BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0031.13
(927 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC226553 similar to UP|Q9SDG8 (Q9SDG8) ESTs AU068544(C30430), pa... 858 0.0
TC226554 similar to UP|Q9SDG8 (Q9SDG8) ESTs AU068544(C30430), pa... 430 e-120
TC215467 similar to UP|AGO1_ARATH (O04379) Argonaute protein, pa... 338 8e-93
TC226555 similar to GB|AAC77862.2|20197419|AC005623 Argonaute (A... 327 2e-89
TC219116 homologue to UP|PINH_ARATH (Q9XGW1) PINHEAD protein (ZW... 280 2e-75
TC231752 similar to UP|Q9SDG8 (Q9SDG8) ESTs AU068544(C30430), pa... 277 1e-74
TC212656 similar to GB|AAC77862.2|20197419|AC005623 Argonaute (A... 274 1e-73
AW755942 similar to GP|20197419|gb Argonaute (AGO1)-like protein... 263 3e-70
BU548100 228 9e-60
BU964667 weakly similar to GP|20197419|gb| Argonaute (AGO1)-like... 201 2e-51
BM108030 187 2e-47
TC229952 homologue to UP|Q8LP00 (Q8LP00) ZLL/PNH homologous prot... 181 1e-45
AW756252 weakly similar to PIR|T01113|T01 translation initiation... 167 2e-41
TC229953 similar to UP|Q8LP00 (Q8LP00) ZLL/PNH homologous protei... 141 1e-33
CO979360 136 4e-32
TC211731 similar to UP|Q9SHF2 (Q9SHF2) T19E23.8, partial (13%) 127 2e-29
TC215466 homologue to UP|AGO1_ARATH (O04379) Argonaute protein, ... 121 1e-27
AW598635 similar to SP|Q9SJK3|AGOL Argonaute-like protein At2g27... 109 5e-24
BM309593 107 2e-23
TC220730 homologue to UP|Q8LP00 (Q8LP00) ZLL/PNH homologous prot... 107 3e-23
>TC226553 similar to UP|Q9SDG8 (Q9SDG8) ESTs AU068544(C30430), partial (54%)
Length = 1899
Score = 858 bits (2217), Expect = 0.0
Identities = 408/503 (81%), Positives = 463/503 (91%)
Frame = +3
Query: 425 LVEKSRQKPLERMNVLNQALKTSNYGNEPMLKNCGITIASGFTQVEGRVLQAPRLKFGNG 484
LVEKSRQKP ERM +L+ AL+TSNYG EPML+NCGI+I++GFT+VEGRVL APRLKFGNG
Sbjct: 3 LVEKSRQKPQERMKILSDALRTSNYGAEPMLRNCGISISTGFTEVEGRVLPAPRLKFGNG 182
Query: 485 EDFNPRNGRWNLNNKKVVRPAKIEHWAVVNFSARCDVRGLVRDLIKCARLKGIPIDEPYE 544
ED NPRNGRWN++ K V P+KIE WAV NFSARCDVRGLVRDLI+ +KGI I++P++
Sbjct: 183 EDLNPRNGRWNVSRVKFVEPSKIERWAVANFSARCDVRGLVRDLIRIGDMKGITIEQPFD 362
Query: 545 EIFEENGQFRRAPPLVRVEKMFERIQKELPGAPSFLLCLLPERKNSDLYGPWKKKNLAEY 604
+F+EN QFRRAPP+VRVEKMFE IQ +LPGAP FLLCLLP+RKN D+YGPWKKKNLA++
Sbjct: 363 -VFDENPQFRRAPPMVRVEKMFEHIQSKLPGAPQFLLCLLPDRKNCDIYGPWKKKNLADF 539
Query: 605 GIVTQCISPTRVNDQYLTNVLMKINAKLGGLNSVLGVEMNPSIPIVSKVPTIILGMDVSH 664
GI+ QC+ P RVNDQYLTNV++KINAKLGGLNS+LGVE +PS+P+VSK PT+ILGMDVSH
Sbjct: 540 GIINQCMCPLRVNDQYLTNVMLKINAKLGGLNSLLGVEHSPSLPVVSKAPTLILGMDVSH 719
Query: 665 GSPGQSDIPSIAAVVSSREWPLISKYRACVRTQSPKVEMIDNLFKQVSEKEDEGIIRELL 724
GSPGQ+DIPSIAAVVSSR WPLISKYRACVRTQS K+EMIDNLFK VSEKEDEGIIRELL
Sbjct: 720 GSPGQTDIPSIAAVVSSRHWPLISKYRACVRTQSAKMEMIDNLFKLVSEKEDEGIIRELL 899
Query: 725 IDFYSSSGKRKPDNIIIFRDGVSESQFNQVLNIELNQIIEACKFLDETWNPKFLVIVAQK 784
+DFY++SG+RKP+NIIIFRDGVSESQFNQVLNIEL++IIEACKFLDE W PKF+VIVAQK
Sbjct: 900 LDFYTTSGRRKPENIIIFRDGVSESQFNQVLNIELDRIIEACKFLDENWEPKFVVIVAQK 1079
Query: 785 NHHTKFFQPGSPDNVPPGTVIDNKICHPRNNDFYMCAHAGMIGTSRPTHYHVLLDDIGFS 844
NHHT+FFQPGSPDNVPPGTVIDNKICHPRN DFY+CAHAGMIGTSRPTHYHVLLD +GFS
Sbjct: 1080NHHTRFFQPGSPDNVPPGTVIDNKICHPRNYDFYLCAHAGMIGTSRPTHYHVLLDQVGFS 1259
Query: 845 PDELQELVHSLSYVYQRSTTAISVVAPICYAHLAATQIGQFMKFEDKSDTSSSHGGLTAA 904
PD+LQELVHSLSYVYQRSTTAISVVAPICYAHLAATQ+GQFMKFEDKS+TSSSHGGL+ A
Sbjct: 1260PDQLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETSSSHGGLSGA 1439
Query: 905 GVAPVVPQLPKLQDSVSSSMFFC 927
G P VPQLP LQ++V ++MFFC
Sbjct: 1440GAVP-VPQLPPLQENVRNTMFFC 1505
>TC226554 similar to UP|Q9SDG8 (Q9SDG8) ESTs AU068544(C30430), partial (25%)
Length = 944
Score = 430 bits (1105), Expect = e-120
Identities = 209/233 (89%), Positives = 224/233 (95%), Gaps = 1/233 (0%)
Frame = +3
Query: 696 TQSPKVEMIDNLFKQVSEKEDEGIIRELLIDFYSSSGKRKPDNIIIFRDGVSESQFNQVL 755
TQSPK+EMIDNLFK+VS+KEDEGI+RELL+DFY+SSG RKPDNIIIFRDGVSESQFNQVL
Sbjct: 3 TQSPKMEMIDNLFKKVSDKEDEGIMRELLLDFYTSSGNRKPDNIIIFRDGVSESQFNQVL 182
Query: 756 NIELNQIIEACKFLDETWNPKFLVIVAQKNHHTKFFQPGSPDNVPPGTVIDNKICHPRNN 815
NIEL+QIIEACKFLDE WNPKFLVIVAQKNHHTKFFQPG+PDNVPPGTVIDNKICHPRN
Sbjct: 183 NIELDQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGAPDNVPPGTVIDNKICHPRNY 362
Query: 816 DFYMCAHAGMIGTSRPTHYHVLLDDIGFSPDELQELVHSLSYVYQRSTTAISVVAPICYA 875
DFYMCAHAGMIGTSRPTHYHVLLD+IGFSPD+LQELVHSLSYVYQRSTTAISVVAPICYA
Sbjct: 363 DFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYA 542
Query: 876 HLAATQIGQFMKFEDKSDTSSSHGGLTAAGV-APVVPQLPKLQDSVSSSMFFC 927
HLAATQ+GQFMKFEDKS+TSSSHGG +G+ AP VPQLP+LQD VSSSMFFC
Sbjct: 543 HLAATQMGQFMKFEDKSETSSSHGG---SGIPAPPVPQLPRLQDKVSSSMFFC 692
>TC215467 similar to UP|AGO1_ARATH (O04379) Argonaute protein, partial (51%)
Length = 1966
Score = 338 bits (866), Expect = 8e-93
Identities = 209/549 (38%), Positives = 296/549 (53%), Gaps = 42/549 (7%)
Frame = +2
Query: 421 QRSSLVEKSRQKPLERMNVLNQALKTSNYGNEPMLKNCGITIASGFTQVEGRVLQAPRLK 480
Q ++L+ + Q+P ER + Q + + Y +P K GI I+ QVE R+L AP LK
Sbjct: 8 QITNLLRVTCQRPGERERDIMQTVHHNAYHEDPYAKEFGIKISEKLAQVEARILPAPWLK 187
Query: 481 F---GNGEDFNPRNGRWNLNNKKVVRPAKIEHWAVVNFSARCD---VRGLVRDLIKCARL 534
+ G +D P+ G+WN+ NKK+V + +W +NFS RG +L + +
Sbjct: 188 YHDTGREKDCLPQVGQWNMMNKKMVNGGTVNNWFCINFSRNVQDSVARGFCYELAQMCYI 367
Query: 535 KGIPID-EPYEEIFEENGQFRRAPPLVRVEKMFERIQK--------ELPGAPSFLLCLLP 585
G+ EP PP+ E++ K +L G LL ++
Sbjct: 368 SGMAFTPEPV------------VPPVSARPDQVEKVLKTRYHDAKNKLQGKELDLLIVIL 511
Query: 586 ERKNSDLYGPWKKKNLAEYGIVTQCISPTRV---NDQYLTNVLMKINAKLGGLNSVLGVE 642
N LYG K+ + G+V+QC V + QYL NV +KIN K+GG N+VL
Sbjct: 512 PDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDA 691
Query: 643 MNPSIPIVSKVPTIILGMDVSHGSPGQSDIPSIAAVVSSREWPLISKYRACVRTQSPKVE 702
++ IP+VS PTII G DV+H PG+ PSIAAVV+S+++P I+KY V Q+ + E
Sbjct: 692 LSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDYPEITKYAGLVCAQAHRQE 871
Query: 703 MIDNLFKQ----VSEKEDEGIIRELLIDFYSSSGKRKPDNIIIFRDGVSESQFNQVLNIE 758
+I +LFKQ V G+I+ELLI F ++G+ KP II +RDGVSE QF QVL E
Sbjct: 872 LIQDLFKQWQDPVRGTVTGGMIKELLISFRRATGQ-KPQRIIFYRDGVSEGQFYQVLLFE 1048
Query: 759 LNQIIEACKFLDETWNPKFLVIVAQKNHHTKFFQPGSPD--------NVPPGTVIDNKIC 810
L+ I +AC L+ + P +V QK HHT+ F D N+ PGTV+D+KIC
Sbjct: 1049LDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHHDKSSVDKSGNILPGTVVDSKIC 1228
Query: 811 HPRNNDFYMCAHAGMIGTSRPTHYHVLLDDIGFSPDELQELVHSLSYVYQRSTTAISVVA 870
HP DFY+C+HAG+ GTSRP HYHVL D+ F+ D LQ L ++L Y Y R T ++S+V
Sbjct: 1229HPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVP 1408
Query: 871 PICYAHLAATQIGQFMKFEDKSDTSSSHGGLTAAGVAPV------------VPQLPKLQD 918
P YAHLAA + +M+ E S + G + G+ V V LP L++
Sbjct: 1409PAYYAHLAAFRARFYMEPETSDSGSMTSGAVAGRGMGGVGRSTRVPGANAAVRPLPALKE 1588
Query: 919 SVSSSMFFC 927
+V MF+C
Sbjct: 1589NVKRVMFYC 1615
>TC226555 similar to GB|AAC77862.2|20197419|AC005623 Argonaute (AGO1)-like
protein {Arabidopsis thaliana;} , partial (17%)
Length = 899
Score = 327 bits (837), Expect = 2e-89
Identities = 159/181 (87%), Positives = 169/181 (92%)
Frame = +1
Query: 747 SESQFNQVLNIELNQIIEACKFLDETWNPKFLVIVAQKNHHTKFFQPGSPDNVPPGTVID 806
SESQFNQVLNI +QIIEACKFLDE PKFLVIVAQKNHHTKFFQPG+PDNVPPGTVID
Sbjct: 1 SESQFNQVLNIXXDQIIEACKFLDEKXXPKFLVIVAQKNHHTKFFQPGAPDNVPPGTVID 180
Query: 807 NKICHPRNNDFYMCAHAGMIGTSRPTHYHVLLDDIGFSPDELQELVHSLSYVYQRSTTAI 866
NKICHPRN DFYMCAHAGMIGTSRPTHYHVLLD+IGFSPD+LQELVHSLSYVYQRSTTAI
Sbjct: 181 NKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAI 360
Query: 867 SVVAPICYAHLAATQIGQFMKFEDKSDTSSSHGGLTAAGVAPVVPQLPKLQDSVSSSMFF 926
SVVAPICYAHLAATQ+GQFMKFEDKS+TSSSHGG + AP VPQLP+LQ++VSSSMFF
Sbjct: 361 SVVAPICYAHLAATQMGQFMKFEDKSETSSSHGG--SGMPAPPVPQLPRLQENVSSSMFF 534
Query: 927 C 927
C
Sbjct: 535 C 537
>TC219116 homologue to UP|PINH_ARATH (Q9XGW1) PINHEAD protein (ZWILLE
protein), partial (40%)
Length = 1551
Score = 280 bits (716), Expect = 2e-75
Identities = 160/369 (43%), Positives = 222/369 (59%), Gaps = 21/369 (5%)
Frame = +3
Query: 580 LLCLLPERKNSDLYGPWKKKNLAEYGIVTQCISPT---RVNDQYLTNVLMKINAKLGGLN 636
LL +LP+ N LYG K+ + G+++QC ++ QYL NV +KIN K+GG N
Sbjct: 144 LLAILPDN-NGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRN 320
Query: 637 SVLGVEMNPSIPIVSKVPTIILGMDVSHGSPGQSDIPSIAAVVSSREWPLISKYRACVRT 696
+VL ++ IP+VS +PTII G DV+H G+ PSIAAVV+S++WP ++KY V
Sbjct: 321 TVLLDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCA 500
Query: 697 QSPKVEMIDNLFKQ----VSEKEDEGIIRELLIDFYSSSGKRKPDNIIIFRDGVSESQFN 752
Q+ + E+I +L+K V G+IR+LL+ F ++G+ KP II +RDGVSE QF
Sbjct: 501 QAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLVSFRKATGQ-KPLRIIFYRDGVSEGQFY 677
Query: 753 QVLNIELNQIIEACKFLDETWNPKFLVIVAQKNHHTKFFQPGSPD--------NVPPGTV 804
QVL EL+ I +AC L+ + P IV QK HHT+ F D N+ PGTV
Sbjct: 678 QVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNYRDRSSTDRSGNILPGTV 857
Query: 805 IDNKICHPRNNDFYMCAHAGMIGTSRPTHYHVLLDDIGFSPDELQELVHSLSYVYQRSTT 864
+D KICHP DFY+C HAG+ GTSRP HYHVL D+ F+PD +Q L ++L Y Y R T
Sbjct: 858 VDTKICHPTEFDFYLCNHAGIQGTSRPAHYHVLWDENNFTPDGIQSLTNNLCYTYARCTR 1037
Query: 865 AISVVAPICYAHLAATQIGQFMKFEDKSDTSSSHG------GLTAAGVAPVVPQLPKLQD 918
++SVV P YAHLAA + +M+ + + + S+ G AAG V P LP L++
Sbjct: 1038SVSVVPPAYYAHLAAFRARFYMEPDMQDNGSAGDGNGHGAKATRAAGDYSVKP-LPDLKE 1214
Query: 919 SVSSSMFFC 927
+V MF+C
Sbjct: 1215NVKRVMFYC 1241
>TC231752 similar to UP|Q9SDG8 (Q9SDG8) ESTs AU068544(C30430), partial (17%)
Length = 476
Score = 277 bits (709), Expect = 1e-74
Identities = 132/159 (83%), Positives = 147/159 (92%)
Frame = +2
Query: 504 PAKIEHWAVVNFSARCDVRGLVRDLIKCARLKGIPIDEPYEEIFEENGQFRRAPPLVRVE 563
P KIE WAVVNFSARCD RGLVRDLIKC +KGI ID+P++ +FEENGQFRRAPP+VRVE
Sbjct: 2 PTKIERWAVVNFSARCDTRGLVRDLIKCGGMKGIVIDQPFD-VFEENGQFRRAPPVVRVE 178
Query: 564 KMFERIQKELPGAPSFLLCLLPERKNSDLYGPWKKKNLAEYGIVTQCISPTRVNDQYLTN 623
KMFE +Q +LPGAP FLLCLLPERKNSDLYGPWKKKNLAE+GIVTQCI+PTRVNDQYLTN
Sbjct: 179 KMFELVQSKLPGAPQFLLCLLPERKNSDLYGPWKKKNLAEFGIVTQCIAPTRVNDQYLTN 358
Query: 624 VLMKINAKLGGLNSVLGVEMNPSIPIVSKVPTIILGMDV 662
VL+KINAKLGGLNS+LGVE +PSIPIVS+ PTII+GMDV
Sbjct: 359 VLLKINAKLGGLNSILGVEHSPSIPIVSRAPTIIIGMDV 475
>TC212656 similar to GB|AAC77862.2|20197419|AC005623 Argonaute (AGO1)-like
protein {Arabidopsis thaliana;} , partial (14%)
Length = 465
Score = 274 bits (701), Expect = 1e-73
Identities = 134/157 (85%), Positives = 144/157 (91%)
Frame = +1
Query: 224 LDIILRQHAAKQGCLLVRQSFFHNDPKNYADVGGGVLGCRGFHSSFRTTQSGLSLNIDVS 283
LDIILRQHAA QGCLLVRQSFFHN+P N+ADVGGGVLGCRGFHSSFRTTQSGLSLNIDVS
Sbjct: 1 LDIILRQHAANQGCLLVRQSFFHNNPNNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVS 180
Query: 284 TTMIIQPGPVVDFLIANQNVRDPFSLDWAKAKRTLKNLRIKASPSNQEYKITGLSELPCK 343
TTMII PGPVVDFLI+NQNVRDPF LDWAKAKRTLKNLRIK SPSNQE+KI+GLSELPC+
Sbjct: 181 TTMIISPGPVVDFLISNQNVRDPFQLDWAKAKRTLKNLRIKTSPSNQEFKISGLSELPCR 360
Query: 344 EQTFTMKKKGGNNGEEDATEEEITVYEYFVNYRKIDL 380
EQTFT+K KGG +GE+ EEITVY+YFV RKIDL
Sbjct: 361 EQTFTLKGKGGGDGEDG--NEEITVYDYFVKVRKIDL 465
>AW755942 similar to GP|20197419|gb Argonaute (AGO1)-like protein
{Arabidopsis thaliana}, partial (14%)
Length = 438
Score = 263 bits (671), Expect = 3e-70
Identities = 129/149 (86%), Positives = 140/149 (93%)
Frame = +2
Query: 279 NIDVSTTMIIQPGPVVDFLIANQNVRDPFSLDWAKAKRTLKNLRIKASPSNQEYKITGLS 338
NIDVSTTMII PGPVVDFLI+NQNVRDPFSLDWAKAKRTLKNLRIK+SPSNQE+KITGLS
Sbjct: 2 NIDVSTTMIITPGPVVDFLISNQNVRDPFSLDWAKAKRTLKNLRIKSSPSNQEFKITGLS 181
Query: 339 ELPCKEQTFTMKKKGGNNGEEDATEEEITVYEYFVNYRKIDLRYSADLPCINVGKPKRPT 398
ELPCK+Q FT+KKKGG +D TEEE+TVY+YFVN RKIDLRYS DLPCINVGKPKRPT
Sbjct: 182 ELPCKDQMFTLKKKGG----DDDTEEEVTVYDYFVNIRKIDLRYSGDLPCINVGKPKRPT 349
Query: 399 YVPVELCSLVSLQRYTKALTTLQRSSLVE 427
Y+P+ELCSLVSLQRYTKAL+TLQRSSLVE
Sbjct: 350 YIPLELCSLVSLQRYTKALSTLQRSSLVE 436
>BU548100
Length = 650
Score = 228 bits (581), Expect = 9e-60
Identities = 115/178 (64%), Positives = 132/178 (73%), Gaps = 3/178 (1%)
Frame = -1
Query: 753 QVLNIELNQIIEACKFLDETWNPKFLVIVAQKNHHTKFFQPGSPDNVPPGTVIDNKICHP 812
QVL IELNQII+A + L E P+F VIVAQK HH K F P P+NVPPGTV+D I HP
Sbjct: 647 QVLTIELNQIIKAYQHLGEVNVPQFTVIVAQKKHHIKLFLPNGPENVPPGTVVDTTITHP 468
Query: 813 RNNDFYMCAHAGMIGTSRPTHYHVLLDDIGFSPDELQELVHSLSYVYQRSTTAISVVAPI 872
RN DFYMCAHAGM+GTSRP HYHVLLD+IGFS D LQ L+HSLSYV QRST A SVVAPI
Sbjct: 467 RNYDFYMCAHAGMLGTSRPVHYHVLLDEIGFSADGLQNLIHSLSYVNQRSTIATSVVAPI 288
Query: 873 CYAHLAATQIGQFMKFEDKSDTSS---SHGGLTAAGVAPVVPQLPKLQDSVSSSMFFC 927
CYAH AA Q+GQ + F+D S+T S S GG+ +P+LP+L +V SSMFFC
Sbjct: 287 CYAHHAAAQMGQLLNFDDSSETGSSPASEGGIP-------IPELPRLHRNVRSSMFFC 135
>BU964667 weakly similar to GP|20197419|gb| Argonaute (AGO1)-like protein
{Arabidopsis thaliana}, partial (10%)
Length = 444
Score = 201 bits (510), Expect = 2e-51
Identities = 101/139 (72%), Positives = 115/139 (82%)
Frame = +1
Query: 12 NGNGNEDLMPPPPPPPIVPADVEPVKVDLLDLPPEPVKKKLPTRLPIARKGLGSKGTKLP 71
NG NED +PPPPP +VP+DV PVK EP KKK +R PIAR+GL SKGTKL
Sbjct: 58 NGTENEDSLPPPPP--VVPSDVVPVKA-------EPEKKKA-SRFPIARRGLASKGTKLQ 207
Query: 72 LLTNHFKVTVANSDGHFFQYSVALSYEDGRPVEGKGVGRKVIDKVQETYGSELNGKDFAY 131
LLTNH++V VAN+DGHF+QYSVAL Y+DGRPVEGKGVGRK++D+V ETY SELNGKDFAY
Sbjct: 208 LLTNHYRVNVANTDGHFYQYSVALFYDDGRPVEGKGVGRKLLDRVHETYDSELNGKDFAY 387
Query: 132 DGEKTLFTIGSLARNKLEF 150
DGEKTLFT+GSLARNKLEF
Sbjct: 388 DGEKTLFTLGSLARNKLEF 444
>BM108030
Length = 566
Score = 187 bits (475), Expect = 2e-47
Identities = 97/132 (73%), Positives = 108/132 (81%), Gaps = 1/132 (0%)
Frame = +2
Query: 152 VVLEDVISNRNNGNCSPDGASTNDSDKKRMRRPYHSKTFKVEISFAAKIPLQAIVNALRG 211
VVLEDV SNRNNGNCSPDG N+SD+KRMRRPY SK+FKVEISFAAKIP+QAI +ALRG
Sbjct: 5 VVLEDVTSNRNNGNCSPDGLGDNESDRKRMRRPYRSKSFKVEISFAAKIPMQAIASALRG 184
Query: 212 QESENYQEAIRVLDIILRQHAAKQGCLLVRQSFFHNDPKNYADVGGGVLGCRGFH-SSFR 270
QE+EN+QEAIRVLDIILRQHAAKQGCLLVRQSFFHN+P N+ADV +
Sbjct: 185 QETENFQEAIRVLDIILRQHAAKQGCLLVRQSFFHNNPNNFADVRXWCPRL*XIPLQALE 364
Query: 271 TTQSGLSLNIDV 282
+SGLSLNIDV
Sbjct: 365 LHRSGLSLNIDV 400
Score = 51.6 bits (122), Expect = 2e-06
Identities = 33/77 (42%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 255 VGGGVLGCRGFHSSF-RTTQSGLSLNIDVSTTMIIQPGPV--VDFLIANQNVRDPFSLDW 311
+G GVLGCR FHS T+ L ST I P + + ++ PF LDW
Sbjct: 315 LGXGVLGCRXFHSKL*NYTEVACLLT*MFSTYXDISPWACXWISLISQSKXXXFPFPLDW 494
Query: 312 AKAKRTLKNLRIKASPS 328
AKAKRT KNL+I PS
Sbjct: 495 AKAKRTPKNLKI*TXPS 545
>TC229952 homologue to UP|Q8LP00 (Q8LP00) ZLL/PNH homologous protein, partial
(20%)
Length = 913
Score = 181 bits (459), Expect = 1e-45
Identities = 99/215 (46%), Positives = 134/215 (62%), Gaps = 8/215 (3%)
Frame = +2
Query: 721 RELLIDFYSSSGKRKPDNIIIFRDGVSESQFNQVLNIELNQIIEACKFLDETWNPKFLVI 780
RELL+ F ++G+ KP II +RDGVSE QF QVL EL+ I +AC L+ ++ P +
Sbjct: 65 RELLLSFKKATGQ-KPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFV 241
Query: 781 VAQKNHHTKFFQPGSPD--------NVPPGTVIDNKICHPRNNDFYMCAHAGMIGTSRPT 832
V QK HHT+ F D N+ PGTV+D+KICHP DFY+C+HAG+ GTSRP
Sbjct: 242 VVQKRHHTRLFANNHDDRNSTDKSGNILPGTVVDSKICHPSEFDFYLCSHAGIQGTSRPA 421
Query: 833 HYHVLLDDIGFSPDELQELVHSLSYVYQRSTTAISVVAPICYAHLAATQIGQFMKFEDKS 892
HYHVL D+ F+ DE+Q L ++L Y Y R T ++SVV P YAHLAA + +M+ D +
Sbjct: 422 HYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYME-PDVA 598
Query: 893 DTSSSHGGLTAAGVAPVVPQLPKLQDSVSSSMFFC 927
+ + G T PV P LP L++ V + MF+C
Sbjct: 599 EITKLRG--TRLKEGPVRP-LPALKEKVKNVMFYC 694
>AW756252 weakly similar to PIR|T01113|T01 translation initiation factor
eIF-2C homolog T21L14.12 - Arabidopsis thaliana, partial
(14%)
Length = 435
Score = 167 bits (424), Expect = 2e-41
Identities = 76/145 (52%), Positives = 105/145 (72%)
Frame = +1
Query: 485 EDFNPRNGRWNLNNKKVVRPAKIEHWAVVNFSARCDVRGLVRDLIKCARLKGIPIDEPYE 544
+D P NGRWN N K +++ + I++WAVVNFSA CD + R+LI+C KGI I+ PY
Sbjct: 4 DDCIPHNGRWNFNKKTLLQASHIDYWAVVNFSASCDTSYISRELIRCGMSKGINIERPYT 183
Query: 545 EIFEENGQFRRAPPLVRVEKMFERIQKELPGAPSFLLCLLPERKNSDLYGPWKKKNLAEY 604
+ EE Q R++ P+ RVE+MF+ + +L P +LC+LPERK D+YGPWKKK L+E
Sbjct: 184 -LIEEEPQLRKSHPVARVERMFDLLASKLNREPKLILCVLPERKICDIYGPWKKKCLSEI 360
Query: 605 GIVTQCISPTRVNDQYLTNVLMKIN 629
G+VTQCI+P ++ +QYLTNVL+KIN
Sbjct: 361 GVVTQCIAPVKITNQYLTNVLLKIN 435
>TC229953 similar to UP|Q8LP00 (Q8LP00) ZLL/PNH homologous protein, partial
(18%)
Length = 537
Score = 141 bits (356), Expect = 1e-33
Identities = 78/174 (44%), Positives = 108/174 (61%), Gaps = 4/174 (2%)
Frame = +3
Query: 628 INAKLGGLNSVLGVEMNPSIPIVSKVPTIILGMDVSHGSPGQSDIPSIAAVVSSREWPLI 687
IN K+GG N+VL ++ IP+VS +PTII G DV+H G+ PSIAAVV+S++WP +
Sbjct: 3 INVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDPCPSIAAVVASQDWPEV 182
Query: 688 SKYRACVRTQSPKVEMIDNLFKQVSEKED----EGIIRELLIDFYSSSGKRKPDNIIIFR 743
+KY V Q + E+I +LFK + G+IRELL+ F ++G +KP II +R
Sbjct: 183 TKYAGLVCAQPHREELIQDLFKCWKDPHHGIVYGGMIRELLLSFKKATG-QKPLRIIFYR 359
Query: 744 DGVSESQFNQVLNIELNQIIEACKFLDETWNPKFLVIVAQKNHHTKFFQPGSPD 797
DGVSE QF QVL EL+ I +AC L+ ++ P +V QK HHT+ F D
Sbjct: 360 DGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSNNHDD 521
>CO979360
Length = 753
Score = 136 bits (343), Expect = 4e-32
Identities = 79/190 (41%), Positives = 106/190 (55%), Gaps = 12/190 (6%)
Frame = -1
Query: 750 QFNQVLNIELNQIIEACKFLDETWNPKFLVIVAQKNHHTKFFQPGSPD------------ 797
QF +VL EL I AC + P V QK HHT+ F P D
Sbjct: 753 QFYKVLEEELQSIRCACSRFPG-YKPTITFAVVQKRHHTRLF-PFETDQSSTQKNNFLYE 580
Query: 798 NVPPGTVIDNKICHPRNNDFYMCAHAGMIGTSRPTHYHVLLDDIGFSPDELQELVHSLSY 857
N+PPGTV+D+ I HP+ DFY+C+H G+ GTSRPTHYHVL D+ F+ DELQ+LV++L Y
Sbjct: 579 NIPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPTHYHVLWDENQFTSDELQKLVYNLCY 400
Query: 858 VYQRSTTAISVVAPICYAHLAATQIGQFMKFEDKSDTSSSHGGLTAAGVAPVVPQLPKLQ 917
+ R T IS+V P YAHLAA + +++ + S L+ A P LPKL
Sbjct: 399 TFVRCTKPISLVPPAYYAHLAAYRGRLYLERSESLGLFRSTSTLSRAAPPKTAP-LPKLS 223
Query: 918 DSVSSSMFFC 927
+++ MF+C
Sbjct: 222 ENIKKLMFYC 193
>TC211731 similar to UP|Q9SHF2 (Q9SHF2) T19E23.8, partial (13%)
Length = 594
Score = 127 bits (319), Expect = 2e-29
Identities = 82/204 (40%), Positives = 110/204 (53%), Gaps = 4/204 (1%)
Frame = +3
Query: 605 GIVTQCISPTRVN---DQYLTNVLMKINAKLGGLNSVLGVEMNPSIP-IVSKVPTIILGM 660
GIVTQC N DQYLTN+ +KINAK+GG N VE+ +P + + +G
Sbjct: 30 GIVTQCCLSGIANEGKDQYLTNLALKINAKIGGSN----VELINRLPHFEGEGHVMFIGA 197
Query: 661 DVSHGSPGQSDIPSIAAVVSSREWPLISKYRACVRTQSPKVEMIDNLFKQVSEKEDEGII 720
DV+H + + PSIAAVV++ WP ++Y A V Q +VE I N G I
Sbjct: 198 DVNHPASRDINSPSIAAVVATVNWPAANRYAARVCAQGHRVEKILNF----------GRI 347
Query: 721 RELLIDFYSSSGKRKPDNIIIFRDGVSESQFNQVLNIELNQIIEACKFLDETWNPKFLVI 780
L+ +Y K +P+ I++FRDGVSESQF+ VL EL + F D + P +I
Sbjct: 348 CYELVSYYDRLNKVRPEKIVVFRDGVSESQFHMVLTEELQDLKSV--FSDANYFPTITII 521
Query: 781 VAQKNHHTKFFQPGSPDNVPPGTV 804
VAQK H T+FF G D + G V
Sbjct: 522 VAQKRHQTRFFPVGPKDGIQNGNV 593
>TC215466 homologue to UP|AGO1_ARATH (O04379) Argonaute protein, partial
(14%)
Length = 775
Score = 121 bits (304), Expect = 1e-27
Identities = 62/147 (42%), Positives = 84/147 (56%), Gaps = 17/147 (11%)
Frame = +1
Query: 798 NVPPGTVIDNKICHPRNNDFYMCAHAGMIGTSRPTHYHVLLDDIGFSPDELQELVHSLSY 857
N+ PGTV+D+KICHP DFY+C+HAG+ GTSRP HYHVL D+ F+ D LQ L ++L Y
Sbjct: 19 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCY 198
Query: 858 VYQRSTTAISVVAPICYAHLAATQIGQFMKFEDKSDTSSSHGGLT--------------- 902
Y R T ++S+V P YAHLAA + +M+ E S + G +
Sbjct: 199 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGAVAGRGMGGGGGGGVGRS 378
Query: 903 --AAGVAPVVPQLPKLQDSVSSSMFFC 927
A G V LP L+++V MF+C
Sbjct: 379 TRAPGANAAVRPLPALKENVKRVMFYC 459
Score = 26.6 bits (57), Expect(2) = 4.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 21 PPPPPPPIVPADVEPVKVDLL 41
PPPPPPPI P+ ++ L
Sbjct: 365 PPPPPPPIPRPATAPLVIEPL 303
Score = 21.9 bits (45), Expect(2) = 4.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 15 GNEDLMPPPPPPP 27
G L P PPPPP
Sbjct: 389 GARVLRPTPPPPP 351
>AW598635 similar to SP|Q9SJK3|AGOL Argonaute-like protein At2g27880.
[Mouse-ear cress] {Arabidopsis thaliana}, partial (10%)
Length = 320
Score = 109 bits (273), Expect = 5e-24
Identities = 55/106 (51%), Positives = 70/106 (65%), Gaps = 8/106 (7%)
Frame = +3
Query: 746 VSESQFNQVLNIELNQIIEACKFLDETWNPKFLVIVAQKNHHTKFF--QPGSPD------ 797
VSE QF+QVL E++ I AC L E + P+ +V QK HHT+ F + GS D
Sbjct: 3 VSEGQFSQVLLYEMDAIRRACASLQEDYMPRVTFVVVQKRHHTRLFPAEHGSRDQTDKSG 182
Query: 798 NVPPGTVIDNKICHPRNNDFYMCAHAGMIGTSRPTHYHVLLDDIGF 843
N+ PGTV+D +ICHPR DFY+ +HAG+ GTSRPTHYHVL D+ F
Sbjct: 183 NILPGTVVDTQICHPREFDFYLNSHAGIQGTSRPTHYHVLFDENNF 320
>BM309593
Length = 188
Score = 107 bits (267), Expect = 2e-23
Identities = 51/62 (82%), Positives = 58/62 (93%)
Frame = +2
Query: 399 YVPVELCSLVSLQRYTKALTTLQRSSLVEKSRQKPLERMNVLNQALKTSNYGNEPMLKNC 458
Y+P+ELCSLVSLQRYTKAL+TLQR+SLVEKSRQKP ERM VL ALK+SNYG+EPML+NC
Sbjct: 2 YIPLELCSLVSLQRYTKALSTLQRASLVEKSRQKPQERMRVLTDALKSSNYGSEPMLRNC 181
Query: 459 GI 460
GI
Sbjct: 182 GI 187
>TC220730 homologue to UP|Q8LP00 (Q8LP00) ZLL/PNH homologous protein, partial
(10%)
Length = 556
Score = 107 bits (266), Expect = 3e-23
Identities = 55/120 (45%), Positives = 75/120 (61%)
Frame = +3
Query: 808 KICHPRNNDFYMCAHAGMIGTSRPTHYHVLLDDIGFSPDELQELVHSLSYVYQRSTTAIS 867
KICHP DFY+C+HAG+ GTSRP HYHVL D+ F+ DE+Q L ++L Y Y R T ++S
Sbjct: 3 KICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVS 182
Query: 868 VVAPICYAHLAATQIGQFMKFEDKSDTSSSHGGLTAAGVAPVVPQLPKLQDSVSSSMFFC 927
VV P YAHLAA + +M+ + + + S G A V LP L++ V + MF+C
Sbjct: 183 VVPPAYYAHLAAYRARFYME-PNVHEIAKSRG---ARSKDESVRPLPALKEKVKNVMFYC 350
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.317 0.136 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,917,475
Number of Sequences: 63676
Number of extensions: 639292
Number of successful extensions: 9462
Number of sequences better than 10.0: 146
Number of HSP's better than 10.0 without gapping: 5082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7217
length of query: 927
length of database: 12,639,632
effective HSP length: 106
effective length of query: 821
effective length of database: 5,889,976
effective search space: 4835670296
effective search space used: 4835670296
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Lotus: description of TM0031.13