BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0029b.2
(1016 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC203681 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expr... 50 5e-06
TC213615 similar to UP|Q9SUL7 (Q9SUL7) SNF1 like protein kinase ... 49 9e-06
TC216484 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabin... 49 1e-05
TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like ara... 48 2e-05
CO985160 48 2e-05
TC228914 similar to UP|DAH1_MOUSE (Q9QYB2) Dachshund homolog 1 (... 47 4e-05
TC226993 homologue to UP|GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 deh... 47 4e-05
TC203386 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expr... 47 4e-05
TC225560 similar to UP|Q9FUL8 (Q9FUL8) Arabinogalactan protein, ... 47 6e-05
TC217534 similar to GB|AAB62826.1|2252827|IG005I10 coded for by ... 46 7e-05
TC213885 weakly similar to UP|Q9VUB7 (Q9VUB7) CG32133-PA, partia... 46 9e-05
TC225559 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expr... 46 9e-05
TC226466 weakly similar to GB|AAD49970.1|5734705|F24J5 F24J5.4 {... 45 1e-04
TC219909 weakly similar to UP|ENL2_ARATH (Q9T076) Early nodulin-... 45 1e-04
TC203407 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-pr... 45 2e-04
TC220421 weakly similar to UP|GP1_CHLRE (Q9FPQ6) Vegetative cell... 44 3e-04
AW101289 44 5e-04
TC228085 similar to UP|Q9LK27 (Q9LK27) Gb|AAF01563.1, partial (17%) 44 5e-04
TC215894 similar to UP|Q96569 (Q96569) L-lactate dehydrogenase ... 43 6e-04
AI444066 similar to GP|9294409|dbj polygalacturonase inhibitor-l... 43 6e-04
>TC203681 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expressed in
cucumber hypocotyls, complete cds (Arabinogalactan
protein), partial (40%)
Length = 913
Score = 50.1 bits (118), Expect = 5e-06
Identities = 43/144 (29%), Positives = 60/144 (40%)
Frame = +3
Query: 549 SGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGAT 608
+ G +P A PTT+ AA T P A PA+ P+ + A VA+ +S
Sbjct: 60 AAVGGQSPAASPTTSPP-----------AATTTPFASPATAPSKPKSPAPVASPTSSSPP 206
Query: 609 AASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKS 668
A+S NA A + +P T SPP + A P+P T A + P+ +
Sbjct: 207 ASSP--NAATATPPASSP---------TVASPPSKAAAPAPVATPPAATPPA-------A 332
Query: 669 CPGAATTSEAAQIEQAPAPEVGSS 692
P AAT + PAP SS
Sbjct: 333 TPPAATPPAVTPVSSPPAPVPVSS 404
Score = 47.0 bits (110), Expect = 4e-05
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Frame = +3
Query: 547 TSSGAGTSNPGAQPTTA----------AAPKGKN--VAEASIAAATEPTAVP--ASTPAS 592
TS A T+ P A P TA A+P + + + A AT P + P AS P+
Sbjct: 99 TSPPAATTTPFASPATAPSKPKSPAPVASPTSSSPPASSPNAATATPPASSPTVASPPSK 278
Query: 593 AGATAAVA---AESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSP 649
A A A VA A + AT +A A +S P+ P S P AP +P
Sbjct: 279 AAAPAPVATPPAATPPAATPPAATPPAVTPVSSPPAPVPVSSPPAPVPVSSPPALAPTTP 458
Query: 650 PP-TRDAGSMPSPPHQGEKSCPGA---ATTSEAAQIEQAPAPEVGS--SSYYNMLP 699
P + +P+P + +K + + + + PAP VG+ SS +M P
Sbjct: 459 APVVAPSAEVPAPAPKSKKKTKKSKKHTAPAPSPSLLGPPAPPVGAPGSSQDSMSP 626
Score = 30.0 bits (66), Expect = 5.4
Identities = 28/102 (27%), Positives = 35/102 (33%)
Frame = -1
Query: 528 GAENQAESTKAPKRRRLTKTSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPA 587
GA A A LT T +G + GA G VA +AA
Sbjct: 475 GATTGAGVVGASAGGELTGTGAGGELTGTGAGGELTGVTAG-GVAAGGVAAGG---VAAG 308
Query: 588 STPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGE 629
AGA A +++VG A V A A D +GE
Sbjct: 307 GVATGAGAAALDGGDATVGDEAGGVAVAALGDEAGGDDDVGE 182
>TC213615 similar to UP|Q9SUL7 (Q9SUL7) SNF1 like protein kinase
(CBL-interacting protein kinase 4), partial (45%)
Length = 674
Score = 49.3 bits (116), Expect = 9e-06
Identities = 35/147 (23%), Positives = 64/147 (42%)
Frame = +3
Query: 547 TSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVG 606
T A T+ P + +T ++P S +++T P A AS+ S+ A AA + S
Sbjct: 246 TPCAASTTTPTSSKSTRSSPPRPR----STSSSTSPVA--ASSSPSSPAAAASRSPSPAA 407
Query: 607 ATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGE 666
+ +S+ ++A+ A +S T + TP + SPP + ++ S P
Sbjct: 408 TSRSSSPLSASATAMASPTETSSHRTSSSTPPATSRSPTSASPPSRNTSTTVSSTPPAAR 587
Query: 667 KSCPGAATTSEAAQIEQAPAPEVGSSS 693
+ P +++ +A P P +SS
Sbjct: 588 RPSPRQRSSAASATTAXKPTPGPAASS 668
>TC216484 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan
protein 1 precursor, partial (58%)
Length = 1213
Score = 48.9 bits (115), Expect = 1e-05
Identities = 40/152 (26%), Positives = 62/152 (40%), Gaps = 1/152 (0%)
Frame = +1
Query: 535 STKAPKRRRLTKTSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAG 594
S+ P R T +S T + TT+ +P + A + + P+ P S
Sbjct: 85 SSSPPSPTRTTSPASSQSTPSSPPSTTTSPSPTSPPKSTAKPPSPSAPSTTPPCRTFSRS 264
Query: 595 ATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRD 654
+ + +S +T++S +A +++ S T P SPP PP+PPP
Sbjct: 265 TPPSTPSRTSSPSTSSST-TSAPRSSTRSPT----------APPSPPQCTKPPAPPPDPP 411
Query: 655 AGSMPSPPHQGEKS-CPGAATTSEAAQIEQAP 685
A S SP EKS P TT+ + Q P
Sbjct: 412 ASS-TSPTSTAEKSHSPPKTTTAHSPQRSSNP 504
>TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like
arabinogalactan-protein 2, partial (57%)
Length = 1652
Score = 48.1 bits (113), Expect = 2e-05
Identities = 37/135 (27%), Positives = 51/135 (37%)
Frame = +2
Query: 539 PKRRRLTKTSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAA 598
P T S + TS+P +T +APK ++ + P++ P S P +
Sbjct: 215 PPSSTSTSPSPPSKTSSPSTSSSTTSAPKS-----STRSTTAPPSSPPCSRPPAPPPAPP 379
Query: 599 VAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSM 658
+ S A SA T A S+ + K T SP + APP PPT
Sbjct: 380 ATSTSPTSRPARSASPPKTTTAPSTPSTSNPSRKCPTT--SPSSKSAPPLAPPTPRHPPP 553
Query: 659 PSPPHQGEKSCPGAA 673
P PP CP A
Sbjct: 554 PPPPST*SPLCPNKA 598
Score = 43.9 bits (102), Expect = 4e-04
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
Frame = +2
Query: 547 TSSGAGTSNPGAQP--TTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESS 604
TS P + P TT+ +P + A+ + + P+ +P P+S + + +++S
Sbjct: 83 TSPACWPHTPASPPSTTTSPSPTWPKRSTAARPSPSWPSTMPPCPPSSTSTSPSPPSKTS 262
Query: 605 VGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPP--------------SPP 650
+T++S +A K++ S T + P PP APP SPP
Sbjct: 263 SPSTSSST-TSAPKSSTRSTTAPPSSPPCSRPPAPPP---APPATSTSPTSRPARSASPP 430
Query: 651 PTRDAGSMPSPPHQGEKSCPGAATTSEAAQIEQAPAP 687
T A S PS + K CP + +S++A P P
Sbjct: 431 KTTTAPSTPSTSNPSRK-CPTTSPSSKSAPPLAPPTP 538
Score = 31.6 bits (70), Expect = 1.8
Identities = 23/55 (41%), Positives = 25/55 (44%)
Frame = +2
Query: 81 NRPIVRSNSPLHATHLPKTIMTSNLPHASNTRHPSSFSPSPIKTLLPHCHPFPRP 135
+RP RS SP T P T TSN T PSS S P+ P HP P P
Sbjct: 401 SRP-ARSASPPKTTTAPSTPSTSNPSRKCPTTSPSSKSAPPLAPPTPR-HPPPPP 559
>CO985160
Length = 777
Score = 47.8 bits (112), Expect = 2e-05
Identities = 44/137 (32%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Frame = -1
Query: 492 LEDMNFTNAELLKARERRMARFSPKFNTEGDAKKRGGAENQAESTKAPKRRRLTKTSSGA 551
+E TNA A + A S T A + A +T A T +S+ A
Sbjct: 768 VESAAATNAATTSADAKPTAASSAVATTAAATSHATTATSSAPTTAA------TTSSAAA 607
Query: 552 GTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAV---AAESSVGAT 608
+ + PTTAA + A+ AAAT +A A+ S+ ATAA AA + AT
Sbjct: 606 AAAATSSAPTTAAT-----TSSAAAAAATTSSAAAAAATTSSAATAAATGPAAAACAAAT 442
Query: 609 AASAGVNATKAAASSDT 625
AA++ AT AA S+ T
Sbjct: 441 AAASANPATAAATSTST 391
Score = 45.1 bits (105), Expect = 2e-04
Identities = 37/109 (33%), Positives = 53/109 (47%), Gaps = 7/109 (6%)
Frame = -1
Query: 523 AKKRGGAENQAESTKAPKRRRLTKTSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEP 582
A A A ++ AP T +++ A A T++AA + A+ AAAT P
Sbjct: 630 ATTSSAAAAAAATSSAPTTAATTSSAAAA------AATTSSAAAAAATTSSAATAAATGP 469
Query: 583 TAVP-ASTPASAGATAAVAAESSVG------ATAASAGVNATKAAASSD 624
A A+ A+A A A AA +S ATAA++ V AT AAA++D
Sbjct: 468 AAAACAAATAAASANPATAAATSTSTTPTTTATAAASAVTATAAAAATD 322
Score = 35.4 bits (80), Expect = 0.13
Identities = 24/49 (48%), Positives = 29/49 (58%), Gaps = 1/49 (2%)
Frame = +2
Query: 574 ASIAAATEPTAVPASTPASAG-ATAAVAAESSVGATAASAGVNATKAAA 621
A++A E AV A+ A+AG AAVAAE V A AA+ V A AAA
Sbjct: 410 AAVAGFAEAAAVAAAQAAAAGPVAAAVAAEEVVAAAAAAEEVVAAAAAA 556
Score = 34.7 bits (78), Expect = 0.22
Identities = 33/121 (27%), Positives = 51/121 (41%), Gaps = 1/121 (0%)
Frame = -1
Query: 574 ASIAAATEPTAVPASTPASAGATA-AVAAESSVGATAASAGVNATKAAASSDTPIGEKEK 632
A+ +A +PTA ++ +A AT+ A A SS TAA+ A AAA+S P
Sbjct: 741 ATTSADAKPTAASSAVATTAAATSHATTATSSAPTTAATTSSAAAAAAATSSAPTTAATT 562
Query: 633 ENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKSCPGAATTSEAAQIEQAPAPEVGSS 692
+ + A + T A + + G + AA T+ AA A A +S
Sbjct: 561 SSAAAAAATTSSAAAAAATTSSAATAAA---TGPAAAACAAATA-AASANPATAAATSTS 394
Query: 693 S 693
+
Sbjct: 393 T 391
Score = 33.5 bits (75), Expect = 0.49
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -1
Query: 533 AESTKAPKRRRLTKTSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPAS---- 588
A ++ A T +++ A + A A P A A+ AA+ P A+
Sbjct: 570 ATTSSAAAAAATTSSAAAAAATTSSAATAAATGPAAAACAAATAAASANPATAAATSTST 391
Query: 589 TPASAGATAAVAAESSVGATAASAG 613
TP + ATAA +A ++ A AA+ G
Sbjct: 390 TPTTT-ATAAASAVTATAAAAATDG 319
>TC228914 similar to UP|DAH1_MOUSE (Q9QYB2) Dachshund homolog 1 (Dach1),
partial (3%)
Length = 784
Score = 47.0 bits (110), Expect = 4e-05
Identities = 45/189 (23%), Positives = 73/189 (37%), Gaps = 15/189 (7%)
Frame = +3
Query: 515 PKFNTEGDAKKRGGAENQAESTKAPKRRRLTKTSSGAGTSNPGAQPTTAAAPKGKNV--- 571
P +T + G A + + S A KRR S A +++P T++ A K+
Sbjct: 171 PSPSTTPTSSAPGNAPHSSPS--ASKRRPTPSGPSSAASTSPKPTSTSSRAAPSKSPFTW 344
Query: 572 ------AEASIAAATEPTAVPASTPASAGATAAVAAESSVGATAASAGVNA------TKA 619
S A+ P A AST ++ A + A S+ +A+ + T
Sbjct: 345 PSASLGTSMSSPASPPPPAPNASTSSTTSAASPALASSAANTASATTAPSLPSIPSRTTP 524
Query: 620 AASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKSCPGAATTSEAA 679
+ TP + +P + P + SP P+ + S SPP E P A T
Sbjct: 525 TTARSTPSSSNPTSSTSPTATPKRTRVSSPTPSSSSTSRSSPPSPKE---PTATVTVSHT 695
Query: 680 QIEQAPAPE 688
+ E+A P+
Sbjct: 696 RGEEANTPQ 722
Score = 30.0 bits (66), Expect = 5.4
Identities = 18/57 (31%), Positives = 24/57 (41%)
Frame = +3
Query: 637 PKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKSCPGAATTSEAAQIEQAPAPEVGSSS 693
P + P +PPS PP SP S PG A S + ++ P P SS+
Sbjct: 129 PPASPRSSSPPSSPP--------SPSTTPTSSAPGNAPHSSPSASKRRPTPSGPSSA 275
>TC226993 homologue to UP|GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase
(GDP-D-mannose dehydratase) (GMD) , partial (94%)
Length = 1388
Score = 47.0 bits (110), Expect = 4e-05
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
Frame = +2
Query: 539 PKRRRLTKTSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATE---PTAVPASTPASAGA 595
P R + T+ + T P A +T ++P + S+ + + PT P S+P + A
Sbjct: 293 PTRPA*SSTTPISPTPPPSAAGSTPSSPTRSTTSPLSLTSPSPSRYPTTPPTSSPPAPSA 472
Query: 596 TAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDA 655
++ + +S A ++ S P+ +PK PP APP+PPP
Sbjct: 473 SSRPSVPTSPPPAAPTSATTKPAPPRCSAPPL------RRSPKPPPSTPAPPTPPPNAPP 634
Query: 656 GSMPSPPHQGEKSCPGAATTS 676
P + S P A++S
Sbjct: 635 TGTP*TTARLTPSSPATASSS 697
Score = 32.0 bits (71), Expect = 1.4
Identities = 32/124 (25%), Positives = 42/124 (33%), Gaps = 26/124 (20%)
Frame = +2
Query: 604 SVGATAASAGVNATKAAASSDTPIGEKEKEN---ETPKSPPHQEAPP------------- 647
S T+ T+ A SS TPI + TP SP P
Sbjct: 257 SASTTSMWIPTTPTRPA*SSTTPISPTPPPSAAGSTPSSPTRSTTSPLSLTSPSPSRYPT 436
Query: 648 ----SPPPTRDAGSMPSPPHQGEKSCPGAATTS------EAAQIEQAPAPEVGSSSYYNM 697
S PP A S PS P + P +ATT A + ++P P + +
Sbjct: 437 TPPTSSPPAPSASSRPSVPTSPPPAAPTSATTKPAPPRCSAPPLRRSPKPPPSTPAPPTP 616
Query: 698 LPNA 701
PNA
Sbjct: 617 PPNA 628
>TC203386 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expressed in
cucumber hypocotyls, complete cds (Arabinogalactan
protein), partial (40%)
Length = 649
Score = 47.0 bits (110), Expect = 4e-05
Identities = 43/166 (25%), Positives = 63/166 (37%), Gaps = 5/166 (3%)
Frame = +1
Query: 549 SGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGAT 608
+ G +P A PTT++A ++ + P A P S+P ++ AA A T
Sbjct: 55 AAVGGQSPAAAPTTSSASPATAPSKPK-PKSPAPVASPTSSPPASSPNAATATPPVSSPT 231
Query: 609 AASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKS 668
AS A A ++ P+ +PP SPP S P+P S
Sbjct: 232 VASPPSKAAAPAPATTPPVATPPAATPPAATPPAVTPVSSPPAPVPVSSPPAP--VPVSS 405
Query: 669 CPGAATTSEAAQIE-----QAPAPEVGSSSYYNMLPNAIEPSEFLL 709
P A T+ A + APAP+ + + A PS LL
Sbjct: 406 PPALAPTTPAPVVAPSAEVPAPAPKSKKKTKKSKKHTAPAPSPALL 543
Score = 41.6 bits (96), Expect = 0.002
Identities = 40/158 (25%), Positives = 62/158 (38%), Gaps = 22/158 (13%)
Frame = +1
Query: 547 TSSGAGTSNPGAQPTTAAAPKGKNVAEASIAA---ATEPTAVP-ASTPASAGATAAVAAE 602
+S A T+ P T A+P K A A AT P A P A+TP + ++ A
Sbjct: 184 SSPNAATATPPVSSPTVASPPSKAAAPAPATTPPVATPPAATPPAATPPAVTPVSSPPAP 363
Query: 603 SSVGATAASAGVNATKAAA----------SSDTPIGEKEKENETPKSPPHQE-------- 644
V + A V++ A A S++ P + + +T KS H
Sbjct: 364 VPVSSPPAPVPVSSPPALAPTTPAPVVAPSAEVPAPAPKSKKKTKKSKKHTAPAPSPALL 543
Query: 645 APPSPPPTRDAGSMPSPPHQGEKSCPGAATTSEAAQIE 682
PP+PP + +P + S PG A + + + E
Sbjct: 544 GPPAPP-------VGAPGSSQDASSPGPAVSEDESGAE 636
Score = 29.6 bits (65), Expect = 7.0
Identities = 21/87 (24%), Positives = 34/87 (38%)
Frame = +1
Query: 605 VGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQ 664
+G A+ G + AA ++ + PKSP +P S PP + + P
Sbjct: 40 IGIVVAAVGGQSPAAAPTTSSASPATAPSKPKPKSPAPVASPTSSPPASSPNAATATPPV 219
Query: 665 GEKSCPGAATTSEAAQIEQAPAPEVGS 691
+ A+ S+AA A P V +
Sbjct: 220 SSPTV--ASPPSKAAAPAPATTPPVAT 294
>TC225560 similar to UP|Q9FUL8 (Q9FUL8) Arabinogalactan protein, partial
(48%)
Length = 1030
Score = 46.6 bits (109), Expect = 6e-05
Identities = 47/198 (23%), Positives = 69/198 (34%), Gaps = 9/198 (4%)
Frame = +2
Query: 549 SGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGAT 608
+G G +P A P+ A T A PA P++ + A VA+ S
Sbjct: 119 AGVGGQSPAAAPSNTPA--------------TPAAATPAQAPSTPNSPAPVASPKSSPPA 256
Query: 609 AASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKS 668
++ AT A++ + +P TP +P PP+ P + SPP S
Sbjct: 257 SSPKPATATPASSPAASP-------TTTPAAPAPATKPPAASPPPAPVPVSSPPAPVPVS 415
Query: 669 CPGAATTSEAAQIEQAPAPEVGSSSYYNMLPNAIEPSEFLLA---------GLNRDVIEK 719
P A A APAP A PS LL G + D
Sbjct: 416 SPPAPVPVAAPTTPVAPAPAPSKHKKKGKKHGAPAPSPSLLGPPAPPTGAPGPSEDASSP 595
Query: 720 EVLSRGLNDTKEETLACL 737
+ +++ ET+ CL
Sbjct: 596 GPATAANDESGAETIMCL 649
Score = 45.8 bits (107), Expect = 9e-05
Identities = 43/156 (27%), Positives = 61/156 (38%), Gaps = 10/156 (6%)
Frame = +2
Query: 548 SSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGA 607
S A SN A P A + + + A+ ++ PAS+P A AT A + +S
Sbjct: 137 SPAAAPSNTPATPAAATPAQAPSTPNSPAPVASPKSSPPASSPKPATATPASSPAASPTT 316
Query: 608 TAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSP----PPTRDAGSMPSPPH 663
T A A ATK A+S P +P +P +PP+P PT P+P
Sbjct: 317 TPA-APAPATKPPAASPPP---APVPVSSPPAPVPVSSPPAPVPVAAPTTPVAPAPAPSK 484
Query: 664 QGEKS------CPGAATTSEAAQIEQAPAPEVGSSS 693
+K P + A AP P +SS
Sbjct: 485 HKKKGKKHGAPAPSPSLLGPPAPPTGAPGPSEDASS 592
Score = 43.1 bits (100), Expect = 6e-04
Identities = 40/153 (26%), Positives = 54/153 (35%), Gaps = 5/153 (3%)
Frame = +2
Query: 514 SPKFNTEGDAKKRGGAENQAESTKAPKRRRLTKTSSGAGTSNPGAQPTTAAAPKGKNVAE 573
+P T A + S K+ K ++ S+P A PTT A
Sbjct: 170 TPAAATPAQAPSTPNSPAPVASPKSSPPASSPKPATATPASSPAASPTTTPA-------- 325
Query: 574 ASIAAATEPTAVPASTPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKE 633
A A P A P P + A SS A A A A + + +K K+
Sbjct: 326 APAPATKPPAASPPPAPVPVSSPPAPVPVSSPPAPVPVAAPTTPVAPAPAPSKHKKKGKK 505
Query: 634 NETPKSPPHQEAPPSPP-----PTRDAGSMPSP 661
+ P P PP+PP P+ DA S P P
Sbjct: 506 HGAPAPSPSLLGPPAPPTGAPGPSEDASS-PGP 601
Score = 38.9 bits (89), Expect = 0.012
Identities = 44/174 (25%), Positives = 62/174 (35%), Gaps = 8/174 (4%)
Frame = +2
Query: 527 GGAENQAESTKAPKRRRLTKTSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVP 586
GG A + P + T N P A+PK A + A TA P
Sbjct: 128 GGQSPAAAPSNTPATPAAATPAQAPSTPN---SPAPVASPKSSPPASSPKPA----TATP 286
Query: 587 ASTPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAP 646
AS+PA++ T A + AAS A +S P+ P + P
Sbjct: 287 ASSPAASPTTTPAAPAPATKPPAASP-PPAPVPVSSPPAPVPVSSPPAPVPVAAPTTPVA 463
Query: 647 PSPPPT-------RDAGSMPSPPHQGEKSCP-GAATTSEAAQIEQAPAPEVGSS 692
P+P P+ + PSP G + P GA SE A +P P ++
Sbjct: 464 PAPAPSKHKKKGKKHGAPAPSPSLLGPPAPPTGAPGPSEDA---SSPGPATAAN 616
>TC217534 similar to GB|AAB62826.1|2252827|IG005I10 coded for by A. thaliana
cDNA N96903 {Arabidopsis thaliana;} , partial (98%)
Length = 1147
Score = 46.2 bits (108), Expect = 7e-05
Identities = 38/141 (26%), Positives = 63/141 (43%)
Frame = +3
Query: 547 TSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVG 606
T S +P A + + ++++ +++A PT AST +SA ATA + +
Sbjct: 129 TLSSPSRGSPSASSSPS*GSTSTSLSQNALSAT--PTRCSASTSSSA-ATALLRLPPAPP 299
Query: 607 ATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGE 666
AT+ SA +SS P + + T + PPS P A + P+PP
Sbjct: 300 ATSTSATTAPLSTPSSSPLPSAARSPASPTASASSPASFPPSLPSPSAATAPPTPPE--S 473
Query: 667 KSCPGAATTSEAAQIEQAPAP 687
+S AT+S A + ++A P
Sbjct: 474 RSSSRGATSSSARRAQRAVNP 536
>TC213885 weakly similar to UP|Q9VUB7 (Q9VUB7) CG32133-PA, partial (4%)
Length = 540
Score = 45.8 bits (107), Expect = 9e-05
Identities = 32/96 (33%), Positives = 49/96 (50%)
Frame = +1
Query: 529 AENQAESTKAPKRRRLTKTSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPAS 588
A + A +T A T+S A + + TAAA ++ AAT P A ++
Sbjct: 46 ATSSAVATTAAATSHAATTTSSAAAAAAASSAATAAA------TSSATTAATAPAAAASA 207
Query: 589 TPASAGATAAVAAESSVGATAASAGVNATKAAASSD 624
TPA+A A A+ + + ATAA++ V AT A A++D
Sbjct: 208 TPATA-AAASTSTTPTTTATAAASAVAATAATAATD 312
Score = 43.9 bits (102), Expect = 4e-04
Identities = 27/75 (36%), Positives = 41/75 (54%)
Frame = +1
Query: 549 SGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGAT 608
S A T+ A+PT ++ A S AA T +A A+ AS+ ATAA + ++ AT
Sbjct: 7 SAAATAPADAKPTATSSAVATTAAATSHAATTTSSAAAAAA-ASSAATAAATSSATTAAT 183
Query: 609 AASAGVNATKAAASS 623
A +A +AT A A++
Sbjct: 184 APAAAASATPATAAA 228
Score = 33.5 bits (75), Expect = 0.49
Identities = 29/103 (28%), Positives = 40/103 (38%)
Frame = +1
Query: 577 AAATEPTAVPASTPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENET 636
AAAT P A A++ A A AA +S AT S+ A AAA+S T
Sbjct: 10 AAATAPA--DAKPTATSSAVATTAAATSHAATTTSS---AAAAAAASSAATAAATSSATT 174
Query: 637 PKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKSCPGAATTSEAA 679
+ P A +P A + +P + A T+ A
Sbjct: 175 AATAPAAAASATPATAAAASTSTTPTTTATAAASAVAATAATA 303
Score = 33.1 bits (74), Expect = 0.63
Identities = 26/90 (28%), Positives = 33/90 (35%), Gaps = 13/90 (14%)
Frame = +1
Query: 535 STKAPKRRRLTKTSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAA-------------TE 581
+T A T TSS A + + T AA A A AAA T
Sbjct: 67 TTAAATSHAATTTSSAAAAAAASSAATAAATSSATTAATAPAAAASATPATAAAASTSTT 246
Query: 582 PTAVPASTPASAGATAAVAAESSVGATAAS 611
PT + ++ ATAA AA G +S
Sbjct: 247 PTTTATAAASAVAATAATAATDGWGRNGSS 336
Score = 30.0 bits (66), Expect = 5.4
Identities = 25/80 (31%), Positives = 32/80 (39%), Gaps = 4/80 (5%)
Frame = -2
Query: 556 PGAQPTTAAAPKGKNVAEASIAAATEPTAVPA----STPASAGATAAVAAESSVGATAAS 611
P A A + A A + E A A + A+AGA AAV AE A AA
Sbjct: 314 PSVAAVAAVAATAEAAAVAVVVGVVEVEAAAAVAGVAEAAAAGAVAAVVAEEVAAAVAAE 135
Query: 612 AGVNATKAAASSDTPIGEKE 631
A AAA+ + + E
Sbjct: 134 ---EAAAAAAAEEVVVAACE 84
>TC225559 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expressed in
cucumber hypocotyls, complete cds (Arabinogalactan
protein), partial (47%)
Length = 870
Score = 45.8 bits (107), Expect = 9e-05
Identities = 43/143 (30%), Positives = 60/143 (41%), Gaps = 3/143 (2%)
Frame = +3
Query: 549 SGAGTSNPGAQPT-TAAAPKGKNVAEA--SIAAATEPTAVPASTPASAGATAAVAAESSV 605
+G G +P A P+ T A P A+A ++ + P A P S+P +A + AA +
Sbjct: 120 AGVGGQSPAAAPSNTPATPAAATPAQAPSTVPKSPAPVASPKSSPPAATPASTPAASPT- 296
Query: 606 GATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQG 665
T +A TK A+S P P +PP P S PP S P P
Sbjct: 297 --TTPAAPAPVTKPPAASPPPA------TPPPATPPPAPVPVSSPPAPVPVSSPPAP--- 443
Query: 666 EKSCPGAATTSEAAQIEQAPAPE 688
P AA T+ A +PAP+
Sbjct: 444 ---VPVAAPTTPVA---PSPAPK 494
Score = 43.5 bits (101), Expect = 5e-04
Identities = 50/152 (32%), Positives = 60/152 (38%), Gaps = 7/152 (4%)
Frame = +3
Query: 532 QAEST--KAPKRRRLTKTSSGAGT--SNPGAQPTT---AAAPKGKNVAEASIAAATEPTA 584
QA ST K+P K+S A T S P A PTT A AP K A AS AT P A
Sbjct: 195 QAPSTVPKSPAPVASPKSSPPAATPASTPAASPTTTPAAPAPVTKPPA-ASPPPATPPPA 371
Query: 585 VPASTPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQE 644
P P + A SS A A T A S P +K+ + +P
Sbjct: 372 TPPPAPVPVSSPPAPVPVSSPPAPVPVAA--PTTPVAPSPAPKHKKKGKKHGAPAPSPLL 545
Query: 645 APPSPPPTRDAGSMPSPPHQGEKSCPGAATTS 676
PP+PP P P + S PG T +
Sbjct: 546 GPPAPPT-----GAPGPSE--DASSPGPGTAA 620
>TC226466 weakly similar to GB|AAD49970.1|5734705|F24J5 F24J5.4 {Arabidopsis
thaliana;} , partial (22%)
Length = 978
Score = 45.4 bits (106), Expect = 1e-04
Identities = 38/138 (27%), Positives = 55/138 (39%), Gaps = 10/138 (7%)
Frame = +1
Query: 560 PTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGATAASAGVNATKA 619
P+ A AP AS+ A + PT + A++P+S G AV +S T+ ++ A
Sbjct: 46 PSNAQAP-------ASVPANSPPTTLAATSPSS-GTPPAVTQAASPPTTSNPPTISQPPA 201
Query: 620 AASSD----TPIGEKEKENETPKSPPHQEAPPSPPPTRDAGS------MPSPPHQGEKSC 669
+ TP K +PK+P Q PP PP + +P PP
Sbjct: 202 IVAPKPAPVTPPAPKVAPASSPKAPTPQTPPPQPPKVSPVAAPTLPPPLPPPPVATPPPL 381
Query: 670 PGAATTSEAAQIEQAPAP 687
P A+ APAP
Sbjct: 382 PPPKIAPTPAKTSPAPAP 435
>TC219909 weakly similar to UP|ENL2_ARATH (Q9T076) Early nodulin-like protein
2 precursor (Phytocyanin-like protein), partial (21%)
Length = 943
Score = 45.4 bits (106), Expect = 1e-04
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 5/148 (3%)
Frame = +1
Query: 560 PTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGATAASAGVNATKA 619
P T+ +P +A+ + P P+ + S + A + +VG A S ++
Sbjct: 244 PKTSPSPSPSQSPKANPPTVSPPLPSPSPSVHSKSLSPASSPVPAVGTPAISPAISIPTL 423
Query: 620 AASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMP-----SPPHQGEKSCPGAAT 674
A + TP P P +PPSP P+ + P SPP G S P A
Sbjct: 424 APETGTP---------PPSLGPSSSSPPSPGPSSSSPPSPGPSSSSPPPAGPTSPPSLAP 576
Query: 675 TSEAAQIEQAPAPEVGSSSYYNMLPNAI 702
+S + AP+P+ +S +++ P+++
Sbjct: 577 SSNST----APSPK---NSGFSVAPSSV 639
Score = 33.5 bits (75), Expect = 0.49
Identities = 19/59 (32%), Positives = 29/59 (48%), Gaps = 3/59 (5%)
Frame = +1
Query: 636 TPKSPPHQEAPPSPPPTRDAGSMP---SPPHQGEKSCPGAATTSEAAQIEQAPAPEVGS 691
TPK+PP + PSP P++ + P SPP P + S++ +P P VG+
Sbjct: 223 TPKTPPFPKTSPSPSPSQSPKANPPTVSPP----LPSPSPSVHSKSLSPASSPVPAVGT 387
>TC203407 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-protein
(AtAGP4) (AT5g10430/F12B17_220), partial (50%)
Length = 966
Score = 44.7 bits (104), Expect = 2e-04
Identities = 39/116 (33%), Positives = 44/116 (37%), Gaps = 3/116 (2%)
Frame = +2
Query: 538 APKRRRLTKTSSGAGTSNPGAQPTTAAAPKGKNVAEASI---AAATEPTAVPASTPASAG 594
AP + T S S P PTT A P A+ AA P A P TPA A
Sbjct: 206 APSQPPTTTPSPPPPRSAPAPAPTTPATPPPATPPPAATPPPAATPPPAATP--TPAPAP 379
Query: 595 ATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPP 650
TAA SS A+ S T + S +TP G P P A P PP
Sbjct: 380 PTAAPTPASSPAASPPSPSPTVTPSPTSPNTPPG--------PSPGPSGSAEPPPP 523
Score = 43.9 bits (102), Expect = 4e-04
Identities = 40/132 (30%), Positives = 50/132 (37%), Gaps = 8/132 (6%)
Frame = +2
Query: 556 PGAQP-----TTAAAPKGKNV-AEASIAAATEPTAVP--ASTPASAGATAAVAAESSVGA 607
PGA P TT + P ++ A A AT P A P A+TP A A + A
Sbjct: 197 PGAAPSQPPTTTPSPPPPRSAPAPAPTTPATPPPATPPPAATPPPAATPPPAATPTPAPA 376
Query: 608 TAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEK 667
+A A+ AAS +P TP SP PP P P + P PP
Sbjct: 377 PPTAAPTPASSPAASPPSP-----SPTVTP-SPTSPNTPPGPSPGPSGSAEPPPPSAAFS 538
Query: 668 SCPGAATTSEAA 679
+ TS A
Sbjct: 539 ASKAFIATSALA 574
Score = 43.5 bits (101), Expect = 5e-04
Identities = 41/132 (31%), Positives = 48/132 (36%)
Frame = +2
Query: 550 GAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGATA 609
GA S P PTT +P A A A T P P +TP A AT AA AT
Sbjct: 200 GAAPSQP---PTTTPSPPPPRSAPAP--APTTPATPPPATPPPA-ATPPPAATPPPAATP 361
Query: 610 ASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKSC 669
A T A + +P +P SP P P G P P E
Sbjct: 362 TPAPAPPTAAPTPASSPAA-------SPPSPSPTVTPSPTSPNTPPGPSPGPSGSAEPPP 520
Query: 670 PGAATTSEAAQI 681
P AA ++ A I
Sbjct: 521 PSAAFSASKAFI 556
Score = 36.6 bits (83), Expect = 0.057
Identities = 27/99 (27%), Positives = 38/99 (38%)
Frame = +2
Query: 589 TPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPS 648
T S T + + GA + ++ + P + T SPP + P+
Sbjct: 86 THRSTATTTTFSLDMGSGAVQLFLILGLLASSCLAQAPGAAPSQPPTTTPSPPPPRSAPA 265
Query: 649 PPPTRDAGSMPSPPHQGEKSCPGAATTSEAAQIEQAPAP 687
P PT A P+ P + P AAT AA APAP
Sbjct: 266 PAPTTPATPPPATPPPA-ATPPPAATPPPAATPTPAPAP 379
Score = 29.6 bits (65), Expect = 7.0
Identities = 33/146 (22%), Positives = 48/146 (32%), Gaps = 4/146 (2%)
Frame = +2
Query: 544 LTKTSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAES 603
L K S + T A TT + G + + ++ A P +A + S
Sbjct: 59 LLKLSYLSLTHRSTATTTTFSLDMGSGAVQLFLILGLLASSCLAQAPGAAPSQPPTTTPS 238
Query: 604 SVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPS--PPPTRDAGSMPSP 661
+A A T A TP PP PP+ PPP P+P
Sbjct: 239 PPPPRSAPAPAPTTPATPPPATP-------------PPAATPPPAATPPPAATPTPAPAP 379
Query: 662 PHQG--EKSCPGAATTSEAAQIEQAP 685
P S P A+ S + + +P
Sbjct: 380 PTAAPTPASSPAASPPSPSPTVTPSP 457
>TC220421 weakly similar to UP|GP1_CHLRE (Q9FPQ6) Vegetative cell wall
protein gp1 precursor (Hydroxyproline-rich glycoprotein
1), partial (13%)
Length = 1409
Score = 44.3 bits (103), Expect = 3e-04
Identities = 38/159 (23%), Positives = 64/159 (39%), Gaps = 3/159 (1%)
Frame = +3
Query: 554 SNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGATAAS-- 611
S P P +A P A+ + + PTA P S S ++ + + S +TA S
Sbjct: 240 SPPSTMPPSATPPS----PSATSSPSASPTAPPTSPSPSPPSSPSPPSAPSPSSTAPSPP 407
Query: 612 AGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKSCPG 671
+ T + S +P + SP + +P SP PT + S P P + P
Sbjct: 408 SASPPTSPSPSPPSPASTASANSPASGSPTSRTSPTSPSPT--STSKPPAPSSSSPA*PS 581
Query: 672 AATTSEAAQIEQAPAPEVGS-SSYYNMLPNAIEPSEFLL 709
+ + I P+P + +S+ ++ P + FLL
Sbjct: 582 SKPSPSPTPISPDPSPATSTPTSHTSISPITASKATFLL 698
Score = 42.0 bits (97), Expect = 0.001
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Frame = +3
Query: 577 AAATEPTAVPASTPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENET 636
A + T P++TP S AT++ +A + T+ S ++ + S+ +P + T
Sbjct: 234 APSPPSTMPPSATPPSPSATSSPSASPTAPPTSPSPSPPSSPSPPSAPSP-------SST 392
Query: 637 PKSPPHQEAPPSP---PPTRDAGSMPSPPHQGEKSCPGAATTSEAAQIEQAPAPEVGS-- 691
SPP P SP PP+ + + + P G + + T+ + PAP S
Sbjct: 393 APSPPSASPPTSPSPSPPSPASTASANSPASGSPTSRTSPTSPSPTSTSKPPAPSSSSPA 572
Query: 692 --SSYYNMLPNAIEP 704
SS + P I P
Sbjct: 573 *PSSKPSPSPTPISP 617
Score = 34.7 bits (78), Expect = 0.22
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = +3
Query: 630 KEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKSCPGAATTSEAAQIEQAPAPEV 689
K++ SPPH+ PSPP T + +PP S P A+ T A +P+P
Sbjct: 186 KQQPLNPSTSPPHRTPAPSPPSTMPPSA--TPPSPSATSSPSASPT--APPTSPSPSPPS 353
Query: 690 GSSSYYNMLPNAIEPS 705
S P++ PS
Sbjct: 354 SPSPPSAPSPSSTAPS 401
>AW101289
Length = 412
Score = 43.5 bits (101), Expect = 5e-04
Identities = 29/98 (29%), Positives = 44/98 (44%)
Frame = +3
Query: 582 PTAVPASTPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPP 641
P P++TPA+ T++ A SS +T ++T + S P + TP SPP
Sbjct: 33 PWTAPSTTPATTSPTSSPPA-SSKSSTWTPTSFSSTTSQNSPPPP----SETTTTPSSPP 197
Query: 642 HQEAPPSPPPTRDAGSMPSPPHQGEKSCPGAATTSEAA 679
A P+ PT S P+PP AT++ A+
Sbjct: 198 PNTATPTSAPTSPHPSGPTPPSPSPSPAAPPATSTPAS 311
>TC228085 similar to UP|Q9LK27 (Q9LK27) Gb|AAF01563.1, partial (17%)
Length = 947
Score = 43.5 bits (101), Expect = 5e-04
Identities = 43/153 (28%), Positives = 69/153 (44%), Gaps = 9/153 (5%)
Frame = +1
Query: 867 LAEQEKKSAESLALAKSDMEAVMQATSEEIKKATETHAEALATKDAEIASQLAKIKSLED 926
L + EK+ E L + + D+E + ++ + EA +AE A++ + + LE
Sbjct: 1 LEKDEKRDPEKLRIEREDLERRQKEEKARLQAEAKAAEEAQRKAEAEAAAEAKRKRELER 180
Query: 927 ELATEKAKAIEAREQAADIALDNR--ERGFYLAKDQAQHLYPSFDFSAMGVMKEITAA-- 982
E A + A++ E+ DI ++ E L+ +HL PSF KE T+A
Sbjct: 181 EAARQ---ALQKMEKTVDINENSHFLEDLEMLSAVHDEHL-PSF--------KEETSADQ 324
Query: 983 -----GLVGPDDPPLIDQNLWTATEEEEEEEEQ 1010
G + PL L+ EEEEEEEE+
Sbjct: 325 PQDGLGGIKLQGNPLEQLGLYMKEEEEEEEEEE 423
>TC215894 similar to UP|Q96569 (Q96569) L-lactate dehydrogenase , complete
Length = 1675
Score = 43.1 bits (100), Expect = 6e-04
Identities = 41/142 (28%), Positives = 63/142 (43%), Gaps = 16/142 (11%)
Frame = +1
Query: 536 TKAPKRRRLTKTSSGAGTSNP---GAQPTTAAAPKGKNVAEASIAAATEPTAVPAST--- 589
++ P R + TSS + T P A+ +T++ P + A S T P+ PA T
Sbjct: 313 SRRPSSLRTSPTSSSSSTPTPTSSAARCSTSSTPPPSSPAPRSTPPPTPPSP-PAPTSAS 489
Query: 590 --PASAGATAAVAAESSVGATAASAGV-------NATKAAASSDTP-IGEKEKENETPKS 639
PA A + A+ A+ SS G + +SA + T+ ++S TP +P S
Sbjct: 490 SPPAPARSPASHASTSSRGTSPSSAPLFPLSSVTPPTQLSSSFPTPSTSSPTSRGSSPAS 669
Query: 640 PPHQEAPPSPPPTRDAGSMPSP 661
PP + P+P T A SP
Sbjct: 670 PPTASSAPAPTWTLPASVSSSP 735
Score = 38.1 bits (87), Expect = 0.020
Identities = 30/127 (23%), Positives = 50/127 (38%)
Frame = +1
Query: 580 TEPTAVPASTPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKS 639
T P P + + ++A A +S + T +++S+ TP + + +
Sbjct: 235 TTPPLPPRPSATTRSPSSAPATWEWPSRRPSSLRTSPTSSSSSTPTPTSSAARCSTSSTP 414
Query: 640 PPHQEAPPSPPPTRDAGSMPSPPHQGEKSCPGAATTSEAAQIEQAPAPEVGSSSYYNMLP 699
PP AP S PP + PSPP S P A S A+ + SS+ L
Sbjct: 415 PPSSPAPRSTPPP----TPPSPPAPTSASSPPAPARSPASHASTSSRGTSPSSAPLFPLS 582
Query: 700 NAIEPSE 706
+ P++
Sbjct: 583 SVTPPTQ 603
>AI444066 similar to GP|9294409|dbj polygalacturonase inhibitor-like protein
{Arabidopsis thaliana}, partial (27%)
Length = 336
Score = 43.1 bits (100), Expect = 6e-04
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Frame = +1
Query: 554 SNP-GAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGATAASA 612
SNP PTTA + +G A+ A+ TA P ++P SA A S + A+
Sbjct: 22 SNPLSGSPTTAYSTRGPAPTAATTGTASPATATPTASPRSASAPVPSTPPSRSPSVLATC 201
Query: 613 GVNATKAAAS------SDTPIGEKEKENETPKSPPHQEAPPSPPP 651
V + + AS S +PIG + SPP + S P
Sbjct: 202 PVPSRRRFASSLTSPASSSPIGRESPARSRAASPPSSSSASSTSP 336
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.313 0.129 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,790,649
Number of Sequences: 63676
Number of extensions: 761305
Number of successful extensions: 13491
Number of sequences better than 10.0: 645
Number of HSP's better than 10.0 without gapping: 7675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11067
length of query: 1016
length of database: 12,639,632
effective HSP length: 107
effective length of query: 909
effective length of database: 5,826,300
effective search space: 5296106700
effective search space used: 5296106700
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0029b.2