BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0029a.7
(411 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC207878 similar to UP|Q9FI34 (Q9FI34) Emb|CAB68190.1, partial (... 234 7e-62
AI437699 similar to GP|15810016|gb| AT3g58520/F14P22_110 {Arabid... 201 6e-52
TC232732 132 4e-31
AW348521 similar to GP|15810016|gb| AT3g58520/F14P22_110 {Arabid... 95 7e-20
TC211528 weakly similar to UP|GAS1_YEAST (P22146) Glycolipid anc... 70 2e-12
BE021436 62 4e-10
AW164826 49 4e-06
TC222129 35 2e-05
BQ296834 39 0.003
TC224510 similar to UP|Q9FI34 (Q9FI34) Emb|CAB68190.1, partial (4%) 39 0.004
TC224244 similar to UP|Q6NQB8 (Q6NQB8) At4g08940, partial (16%) 36 0.028
CO984560 33 0.23
TC207722 homologue to UP|Q43466 (Q43466) Protein kinase 3 , part... 32 0.52
TC233170 similar to UP|Q6ZK44 (Q6ZK44) Kelch repeat-containing p... 32 0.68
BE801809 similar to GP|17221599|dbj GPRI1 {Arabidopsis thaliana}... 31 0.89
BM308634 similar to GP|15912245|gb| AT3g27220/K17E12_4 {Arabidop... 31 0.89
BI893128 30 2.0
TC225036 similar to UP|O65357 (O65357) Aquaporin 2, partial (92%) 30 2.0
TC206922 similar to UP|Q9LYY2 (Q9LYY2) DNAJ protein-like, partia... 30 2.0
TC207877 weakly similar to UP|Q9FI34 (Q9FI34) Emb|CAB68190.1, pa... 30 2.6
>TC207878 similar to UP|Q9FI34 (Q9FI34) Emb|CAB68190.1, partial (44%)
Length = 1266
Score = 234 bits (596), Expect = 7e-62
Identities = 121/291 (41%), Positives = 181/291 (61%), Gaps = 2/291 (0%)
Frame = +2
Query: 85 FIRRYPTLFHE--FPHPRWPSLPCFRLTDTALLLHSQEQSLHNHHENDTVERLSKFLMMT 142
FIRRYP +F+E F +PCF L+ AL LH +E ++ ++ + +RL K LM+T
Sbjct: 26 FIRRYPNIFNESSFLDSGGSPVPCFSLSPEALELHHEEVNILQQNQLELRDRLCKLLMLT 205
Query: 143 KTRTVPLVSLYPLKWDIGLPDSFEKTLIPKFPDQFQFVKAPNGVSAVRLSKWCEEFAVSA 202
R +PL ++ LKWD+GLP ++ + +P P+ F +V+ P+ ++L W ++ A+
Sbjct: 206 SDRILPLQTIDQLKWDLGLPYDYQHSFVPNHPESFLYVRLPDDRIGLKLLFWDDKLAIPE 385
Query: 203 LQKSNERDGGDDGYRDFKRGKAALVFPMRFPRGYGAQKKVRFWMDEFHKLPYISPYADSS 262
LQK+ + D K G +L FP+ F RG+G ++K W+ E+ KLPY SPY ++S
Sbjct: 386 LQKNTSLQQKAE---DIKNG--SLEFPISFTRGFGLKRKCMEWLKEWQKLPYTSPYINAS 550
Query: 263 KIDPNSDLMEKRVVGVLHELLSLTMHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYL 322
+DP +D+ EKR+VGV HELL LT+HK+T+R + +LR L LP KFT++F R+PGIFY+
Sbjct: 551 HLDPRTDVSEKRIVGVFHELLHLTLHKQTERKNVSNLRRPLALPQKFTKVFERHPGIFYI 730
Query: 323 SLKCKTTTVTLREGYARGKLVDPHPLVRHRDKFYHVMKTGLLYRGDGSIPK 373
S + T TV LRE Y + V H LV+ R++F ++K GLL R G K
Sbjct: 731 SKRSDTQTVVLREAYNGQEPVQNHALVQIREEFASLLKKGLLDRSKGVYKK 883
>AI437699 similar to GP|15810016|gb| AT3g58520/F14P22_110 {Arabidopsis
thaliana}, partial (17%)
Length = 382
Score = 201 bits (510), Expect = 6e-52
Identities = 94/129 (72%), Positives = 112/129 (85%)
Frame = +3
Query: 160 GLPDSFEKTLIPKFPDQFQFVKAPNGVSAVRLSKWCEEFAVSALQKSNERDGGDDGYRDF 219
GLPD+F KTL+P+FP+ FQFVK+PNGV +++LS+W +E AVSALQK NE G YR+F
Sbjct: 3 GLPDTFHKTLVPQFPNHFQFVKSPNGVVSLKLSRWPDELAVSALQKHNE---GGTHYREF 173
Query: 220 KRGKAALVFPMRFPRGYGAQKKVRFWMDEFHKLPYISPYADSSKIDPNSDLMEKRVVGVL 279
KRG++AL FPMRFPRGYGAQ KVR WM+EF KLPY+SPY DS+KIDPNSDLMEKRVVGVL
Sbjct: 174 KRGQSALAFPMRFPRGYGAQTKVRTWMEEFQKLPYVSPYVDSTKIDPNSDLMEKRVVGVL 353
Query: 280 HELLSLTMH 288
HE+LSLT+H
Sbjct: 354 HEILSLTLH 380
>TC232732
Length = 796
Score = 132 bits (331), Expect = 4e-31
Identities = 64/136 (47%), Positives = 89/136 (65%)
Frame = +3
Query: 225 ALVFPMRFPRGYGAQKKVRFWMDEFHKLPYISPYADSSKIDPNSDLMEKRVVGVLHELLS 284
A+ FP +G ++K+ W++EF KLPYISPY D S +DPNSD+ +KR+VGVLHELLS
Sbjct: 48 AIEFPFFPSKGLRLRRKIENWLNEFQKLPYISPYDDFSNLDPNSDIADKRLVGVLHELLS 227
Query: 285 LTMHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVTLREGYARGKLVD 344
L + +R L L++ LP K R F R+P +FYLS + KT TV L+E Y+ ++
Sbjct: 228 LFVEHSAERKKLFCLKKYFGLPQKVHRAFERHPHMFYLSFRNKTCTVILKEAYSNKSAIE 407
Query: 345 PHPLVRHRDKFYHVMK 360
HPL+R R K+ +MK
Sbjct: 408 KHPLLRVRKKYIKLMK 455
>AW348521 similar to GP|15810016|gb| AT3g58520/F14P22_110 {Arabidopsis
thaliana}, partial (9%)
Length = 691
Score = 94.7 bits (234), Expect = 7e-20
Identities = 49/77 (63%), Positives = 56/77 (72%)
Frame = -1
Query: 328 TTTVTLREGYARGKLVDPHPLVRHRDKFYHVMKTGLLYRGDGSIPKPEGGALLLDEIGDE 387
TTTVTL+EGY GKLVDPH L RHRDKFYHVM+TGLLYRGDGS+ KP + DE+
Sbjct: 691 TTTVTLKEGYQSGKLVDPHXLARHRDKFYHVMQTGLLYRGDGSL-KPRENKIENDEL--- 524
Query: 388 GSEEEEVETSDEFSEGE 404
E+EVE SD+ E E
Sbjct: 523 -RSEDEVEMSDQLCESE 476
>TC211528 weakly similar to UP|GAS1_YEAST (P22146) Glycolipid anchored
surface protein precursor (Glycoprotein GP115), partial
(6%)
Length = 548
Score = 69.7 bits (169), Expect = 2e-12
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Frame = +3
Query: 266 PNSDLMEKRVVGVLHELLSLTMHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLK 325
P S EK GV+HE+LSLT+ K+T ++ REE + + R+P +FY+SLK
Sbjct: 3 PGSREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHPDMFYVSLK 182
Query: 326 CKTTTVTLREGYARGKLVDPHPLVRHRDKFYHVMKTGLLYRGDGSIPKPEGGALLLDEIG 385
+V LREGY +LV+ L+ ++K ++ PK ++ D +
Sbjct: 183 GDRDSVFLREGYRDSQLVEKDRLLLIKEKLRTLVNV-------PRFPKGPARRIVEDSMR 341
Query: 386 D-EGSEEEEVETSDEFSE 402
+ +G E+E + +E+SE
Sbjct: 342 ESDGREDESGQDEEEWSE 395
>BE021436
Length = 427
Score = 62.4 bits (150), Expect = 4e-10
Identities = 41/136 (30%), Positives = 64/136 (46%), Gaps = 10/136 (7%)
Frame = +2
Query: 165 FEKTLIPKFPDQFQFVKAPNGVSAVRLSKWCEEFAVSALQKSNERDGGDDGYRDFKRGKA 224
F+ L+PK+P QF V+ G ++ L W A++A + ++G + D R K
Sbjct: 5 FKDCLVPKYP-QFFAVRRFRGRDSLALEDWDSTLALTARESRLAQEGVVNLKADGNRRKV 181
Query: 225 AL----------VFPMRFPRGYGAQKKVRFWMDEFHKLPYISPYADSSKIDPNSDLMEKR 274
+ F M FP G+ ++ + KL + SPY ++ + D KR
Sbjct: 182 KISRDGNYLGPFAFKMNFPAGFRPNVGYLEQLERWQKLEFPSPYLNARRFDAADPKARKR 361
Query: 275 VVGVLHELLSLTMHKK 290
V V+HELLSLTM K+
Sbjct: 362 AVAVIHELLSLTMEKR 409
>AW164826
Length = 414
Score = 48.9 bits (115), Expect = 4e-06
Identities = 32/98 (32%), Positives = 49/98 (49%)
Frame = +3
Query: 85 FIRRYPTLFHEFPHPRWPSLPCFRLTDTALLLHSQEQSLHNHHENDTVERLSKFLMMTKT 144
F+ ++P +F F HP L C RLT A+L QE+ V RL K LMM+
Sbjct: 105 FVLKFPHVFEIFEHPVQRILFC-RLTRKAILQIEQERRALAAELPRAVTRLRKLLMMSNH 281
Query: 145 RTVPLVSLYPLKWDIGLPDSFEKTLIPKFPDQFQFVKA 182
+ L + + GLPD FE +++ ++P F+ + A
Sbjct: 282 GRLRLEHVRIARAAYGLPDDFENSVVLRYPQFFRLIDA 395
>TC222129
Length = 1024
Score = 35.4 bits (80), Expect(2) = 2e-05
Identities = 17/31 (54%), Positives = 21/31 (66%)
Frame = +1
Query: 260 DSSKIDPNSDLMEKRVVGVLHELLSLTMHKK 290
D S +D S EKR VGV HEL SL++HK+
Sbjct: 40 DVSDLDQASREKEKRSVGVFHELFSLSLHKR 132
Score = 30.4 bits (67), Expect(2) = 2e-05
Identities = 17/41 (41%), Positives = 23/41 (55%), Gaps = 1/41 (2%)
Frame = +3
Query: 296 LRSLREELNLPHKFTRIFTRYPGIFYLSLK-CKTTTVTLRE 335
L L +E + F+ FTR GIFYLSLK C ++ + E
Sbjct: 111 LTFLAQEDRFSNAFSTTFTRNSGIFYLSLKGCMIVSLKMHE 233
>BQ296834
Length = 386
Score = 39.3 bits (90), Expect = 0.003
Identities = 17/38 (44%), Positives = 26/38 (67%)
Frame = +1
Query: 23 IAKVRLKWVKNRSLDHIIDKETDLKAASLLKDAINRSS 60
+ ++LKWVK+R+LD ++ + DLKAA +L I SS
Sbjct: 241 LVNIKLKWVKDRTLDAVVTGQRDLKAAGILVSIIYSSS 354
>TC224510 similar to UP|Q9FI34 (Q9FI34) Emb|CAB68190.1, partial (4%)
Length = 669
Score = 38.9 bits (89), Expect = 0.004
Identities = 17/38 (44%), Positives = 26/38 (67%)
Frame = +1
Query: 23 IAKVRLKWVKNRSLDHIIDKETDLKAASLLKDAINRSS 60
+ ++LKWVK+R+LD ++ + DLKAA +L I SS
Sbjct: 457 LVNIKLKWVKDRTLDVVVPGQRDLKAARILVSVIYSSS 570
>TC224244 similar to UP|Q6NQB8 (Q6NQB8) At4g08940, partial (16%)
Length = 632
Score = 36.2 bits (82), Expect = 0.028
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Frame = +1
Query: 299 LREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVTLREGY-ARGKLVDPHPLVRHRDKFYH 357
+REE +L ++ + P FYL+ V L++ Y G L++ P V +K Y
Sbjct: 7 VREEFSLTKHTYQMLRKQPRAFYLAGTEMNWGVFLKDSYDGNGVLIEKDPQVVFNEKLYK 186
Query: 358 VMKTGLLYRG-DGSIPKPEGGALLLDEIGDEGSE 390
+ + G D + +P L D+ G+E SE
Sbjct: 187 YAQVDQMEPGCDDGVEEPHLS*LQCDDFGEEKSE 288
>CO984560
Length = 737
Score = 33.1 bits (74), Expect = 0.23
Identities = 25/79 (31%), Positives = 40/79 (49%)
Frame = -3
Query: 239 QKKVRFWMDEFHKLPYISPYADSSKIDPNSDLMEKRVVGVLHELLSLTMHKKTKRNYLRS 298
+KKVRF + E SP D+ ++ +LME R +GV + + M K + L+
Sbjct: 354 KKKVRFVVPE-------SPKIDTGAMEELKELMEAREIGVAYIIGQSYMRAKPGSSMLKK 196
Query: 299 LREELNLPHKFTRIFTRYP 317
L +NL ++F R +R P
Sbjct: 195 L--VINLGYEFLRKNSREP 145
>TC207722 homologue to UP|Q43466 (Q43466) Protein kinase 3 , partial (9%)
Length = 589
Score = 32.0 bits (71), Expect = 0.52
Identities = 18/53 (33%), Positives = 26/53 (48%)
Frame = -1
Query: 67 KSFSGWQKLLGLTVPVLRFIRRYPTLFHEFPHPRWPSLPCFRLTDTALLLHSQ 119
+S W KLLGL VP HE P P +P ++ D+ +L+H+Q
Sbjct: 586 RSMFSWHKLLGLLVP------------HE---PSHPQIPSSQILDSLILIHNQ 473
>TC233170 similar to UP|Q6ZK44 (Q6ZK44) Kelch repeat-containing protein-like,
partial (12%)
Length = 576
Score = 31.6 bits (70), Expect = 0.68
Identities = 15/37 (40%), Positives = 22/37 (58%)
Frame = -2
Query: 367 GDGSIPKPEGGALLLDEIGDEGSEEEEVETSDEFSEG 403
GDG I EGGA +E+GD+G E+ E +++ G
Sbjct: 167 GDGEIVSGEGGA---EEVGDDGEAEKGREAEEDYDFG 66
>BE801809 similar to GP|17221599|dbj GPRI1 {Arabidopsis thaliana}, partial
(8%)
Length = 421
Score = 31.2 bits (69), Expect = 0.89
Identities = 20/81 (24%), Positives = 32/81 (38%), Gaps = 19/81 (23%)
Frame = +3
Query: 98 HPRWPSLPCFRLTDTALLL-------------------HSQEQSLHNHHENDTVERLSKF 138
H W SLPC + T L + H++ + LH HHE + RL
Sbjct: 135 HQPWASLPCHQCTTLDLYMYGGITTWTSLSCTCGLNIHHTRHRRLHGHHEPLRLRRLRTL 314
Query: 139 LMMTKTRTVPLVSLYPLKWDI 159
+ T + L++L L + +
Sbjct: 315 YIGTNINWLTLLTLKILPYSL 377
>BM308634 similar to GP|15912245|gb| AT3g27220/K17E12_4 {Arabidopsis
thaliana}, partial (12%)
Length = 428
Score = 31.2 bits (69), Expect = 0.89
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -1
Query: 367 GDGSIPKPEGGALLLDEIGDEGSEEEEVETSDE 399
GDG I EGGA +E+GDEG E+ ET ++
Sbjct: 149 GDGEIVSGEGGA---EEVGDEGEGEKCRETEED 60
>BI893128
Length = 433
Score = 30.0 bits (66), Expect = 2.0
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +3
Query: 137 KFLMMTKT---RTVPLVSLYPLKWDIGLPDSFEKTLIPK 172
KFLMMT RTVP+ L+P I P F L+PK
Sbjct: 105 KFLMMTSNSSRRTVPMPPLFPPWTPIQSPSMFHWLLMPK 221
>TC225036 similar to UP|O65357 (O65357) Aquaporin 2, partial (92%)
Length = 1610
Score = 30.0 bits (66), Expect = 2.0
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -1
Query: 368 DGSIPKPEGGALLLDEIGDEGSEE 391
DG + + EGG DE+GDEGSEE
Sbjct: 644 DGDVEEEEGG----DELGDEGSEE 585
>TC206922 similar to UP|Q9LYY2 (Q9LYY2) DNAJ protein-like, partial (98%)
Length = 752
Score = 30.0 bits (66), Expect = 2.0
Identities = 14/38 (36%), Positives = 19/38 (49%)
Frame = -2
Query: 91 TLFHEFPHPRWPSLPCFRLTDTALLLHSQEQSLHNHHE 128
T F +F H RWPSL C DT S+ + + H+
Sbjct: 307 TTFIKFTHTRWPSLECLPSLDTISTSISRSRHCNPCHQ 194
>TC207877 weakly similar to UP|Q9FI34 (Q9FI34) Emb|CAB68190.1, partial (8%)
Length = 380
Score = 29.6 bits (65), Expect = 2.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 135 LSKFLMMTKTRTVPLVSLYPLKWDIG 160
L K LM+ R +PL ++ LKWD+G
Sbjct: 47 LCKLLMLASDRILPLQTIDQLKWDLG 124
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.320 0.138 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,772,783
Number of Sequences: 63676
Number of extensions: 304695
Number of successful extensions: 1909
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1895
length of query: 411
length of database: 12,639,632
effective HSP length: 100
effective length of query: 311
effective length of database: 6,272,032
effective search space: 1950601952
effective search space used: 1950601952
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0029a.7