV2 (Q6YBV2) Cellulose synthase, par... 261 8e-70
TC206323 similar to UP|Q6J8X1 (Q6J8X1) Cellulose synthase, parti... 236 3e-62
TC231157 similar to GB|CAC82909.1|25136916|ATH297948 cellulose s... 232 5e-61
BM143179 homologue to GP|6446577|gb cellulose synthase catalytic... 231 2e-60
TC229133 weakly similar to UP|Q944E4 (Q944E4) Cellulose synthase... 223 2e-58
AW186367 similar to GP|23534479|g cellulose synthase {Populus tr... 214 1e-55
CA800297 similar to GP|4886756|gb cellulose synthase catalytic s... 213 3e-55
TC219881 homologue to UP|Q9SWW6 (Q9SWW6) Cellulose synthase cata... 208 1e-53
TC220504 similar to UP|Q8GUZ9 (Q8GUZ9) Cellulose synthase-like p... 207 1e-53
AI438079 similar to GP|27462651|g cellulose synthase {Arabidopsi... 207 1e-53
>TC215803 homologue to UP|Q6YBV2 (Q6YBV2) Cellulose synthase, partial (57%)
Length = 2145
Score = 737 bits (1902), Expect = 0.0
Identities = 353/620 (56%), Positives = 456/620 (72%), Gaps = 35/620 (5%)
Frame = +3
Query: 407 RINALVAKSLRVPPEGWTLKDETPWPGNNTKDHPSMIQILLGHSEG--HEGNELPCLIYI 464
RINALVAK+ ++P EGWT++D T WPGNN +DHP MI + LGHS G +GNELP L+Y+
Sbjct: 3 RINALVAKAQKMPEEGWTMQDGTAWPGNNPRDHPGMIHVFLGHSGGLDTDGNELPRLVYV 182
Query: 465 SREKRPAFQHHSKAGAMNALLRVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQF 524
SREKRP FQHH KAGAMNAL+RVSAVL+N ++LN+DC+HY NNSK ++EAMCF MD
Sbjct: 183 SREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPVI 362
Query: 525 GNSIGFVQFPLRFDSLDRNDRYANKNTVLFDINLRCQDGLQGPAYIGSACIFRRKALNGF 584
G +VQFP RFD +D +DRYAN+N V FDIN++ QDG+QGP Y+G+ C F R+AL G+
Sbjct: 363 GKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGQDGVQGPVYVGTGCCFNRQALYGY 542
Query: 585 DP--------------------------------PKASKRQREVQVHSKQDESGEDGSIK 612
DP K + + E V E E+G
Sbjct: 543 DPVLTEEDLEPNIIVKSCWGSRKKGKGGNKKYSDKKKAMGRTESTVPIFNMEDIEEG--V 716
Query: 613 EATDEDKQLLKSHMNVENKFGNSTLFMNSSLTEEGGVDPSSSQEALLKEAIHVLSCRYED 672
E D+++ LL S ++E +FG S +F+ ++ E+GG+ PS++ LLKEAIHV+SC YED
Sbjct: 717 EGYDDERTLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYED 896
Query: 673 RTLWGYEVGLSYGSIAADVLTSLKLHSRGWRSVYCMPKRAAFRGTAPINLTERLNQVLRW 732
+T WG E+G YGS+ D+LT K+H+RGW S+YCMP R AF+G+APINL++RLNQVLRW
Sbjct: 897 KTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRW 1076
Query: 733 AVGSLEILFSRHCPIWYGFKEGRLKGLQRIAYINSTVYPFSSIPLLIYCLIPAICLLTDK 792
A+GS+EI SRHCP+WYG+ G+LK L R+AYIN+ VYPF+SIPL+ YC +PA CLLT+K
Sbjct: 1077ALGSIEIFLSRHCPLWYGY-NGKLKPLMRLAYINTIVYPFTSIPLIAYCTLPAFCLLTNK 1253
Query: 793 FITPSVDTFASMIIISLFISIFGSAILELRWSGVSLEEWWRSQQFWVIGSVSAHLFAVAQ 852
FI P + FASM I LF+SIF ++ILELRWSGVS+E+WWR++QFWVIG SAHLFAV Q
Sbjct: 1254FIIPEISNFASMWFILLFVSIFTTSILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQ 1433
Query: 853 ALMGGLAKKVNKNFSVVSKAPD-DEEFHELYTIRWTALLVPPTTIIIINLIGVVAGFTDA 911
L+ LA ++ NF+V SKA D D +F ELY +WT+LL+PPTT++I+NL+G+VAG + A
Sbjct: 1434GLLKVLA-GIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSYA 1610
Query: 912 INSGAHSYGALLGKLFFSLWVIAHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVR 971
INSG S+G L GKLFF++WVIAHLYPFLKGL+GRQNRTPT++++WSVLLASIFSL+WVR
Sbjct: 1611INSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVR 1790
Query: 972 LDPFVLKTKGPDVKQCGISC 991
+DPF + QCGI+C
Sbjct: 1791IDPFTSDSNKLTNGQCGINC 1850
>TC215151 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase catalytic
subunit, partial (50%)
Length = 2007
Score = 663 bits (1711), Expect = 0.0
Identities = 315/536 (58%), Positives = 405/536 (74%), Gaps = 33/536 (6%)
Frame = +2
Query: 489 AVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQFGNSIGFVQFPLRFDSLDRNDRYAN 548
AVL+N PF+LNLDC+HY+NNSK +REAMCF MD G ++ +VQFP RFD +DRNDRYAN
Sbjct: 2 AVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRNDRYAN 181
Query: 549 KNTVLFDINLRCQDGLQGPAYIGSACIFRRKALNGFDPPKASKRQREVQVHS-------K 601
+NTV FDINLR DG+QGP Y+G+ C+F R AL G++PP K ++ + S K
Sbjct: 182 RNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPKHKKPGFLSSLCGGNRKK 361
Query: 602 QDESGEDGSIKEAT-------------------------DEDKQLLKSHMNVENKFGNST 636
+ +S + GS K+ + D++K LL S M++E +FG S
Sbjct: 362 RSKSSKKGSDKKKSSKNVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSA 541
Query: 637 LFMNSSLTEEGGVDPSSSQEALLKEAIHVLSCRYEDRTLWGYEVGLSYGSIAADVLTSLK 696
+F+ S+L E GGV S++ E LLKEAIHV+SC YED++ WG E+G YGS+ D+LT K
Sbjct: 542 VFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKSEWGSEIGWIYGSVTEDILTGFK 721
Query: 697 LHSRGWRSVYCMPKRAAFRGTAPINLTERLNQVLRWAVGSLEILFSRHCPIWYGFKEGRL 756
+H+RGWRS+YCMPK AF+G+APINL++RLNQVLRWA+GS+EILFSRHCPIWYG+ GRL
Sbjct: 722 MHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGY-SGRL 898
Query: 757 KGLQRIAYINSTVYPFSSIPLLIYCLIPAICLLTDKFITPSVDTFASMIIISLFISIFGS 816
K L+R AY+N+T+YP +SIPLL+YC +PA+CLLT+KFI P + AS+ ISLF+SIF +
Sbjct: 899 KWLERFAYVNTTIYPVTSIPLLMYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFAT 1078
Query: 817 AILELRWSGVSLEEWWRSQQFWVIGSVSAHLFAVAQALMGGLAKKVNKNFSVVSKAPD-D 875
ILE+RWSGV ++EWWR++QFWVIG VSAHLFAV Q L+ LA ++ NF+V SKA D D
Sbjct: 1079GILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLA-GIDTNFTVTSKASDED 1255
Query: 876 EEFHELYTIRWTALLVPPTTIIIINLIGVVAGFTDAINSGAHSYGALLGKLFFSLWVIAH 935
+F ELY +WT LL+PPTT++IINL+GVVAG + AINSG S+G L GKLFF+ WVI H
Sbjct: 1256GDFAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIH 1435
Query: 936 LYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRLDPFVLKTKGPDVKQCGISC 991
LYPFLKGLMGRQNRTPT++V+WS+LLASIFSL+WVR+DPF + GPDV+QCGI+C
Sbjct: 1436LYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEQCGINC 1603
>TC216172 homologue to UP|Q6J8X2 (Q6J8X2) Cellulose synthase, partial (37%)
Length = 1464
Score = 494 bits (1271), Expect = e-139
Identities = 228/376 (60%), Positives = 301/376 (79%)
Frame = +3
Query: 616 DEDKQLLKSHMNVENKFGNSTLFMNSSLTEEGGVDPSSSQEALLKEAIHVLSCRYEDRTL 675
D +K L S + E +FG S +F+ S+L E GG+ ++ ++L+KEAIHV+SC YE++T
Sbjct: 39 DLEKSSLMSQKSFEKRFGQSPVFIASTLMENGGLPEGTNSQSLVKEAIHVISCGYEEKTE 218
Query: 676 WGYEVGLSYGSIAADVLTSLKLHSRGWRSVYCMPKRAAFRGTAPINLTERLNQVLRWAVG 735
WG E+G YGS+ D+LT K+H RGW+SVYCMPKR AF+G+APINL++RL+QVLRWA+G
Sbjct: 219 WGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALG 398
Query: 736 SLEILFSRHCPIWYGFKEGRLKGLQRIAYINSTVYPFSSIPLLIYCLIPAICLLTDKFIT 795
S+EI SRHCP+WYG+ G+LK LQR+AY N+ VYP++SIPLL YC IPA+CLLT KFI
Sbjct: 399 SVEIFLSRHCPLWYGYG-GKLKYLQRMAYTNTIVYPWTSIPLLAYCTIPAVCLLTGKFII 575
Query: 796 PSVDTFASMIIISLFISIFGSAILELRWSGVSLEEWWRSQQFWVIGSVSAHLFAVAQALM 855
P+++ AS+ ++LFISI +++LELRWSGV++E WR++QFWVIG VSAHLFAV Q L+
Sbjct: 576 PTLNNLASIWFMALFISIILTSVLELRWSGVTIEALWRNEQFWVIGGVSAHLFAVFQGLL 755
Query: 856 GGLAKKVNKNFSVVSKAPDDEEFHELYTIRWTALLVPPTTIIIINLIGVVAGFTDAINSG 915
L V+ NF+V +KA +D EF ELY +WT LL+PPTT+II+N++GVVAG +DAIN+G
Sbjct: 756 KVLGG-VDTNFTVTAKAAEDTEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINNG 932
Query: 916 AHSYGALLGKLFFSLWVIAHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRLDPF 975
S+G L GKLFF+ WVI HLYPFLKGLMG+QNRTPT++V+WS+LLASIFSL+WVR+DPF
Sbjct: 933 YGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPF 1112
Query: 976 VLKTKGPDVKQCGISC 991
+ K GP +KQCG+ C
Sbjct: 1113LPKQTGPVLKQCGVEC 1160
>TC217784 similar to UP|P93155 (P93155) Cellulose synthase , partial (36%)
Length = 1341
Score = 471 bits (1212), Expect = e-133
Identities = 216/345 (62%), Positives = 276/345 (79%)
Frame = +2
Query: 646 EGGVDPSSSQEALLKEAIHVLSCRYEDRTLWGYEVGLSYGSIAADVLTSLKLHSRGWRSV 705
EGG+ SS L+KEAIHV+SC YE++T WG E+G YGS+ D+LT K+ RGWRSV
Sbjct: 5 EGGLPESSDPSMLIKEAIHVISCGYEEKTAWGKEIGWIYGSVTEDILTGFKMQCRGWRSV 184
Query: 706 YCMPKRAAFRGTAPINLTERLNQVLRWAVGSLEILFSRHCPIWYGFKEGRLKGLQRIAYI 765
YCMP R AF+G+APINL++RL+QVLRWA+GS+EI FSRHCP+WYGF GRLK LQR+AYI
Sbjct: 185 YCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYGFAGGRLKWLQRLAYI 364
Query: 766 NSTVYPFSSIPLLIYCLIPAICLLTDKFITPSVDTFASMIIISLFISIFGSAILELRWSG 825
N+ VYPF+S+PL+ YC +PAICLLT KFI P++ AS + + LF+SI +++LELRWSG
Sbjct: 365 NTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNLASALFLGLFLSIIVTSVLELRWSG 544
Query: 826 VSLEEWWRSQQFWVIGSVSAHLFAVAQALMGGLAKKVNKNFSVVSKAPDDEEFHELYTIR 885
V++E WR++QFWVIG VSAHLFAV Q + LA V+ NF+V +KA DD EF ELY I+
Sbjct: 545 VTIEALWRNEQFWVIGGVSAHLFAVFQGFLKMLA-GVDTNFTVTAKAADDTEFGELYIIK 721
Query: 886 WTALLVPPTTIIIINLIGVVAGFTDAINSGAHSYGALLGKLFFSLWVIAHLYPFLKGLMG 945
WT LL+PPTT+IIIN++GVVAGF+DA+N G S+G L GK+FF+ WVI HLYPFLKGLMG
Sbjct: 722 WTTLLIPPTTLIIINIVGVVAGFSDALNGGYESWGPLFGKVFFAFWVIFHLYPFLKGLMG 901
Query: 946 RQNRTPTLIVIWSVLLASIFSLVWVRLDPFVLKTKGPDVKQCGIS 990
RQNRTPT++++WSVLLAS+FSLVWV+++PF+ + + Q IS
Sbjct: 902 RQNRTPTIVILWSVLLASVFSLVWVKINPFISRPDSASISQTCIS 1036
>TC215149 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase catalytic
subunit, partial (29%)
Length = 1265
Score = 460 bits (1184), Expect = e-129
Identities = 210/316 (66%), Positives = 266/316 (83%), Gaps = 1/316 (0%)
Frame = +2
Query: 677 GYEVGLSYGSIAADVLTSLKLHSRGWRSVYCMPKRAAFRGTAPINLTERLNQVLRWAVGS 736
G E+G YGS+ D+LT K+H+RGWRS+YCMPKR AF+G+APINL++RLNQVLRWA+GS
Sbjct: 2 GSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGS 181
Query: 737 LEILFSRHCPIWYGFKEGRLKGLQRIAYINSTVYPFSSIPLLIYCLIPAICLLTDKFITP 796
+EILFSRHCPIWYG+ GRLK L+R AY+N+T+YP ++IPLLIYC++PA+CLLT+KFI P
Sbjct: 182 VEILFSRHCPIWYGYG-GRLKWLERFAYVNTTIYPVTAIPLLIYCILPAVCLLTNKFIIP 358
Query: 797 SVDTFASMIIISLFISIFGSAILELRWSGVSLEEWWRSQQFWVIGSVSAHLFAVAQALMG 856
+ AS+ ISLF+SIF + ILE+RWSGV ++EWWR++QFWVIG VSAHLFAV Q L+
Sbjct: 359 QISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLK 538
Query: 857 GLAKKVNKNFSVVSKAPDDE-EFHELYTIRWTALLVPPTTIIIINLIGVVAGFTDAINSG 915
LA ++ NF+V SKA D++ +F ELY +WT LL+PPTT++IINL+GVVAG + AINSG
Sbjct: 539 VLAG-IDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAINSG 715
Query: 916 AHSYGALLGKLFFSLWVIAHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRLDPF 975
S+G L GKLFF+ WVI HLYPFLKGLMGRQNRTPT++V+WSVLLASIFSL+WVR+DPF
Sbjct: 716 YQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSVLLASIFSLLWVRIDPF 895
Query: 976 VLKTKGPDVKQCGISC 991
+ GPDV++CGI+C
Sbjct: 896 TTRVTGPDVEECGINC 943
>TC230955 homologue to UP|Q6XP46 (Q6XP46) Cellulose synthase, partial (26%)
Length = 862
Score = 345 bits (884), Expect = 7e-95
Identities = 164/269 (60%), Positives = 210/269 (77%), Gaps = 17/269 (6%)
Frame = +3
Query: 167 KEKTDDWKLNQG-NLWPETAAPVDPEKN----------------MNDETRQPLSRKVAIP 209
KE+ D WK+ Q N+ P + E+ +NDE RQPLSRKV+IP
Sbjct: 54 KERVDGWKMKQEKNVVPMSTGQAASERGAGDIDASTDVLVDDSLLNDEARQPLSRKVSIP 233
Query: 210 SGRLSPYRMMVVTRLLLLLLFIQYRIFHPVPDAIGLWLISVVCEIWLTLSWIVDQLPKWF 269
S R++PYRM+++ RL++L +F+ YRI +PVP+A LWL+SV+CEIW +SWI+DQ PKW
Sbjct: 234 SSRINPYRMVIMLRLVILCIFLHYRITNPVPNAYPLWLVSVICEIWFAISWILDQFPKWL 413
Query: 270 PIDRETYLDRLSIRFEPENKPNMLSPVDIFVTTVDPIKEPPLVTANTVLSILALDYPAHK 329
P++RETYLDRL++R++ E +P+ L+ VDIFV+T DP+KEPPLVTANTVLSILA+DYP K
Sbjct: 414 PVNRETYLDRLALRYDREGEPSQLAAVDIFVSTGDPLKEPPLVTANTVLSILAVDYPVDK 593
Query: 330 ISCYVSDDGASMLTFEALQETAEFARKWVPFCKKFSAEPRAPERYFSQKIDFLKDTLQST 389
+SCYVSDDGA+MLTFEAL ET+EFARKWVPF KK+S EPRAPE YFSQKID+LKD + +
Sbjct: 594 VSCYVSDDGAAMLTFEALAETSEFARKWVPFSKKYSIEPRAPEWYFSQKIDYLKDKVHPS 773
Query: 390 YVKERRTMKREYEEFKVRINALVAKSLRV 418
+VK+RR MKREYEEFKVRIN LV+K+ +V
Sbjct: 774 FVKDRRAMKREYEEFKVRINGLVSKAQKV 860
>TC211132 homologue to UP|Q9XGX6 (Q9XGX6) Cellulose synthase catalytic
subunit, partial (19%)
Length = 615
Score = 312 bits (800), Expect = 4e-85
Identities = 139/203 (68%), Positives = 178/203 (87%)
Frame = +2
Query: 206 VAIPSGRLSPYRMMVVTRLLLLLLFIQYRIFHPVPDAIGLWLISVVCEIWLTLSWIVDQL 265
V+IPS R++PYRM++ RL++L +F+ YRI +PVP+A LWLISV+CEIW +SWI+DQ
Sbjct: 5 VSIPSSRINPYRMVIALRLVILCIFLHYRITNPVPNAYALWLISVICEIWFAISWILDQF 184
Query: 266 PKWFPIDRETYLDRLSIRFEPENKPNMLSPVDIFVTTVDPIKEPPLVTANTVLSILALDY 325
PKW P++RETYLDRL++R++ E +P+ L+ VDIFV+TVDP+KEPPLVTANTVLSIL++DY
Sbjct: 185 PKWLPVNRETYLDRLALRYDQEGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILSVDY 364
Query: 326 PAHKISCYVSDDGASMLTFEALQETAEFARKWVPFCKKFSAEPRAPERYFSQKIDFLKDT 385
P K+SCYVSDDGA+MLTFEAL ET+EFARKWVPF KK+S EPRAPE YF+QKID+LKD
Sbjct: 365 PVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFSKKYSIEPRAPEWYFAQKIDYLKDK 544
Query: 386 LQSTYVKERRTMKREYEEFKVRI 408
+Q ++VK+RR MKREYEEFK+R+
Sbjct: 545 VQPSFVKDRRAMKREYEEFKIRV 613
>TC230957 homologue to UP|Q6J8W8 (Q6J8W8) Cellulose synthase, partial (18%)
Length = 593
Score = 274 bits (700), Expect = 2e-73
Identities = 121/198 (61%), Positives = 159/198 (80%)
Frame = +3
Query: 642 SLTEEGGVDPSSSQEALLKEAIHVLSCRYEDRTLWGYEVGLSYGSIAADVLTSLKLHSRG 701
+L + GGV S +LLKEAI V+SC YED+T WG EVG YGS+ D+LT K+H G
Sbjct: 3 TLLDNGGVPQGVSPASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHG 182
Query: 702 WRSVYCMPKRAAFRGTAPINLTERLNQVLRWAVGSLEILFSRHCPIWYGFKEGRLKGLQR 761
WRSVYC+PKR AF+G+APINL++RL+QVLRWA+GS+EI FSRHCPIWYG+ G LK L+R
Sbjct: 183 WRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPIWYGY-GGGLKWLER 359
Query: 762 IAYINSTVYPFSSIPLLIYCLIPAICLLTDKFITPSVDTFASMIIISLFISIFGSAILEL 821
+YINS VYP++S+PLL+YC +PAICLLT KFI P + +AS++ ++LFISI + ILE+
Sbjct: 360 FSYINSVVYPWTSLPLLVYCTLPAICLLTGKFIVPEISNYASIVFMALFISIAATGILEM 539
Query: 822 RWSGVSLEEWWRSQQFWV 839
+W GVS+++WWR++QFWV
Sbjct: 540 QWGGVSIDDWWRNEQFWV 593
>TC230969 homologue to UP|Q8GUZ9 (Q8GUZ9) Cellulose synthase-like protein D4
(Fragment), partial (29%)
Length = 947
Score = 270 bits (691), Expect = 2e-72
Identities = 144/308 (46%), Positives = 191/308 (61%), Gaps = 54/308 (17%)
Frame = +3
Query: 293 LSPVDIFVTTVDPIKEPPLVTANTVLSILALDYPAHKISCYVSDDGASMLTFEALQETAE 352
L +DIFV+T DP KEPPLVTANT+LSILA DYP K+SCYVSDDG ++LTFEA+ E A
Sbjct: 30 LPGIDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAAS 209
Query: 353 FARKWVPFCKKFSAEPRAPERYFSQKIDFLKDTLQSTYVKERRTMKREYEEFKVRINALV 412
FA WVPFC+K EPR PE YF+ K D K+ ++ +VK+RR +KREY+EFKVRIN+L
Sbjct: 210 FANVWVPFCRKHDIEPRNPESYFNLKRDPYKNKVKPDFVKDRRRVKREYDEFKVRINSLP 389
Query: 413 A------------------------------KSLRVPPEGWTLKDETPWPG--------N 434
+++++P W + D T WPG +
Sbjct: 390 ESIRRRSDAYHAREEIKAMKVQRQNREDEPLETVKIPKATW-MADGTHWPGTWLSPTSEH 566
Query: 435 NTKDHPSMIQI---------LLGHSEGHE-------GNELPCLIYISREKRPAFQHHSKA 478
+ DH +IQ+ LLG ++ LP L+Y+SREKRP + H+ KA
Sbjct: 567 SKGDHAGIIQVMLKPPSDEPLLGSADDTRLIDLTDVDIRLPLLVYVSREKRPGYDHNKKA 746
Query: 479 GAMNALLRVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQFGNSIGFVQFPLRFD 538
GAMNAL+R SA++SN PF+LNLDC+HY+ NSK +RE MCF MD + G+ + +VQFP RF+
Sbjct: 747 GAMNALVRASAIMSNGPFILNLDCDHYIYNSKAMREGMCFMMD-RGGDRLCYVQFPQRFE 923
Query: 539 SLDRNDRY 546
+D +DRY
Sbjct: 924 GIDPSDRY 947
>TC226365 weakly similar to UP|Q944E4 (Q944E4) Cellulose synthase-like
protein OsCslE1, partial (12%)
Length = 1722
Score = 263 bits (672), Expect = 3e-70
Identities = 173/616 (28%), Positives = 300/616 (48%), Gaps = 12/616 (1%)
Frame = +3
Query: 347 LQETAEFARKWVPFCKKFSAEPRAPERYFSQKIDFLKDTLQST-YVKERRTMKREYEEFK 405
++E AE A++WVPFC + + R P+ +FS + + TL+ + +R +K +YE+ +
Sbjct: 12 IREAAE*AKEWVPFCNIYGVKSRCPKVFFSPFGEEDQHTLRHDGFSTQRDLIKAKYEKMQ 191
Query: 406 VRINALVA--KSLRVPPEGWTLKDETPWPGNNTKDHPSMIQILLGHSEGHEGNELPCLIY 463
I + K+ R+ D P I+I+ ++ +P ++Y
Sbjct: 192 KNIEKFGSDPKNRRI-----------------VSDRPPRIEII------NDQPGMPLVVY 302
Query: 464 ISREKRPAFQHHSKAGAMNALLRVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQ 523
+SRE+RP+ H K GA+NALLRVS ++SN P+VL +DC+ Y N+ ++AMCFF+D +
Sbjct: 303 VSRERRPSLPHKFKGGALNALLRVSGLISNGPYVLAVDCDMYSNDPTSAKQAMCFFLDPE 482
Query: 524 FGNSIGFVQFPLRFDSLDRNDRYANKNTVLFDINLRCQDGLQGPAYIGSACIFRRKALNG 583
I FVQFP F +L + D Y N++ F + DGL+GP GS R AL
Sbjct: 483 TSKYIAFVQFPQMFHNLSKKDIYDNQSRTAFKTMWQGMDGLRGPGLSGSGNYLSRSALLF 662
Query: 584 FDPPKASKRQREVQVHSKQDESGEDGSIKEATDEDKQLLKSHMNVENKFGNSTLFMNS-- 641
P + +D +K+A + FG ST ++ S
Sbjct: 663 GSP------------------NQKDDYLKDA--------------QKYFGKSTAYIESLK 746
Query: 642 SLTEEGGVDPSSSQEALLKEAIHVLSCRYEDRTLWGYEVGLSYGSIAADVLTSLKLHSRG 701
++ + + S++ +L+EA V SC YE+ T WG EVG SYG + +T LHSRG
Sbjct: 747 AIRGQKSSKKNISRDEMLREAQVVASCSYENNTNWGTEVGFSYGILLESTITGYLLHSRG 926
Query: 702 WRSVYCMPKRAAFRGTAPINLTERLNQVLRWAVGSLEI-LFSRHCPIWYGFKEGRLKGLQ 760
W+S Y PK F G AP ++ E + Q+++W L + + S++ P YGF R+ +
Sbjct: 927 WKSAYLYPKTPCFLGCAPTDIKEGMLQLVKWLSELLLLGVSSKYSPFTYGF--SRMSIIH 1100
Query: 761 RIAYINSTVYPFSSIPLLIYCLIPAICLLTDKFITPSVDTFASMIIISLFISIFGSAILE 820
Y T+ ++ ++Y ++P +CLL + P + +++S ++E
Sbjct: 1101TFTYCFMTMSSLYAVVFILYGIVPQVCLLKGITVFPKATDPWFAVFAFVYVSTQIQHLIE 1280
Query: 821 LRWSGVSLEEWWRSQQFWVIGSVSAHLFAVAQALMGGLAKKVNK-NFSVVSKAPDDEEFH 879
+ S+ WW Q+ W++ SV++ +FA+ + L +NK F++ +KA D E+
Sbjct: 1281VLSGDGSVAMWWDEQRIWILKSVTS-IFAIIDGIKKWLG--LNKVKFNLSNKAIDKEKLK 1451
Query: 880 ELYTIRW-----TALLVPPTTIIIINLIGVVAGFTDAINSGAHSYGALLGKLFFSLWVIA 934
+ R+ + P ++I N++ G N + + G+LF +V+
Sbjct: 1452KYEQGRFDFQGAAVFMAPLVLLLIANIVSFFVGIWRLFNFNVKDFEEMFGQLFLVTYVML 1631
Query: 935 HLYPFLKGLMGRQNRT 950
YP L+ ++ ++++
Sbjct: 1632LSYPILEAIVTMKSKS 1679
>TC215804 homologue to UP|Q6YBV2 (Q6YBV2) Cellulose synthase, partial (17%)
Length = 825
Score = 261 bits (668), Expect = 8e-70
Identities = 123/192 (64%), Positives = 158/192 (82%), Gaps = 1/192 (0%)
Frame = +1
Query: 801 FASMIIISLFISIFGSAILELRWSGVSLEEWWRSQQFWVIGSVSAHLFAVAQALMGGLAK 860
FASM I LF+SIF ++ILELRWSGVS+E+WWR++QFWVIG SAHLFAV Q L+ LA
Sbjct: 1 FASMWFILLFVSIFTTSILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAG 180
Query: 861 KVNKNFSVVSKAPDDE-EFHELYTIRWTALLVPPTTIIIINLIGVVAGFTDAINSGAHSY 919
++ NF+V SKA D++ +F ELY +WT+LL+PPTT++I+NL+G+VAG + AINSG S+
Sbjct: 181 -IDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSYAINSGYQSW 357
Query: 920 GALLGKLFFSLWVIAHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRLDPFVLKT 979
G L GKLFF++WVIAHLYPFLKGL+GRQNRTPT++++WSVLLASIFSL+WVR+DPF +
Sbjct: 358 GPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSVLLASIFSLLWVRIDPFTSDS 537
Query: 980 KGPDVKQCGISC 991
QCGI+C
Sbjct: 538 NKLTNGQCGINC 573
>TC206323 similar to UP|Q6J8X1 (Q6J8X1) Cellulose synthase, partial (18%)
Length = 976
Score = 236 bits (603), Expect = 3e-62
Identities = 108/211 (51%), Positives = 157/211 (74%)
Frame = +2
Query: 781 CLIPAICLLTDKFITPSVDTFASMIIISLFISIFGSAILELRWSGVSLEEWWRSQQFWVI 840
C + L+ F + + +AS+I ++LFISI + ILE++W GV + +WWR +QFWVI
Sbjct: 104 CTLWCFKLMLFFFFSSQISNYASIIFMALFISIAATGILEMQWGGVGIHDWWRKEQFWVI 283
Query: 841 GSVSAHLFAVAQALMGGLAKKVNKNFSVVSKAPDDEEFHELYTIRWTALLVPPTTIIIIN 900
G S+HLFA+ Q L+ LA VN NF+V SKA DD EF +LY +WT+LL+PP T++IIN
Sbjct: 284 GGASSHLFALFQGLLKVLAG-VNTNFTVTSKAADDGEFADLYIFKWTSLLIPPLTLLIIN 460
Query: 901 LIGVVAGFTDAINSGAHSYGALLGKLFFSLWVIAHLYPFLKGLMGRQNRTPTLIVIWSVL 960
+IGV+ G +DAIN+G S+G L G+LFF+LWVI HLYPFLKG+MG+Q PT+I++W++L
Sbjct: 461 IIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGVMGKQEGVPTIILVWAIL 640
Query: 961 LASIFSLVWVRLDPFVLKTKGPDVKQCGISC 991
L+SI +L+WVR++PF+ K+ ++ CG++C
Sbjct: 641 LSSILTLLWVRINPFLAKS-DVVLEICGLNC 730
>TC231157 similar to GB|CAC82909.1|25136916|ATH297948 cellulose synthase-like
protein {Arabidopsis thaliana;} , partial (23%)
Length = 932
Score = 232 bits (592), Expect = 5e-61
Identities = 112/257 (43%), Positives = 174/257 (67%), Gaps = 4/257 (1%)
Frame = +1
Query: 722 LTERLNQVLRWAVGSLEILFSRHCPIWYGFKEGRLKGLQRIAYINSTVYPFSSIPLLIYC 781
+T+RL+QVLRWA GS+EI FSR+ + R+K LQR+AY N +YPF+S+ L++YC
Sbjct: 16 VTDRLHQVLRWATGSVEIFFSRNNAL---LASPRMKFLQRVAYFNVGMYPFTSMFLIVYC 186
Query: 782 LIPAICLLTDKFITPSVDTFASMIIISLFISIFGSAILELRWSGVSLEEWWRSQQFWVIG 841
+PA+ L + +FI S+ + ++ + I++ A+LE++WSG++L +WWR++QFW+IG
Sbjct: 187 FLPAVSLFSGQFIVQSLSATFLVFLLGITITLCLLALLEIKWSGITLHDWWRNEQFWLIG 366
Query: 842 SVSAHLFAVAQALMGGLAKKVNKNFSVVSKAPD----DEEFHELYTIRWTALLVPPTTII 897
SAH AV Q L +A V+ +F++ SK+ D+EF +LY ++W+ L+VPP TI+
Sbjct: 367 GTSAHPVAVLQGL*KVIAG-VDISFTLTSKSATPEDGDDEFADLYEVKWSFLMVPPITIM 543
Query: 898 IINLIGVVAGFTDAINSGAHSYGALLGKLFFSLWVIAHLYPFLKGLMGRQNRTPTLIVIW 957
++N I + G + S + L+G +FFS WV+ HLYPF KGLMGR+ + PT+I +W
Sbjct: 544 MVNSIAIAVGVARTLYSPFPQWSRLVGGVFFSFWVLCHLYPFAKGLMGRRGKVPTIIYVW 723
Query: 958 SVLLASIFSLVWVRLDP 974
S LL+ I SL+WV ++P
Sbjct: 724 SGLLSIIISLLWVYINP 774
>BM143179 homologue to GP|6446577|gb cellulose synthase catalytic subunit
{Gossypium hirsutum}, partial (14%)
Length = 455
Score = 231 bits (588), Expect = 2e-60
Identities = 102/150 (68%), Positives = 130/150 (86%)
Frame = +3
Query: 216 YRMMVVTRLLLLLLFIQYRIFHPVPDAIGLWLISVVCEIWLTLSWIVDQLPKWFPIDRET 275
YRM+++ R +L +F+ YRI +PVP+A LWL+SV+CEIW +SWI+DQ PKW P++RET
Sbjct: 3 YRMVIMLR*FILCIFLHYRITNPVPNAYPLWLVSVICEIWFAISWILDQFPKWLPVNRET 182
Query: 276 YLDRLSIRFEPENKPNMLSPVDIFVTTVDPIKEPPLVTANTVLSILALDYPAHKISCYVS 335
YLDRL++R++ E +P+ L+ VDIFV+TVDP+KEPPLVTANTVLSILA+DYP K+SCYVS
Sbjct: 183 YLDRLALRYDQEGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVS 362
Query: 336 DDGASMLTFEALQETAEFARKWVPFCKKFS 365
DDGA+MLTFEAL ET+EFARKWVPF KK+S
Sbjct: 363 DDGAAMLTFEALAETSEFARKWVPFSKKYS 452
>TC229133 weakly similar to UP|Q944E4 (Q944E4) Cellulose synthase-like
protein OsCslE1, partial (30%)
Length = 872
Score = 223 bits (569), Expect = 2e-58
Identities = 122/286 (42%), Positives = 175/286 (60%), Gaps = 6/286 (2%)
Frame = +3
Query: 304 DPIKEPPLVTANTVLSILALDYPAHKISCYVSDDGASMLTFEALQETAEFARKWVPFCKK 363
DP EP ++ NTVLS++A DYP K+S Y+SDD AS +TF AL E + FA+ W+ FCKK
Sbjct: 6 DPGIEPAVMVMNTVLSVMAYDYPTEKLSVYLSDDAASDITFYALLEASLFAKHWLSFCKK 185
Query: 364 FSAEPRAPERYFSQKIDFLKDTLQSTYVKERRTMKREYEEFKVRINALVAKSLRVPPEGW 423
F EP +P YF T + +V E +K+ Y++ + RI AK +VP E
Sbjct: 186 FKVEPTSPAAYFKS---IASCTHPNNHVNELVPIKKLYQDMESRIEN-AAKVGQVPEEVR 353
Query: 424 T-LKDETPWPG-NNTKDHPSMIQILLGHSEGH----EGNELPCLIYISREKRPAFQHHSK 477
K + W + +DH +++QILL + +GN +P L+Y++REKRP H+ K
Sbjct: 354 PKYKGFSQWDSYTSRRDHDTILQILLHGKDSSAKDVDGNVMPILVYLAREKRPQVAHNFK 533
Query: 478 AGAMNALLRVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQFGNSIGFVQFPLRF 537
AGAMN+LLRVS+++SN +LN+DC+ Y NNS+ +R+A+CFFMD G+ I FVQ P F
Sbjct: 534 AGAMNSLLRVSSMISNGEIILNVDCDMYSNNSQSLRDALCFFMDEVKGHEIAFVQTPQCF 713
Query: 538 DSLDRNDRYANKNTVLFDINLRCQDGLQGPAYIGSACIFRRKALNG 583
+++ ND Y V++++ DGL GP YIG+ C RR+ L G
Sbjct: 714 ENVTNNDLYGGALRVIYEVEFHGLDGLGGPFYIGTGCFHRREILCG 851
>AW186367 similar to GP|23534479|g cellulose synthase {Populus tremuloides},
partial (13%)
Length = 431
Score = 214 bits (546), Expect = 1e-55
Identities = 101/139 (72%), Positives = 116/139 (82%), Gaps = 2/139 (1%)
Frame = +1
Query: 398 KREYEEFKVRINALVAKSLRVPPEGWTLKDETPWPGNNTKDHPSMIQILLGHSEG--HEG 455
+REYEEFKVRINALVAK+ +VP GW ++D TPWPGNNTKDHP MIQ+ LG S G EG
Sbjct: 10 QREYEEFKVRINALVAKAQKVPQGGWIMQDGTPWPGNNTKDHPGMIQVFLGSSGGLDTEG 189
Query: 456 NELPCLIYISREKRPAFQHHSKAGAMNALLRVSAVLSNAPFVLNLDCNHYVNNSKVVREA 515
N+LP L+Y+SREKRP FQHH KAGAMNAL+RVSAVL+NAPF+LNLDC+HYVNNSK REA
Sbjct: 190 NQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYVNNSKAAREA 369
Query: 516 MCFFMDIQFGNSIGFVQFP 534
MCF MD Q G + +VQFP
Sbjct: 370 MCFLMDPQTGKKVCYVQFP 426
>CA800297 similar to GP|4886756|gb cellulose synthase catalytic subunit
{Arabidopsis thaliana}, partial (12%)
Length = 393
Score = 213 bits (543), Expect = 3e-55
Identities = 90/131 (68%), Positives = 114/131 (86%)
Frame = +1
Query: 702 WRSVYCMPKRAAFRGTAPINLTERLNQVLRWAVGSLEILFSRHCPIWYGFKEGRLKGLQR 761
WRS+YCMPKRAAF GTAPINL++RLNQVLRWA+GS+EI FSRHCP+WYG+KEG+LK L+R
Sbjct: 1 WRSIYCMPKRAAF*GTAPINLSDRLNQVLRWALGSIEIFFSRHCPLWYGYKEGKLKWLER 180
Query: 762 IAYINSTVYPFSSIPLLIYCLIPAICLLTDKFITPSVDTFASMIIISLFISIFGSAILEL 821
AY N+TVYPF+SIPL+ YC++PA+CL +DKFI P + TFA + ++LF SI + +LEL
Sbjct: 181 FAYANTTVYPFTSIPLVAYCVLPAVCLFSDKFIMPPISTFAGLYFVALFSSIIATGLLEL 360
Query: 822 RWSGVSLEEWW 832
+WSGVS+EEWW
Sbjct: 361 KWSGVSIEEWW 393
>TC219881 homologue to UP|Q9SWW6 (Q9SWW6) Cellulose synthase catalytic
subunit (IRX3) (AT5g17420/T10B6_80), partial (13%)
Length = 589
Score = 208 bits (529), Expect = 1e-53
Identities = 95/122 (77%), Positives = 108/122 (87%)
Frame = +3
Query: 870 SKAPDDEEFHELYTIRWTALLVPPTTIIIINLIGVVAGFTDAINSGAHSYGALLGKLFFS 929
SKA DDEEF ELYT +WT LL+PPTTI+IIN++GVVAG +DAIN+G S+G L GKLFFS
Sbjct: 24 SKATDDEEFGELYTFKWTTLLIPPTTILIINIVGVVAGISDAINNGYQSWGPLFGKLFFS 203
Query: 930 LWVIAHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRLDPFVLKTKGPDVKQCGI 989
WVI HLYPFLKGLMGRQNRTPT++VIWSVLLASIFSL+WVR+DPFVLK KGPD K CGI
Sbjct: 204 FWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVLKNKGPDTKLCGI 383
Query: 990 SC 991
+C
Sbjct: 384 NC 389
>TC220504 similar to UP|Q8GUZ9 (Q8GUZ9) Cellulose synthase-like protein D4
(Fragment), partial (20%)
Length = 736
Score = 207 bits (528), Expect = 1e-53
Identities = 109/248 (43%), Positives = 156/248 (61%), Gaps = 28/248 (11%)
Frame = +1
Query: 486 RVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQFGNSIGFVQFPLRFDSLDRNDR 545
R SA++SN PF+LNLDC+HY+ NS+ +RE MCF MD + G+ + +VQFP RF+ +D NDR
Sbjct: 1 RASAIMSNGPFILNLDCDHYIYNSQALREGMCFMMD-RGGDRLCYVQFPQRFEGIDPNDR 177
Query: 546 YANKNTVLFDINLRCQDGLQGPAYIGSACIFRRKALNGFDPPK--------ASKRQREVQ 597
YAN NTV FD+N+R DG+QGP Y+G+ C+FRR AL GFDPP+ K ++
Sbjct: 178 YANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPRIKEESGWFGRKNKKSST 357
Query: 598 VHSKQDESGEDGSIKEATDEDKQLLKSHMNVENKFGNSTLFMNS-SLTEEGGV---DPSS 653
V S + S E+ S++ ED+++ + V KFGNS+L ++S + E G+ D SS
Sbjct: 358 VASVSEASAEEQSLRNGRIEDEEMTSA--LVPKKFGNSSLLVDSVRVAEFQGLPLADHSS 531
Query: 654 SQ----------------EALLKEAIHVLSCRYEDRTLWGYEVGLSYGSIAADVLTSLKL 697
+ A + EAI+V+SC YED+T WG VG YGS+ DV+T ++
Sbjct: 532 IKYGRPPGALTLPRDPLDAATVAEAINVISCWYEDKTEWGLRVGWIYGSVTEDVVTGYRM 711
Query: 698 HSRGWRSV 705
H+RGW+S+
Sbjct: 712 HNRGWKSI 735
>AI438079 similar to GP|27462651|g cellulose synthase {Arabidopsis thaliana},
partial (11%)
Length = 374
Score = 207 bits (528), Expect = 1e-53
Identities = 92/123 (74%), Positives = 109/123 (87%)
Frame = +2
Query: 250 VVCEIWLTLSWIVDQLPKWFPIDRETYLDRLSIRFEPENKPNMLSPVDIFVTTVDPIKEP 309
V+CEIW LSWI+DQ PKWFPI RETYLDRLS+RFE E + N L+PVD FV+TVDP+KEP
Sbjct: 2 VICEIWFALSWILDQFPKWFPITRETYLDRLSLRFEREGETNELAPVDFFVSTVDPLKEP 181
Query: 310 PLVTANTVLSILALDYPAHKISCYVSDDGASMLTFEALQETAEFARKWVPFCKKFSAEPR 369
P++TANTVLSIL++DYP K+SCYVSDDGASML F++L ETAEFAR+WVPFCKK++ EPR
Sbjct: 182 PIITANTVLSILSVDYPVDKVSCYVSDDGASMLLFDSLAETAEFARRWVPFCKKYNIEPR 361
Query: 370 APE 372
APE
Sbjct: 362 APE 370
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.321 0.138 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,670,453
Number of Sequences: 63676
Number of extensions: 749554
Number of successful extensions: 4315
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 4094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4211
length of query: 991
length of database: 12,639,632
effective HSP length: 106
effective length of query: 885
effective length of database: 5,889,976
effective search space: 5212628760
effective search space used: 5212628760
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0037a.5