BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0019b.9
(138 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF324739 35 0.015
TC203803 weakly similar to UP|Q7QHT5 (Q7QHT5) AgCP6936, partial ... 33 0.043
TC229059 similar to UP|Q9M451 (Q9M451) Calmodulin-binding protei... 30 0.28
TC204760 UP|143D_SOYBN (Q96453) 14-3-3-like protein D (SGF14D), ... 30 0.48
BG238947 28 1.1
TC222311 similar to UP|Q9FYH7 (Q9FYH7) F17F8.23, partial (21%) 28 1.8
TC216811 similar to UP|WR11_ARATH (Q9SV15) Probable WRKY transcr... 28 1.8
TC221561 homologue to UP|Q9ZPA0 (Q9ZPA0) Inosine monophosphate d... 27 2.4
TC206135 27 2.4
TC234771 similar to GB|AAF75234.1|8453100|AF233752 short-root pr... 27 3.1
TC229128 similar to UP|Q70ZA7 (Q70ZA7) Olfactory receptor (Fragm... 27 3.1
TC220145 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein ... 27 3.1
BU964883 27 3.1
CO979128 27 3.1
AI974073 similar to GP|20197329|gb|A expressed protein {Arabidop... 27 3.1
BU927241 27 4.1
TC223642 UP|MSDA_DROME (Q9VBL6) Accessory gland-specific peptide... 27 4.1
TC228419 similar to PIR|T10690|T10690 serine/threonine-specific ... 27 4.1
TC226008 similar to UP|Q8YPJ4 (Q8YPJ4) 50S ribosomal protein L18... 27 4.1
TC208193 similar to PIR|B86396|B86396 T2P11.11 protein - Arabido... 27 4.1
>BF324739
Length = 418
Score = 34.7 bits (78), Expect = 0.015
Identities = 22/74 (29%), Positives = 32/74 (42%)
Frame = +2
Query: 17 TRQVPEGKLKTHTKPNKNQIQQEIHYAKAPQNRHTPYDLHIGEPQESNAPEPTRNLKYKF 76
TR+ + +L HT P +Q+ H P H P H P +AP PT +L + F
Sbjct: 59 TRRNSDSELSPHTLP----LQRHQHPFTRPHRPHPPKRPHAHAPLRHDAPSPTHHLIHSF 226
Query: 77 LKSLCKPKPITVSS 90
P P++ S
Sbjct: 227 RN---YPSPLSTHS 259
>TC203803 weakly similar to UP|Q7QHT5 (Q7QHT5) AgCP6936, partial (19%)
Length = 766
Score = 33.1 bits (74), Expect = 0.043
Identities = 24/95 (25%), Positives = 41/95 (42%), Gaps = 2/95 (2%)
Frame = +3
Query: 46 PQNRHTPYDLHIGEPQESNAPEPTRNLKYK--FLKSLCKPKPITVSSLTHGSSPTPYSIL 103
P + P + I +P + P PT K+K FLK + KPI V+ P P ++
Sbjct: 42 PVYKPIPKSIPIVKPIPNGKPIPTEEAKFKGFFLKPIPIVKPIPVAKSIPIVKPIPITVY 221
Query: 104 RVFHNSSSPHLQLAQRSIFIEDSPSPNSVKRPNNK 138
+ S + + ++ P P S+ +P +K
Sbjct: 222 KPITKSFPTVKPIPKPIPILKPIPKPISIVKPISK 326
>TC229059 similar to UP|Q9M451 (Q9M451) Calmodulin-binding protein
(Fragment), partial (89%)
Length = 1424
Score = 30.4 bits (67), Expect = 0.28
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = +1
Query: 31 PNKNQIQQEIHYAKAPQNRHTPYDLHIGEPQESN---APEPTRNLKYKFLKSLCKPKPIT 87
P +NQ+ H+A+ P+N + IG PQ S P N Y+ + + I
Sbjct: 496 PLQNQLMSASHHAQLPRNEN---GQTIGPPQSSTHGFEPVSISNPTYRGAEEYFPEEEIR 666
Query: 88 VSSLTHGSSPTPYSILRVFHNSSSPH 113
+ S + +LR+F+ PH
Sbjct: 667 IRSNEMLENNDMQHLLRIFNMGGQPH 744
>TC204760 UP|143D_SOYBN (Q96453) 14-3-3-like protein D (SGF14D), complete
Length = 1227
Score = 29.6 bits (65), Expect = 0.48
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -3
Query: 90 SLTHGSSPTPYSILRVFHNSSSPHLQLAQRSIFIEDSPS 128
S TH S+P SI+ H++SSP LA F SPS
Sbjct: 949 SQTHASNPMEDSIIHRTHSASSPPPSLAVPFTFWASSPS 833
>BG238947
Length = 310
Score = 28.5 bits (62), Expect = 1.1
Identities = 22/64 (34%), Positives = 32/64 (49%)
Frame = +3
Query: 60 PQESNAPEPTRNLKYKFLKSLCKPKPITVSSLTHGSSPTPYSILRVFHNSSSPHLQLAQR 119
P+E+N PT K KP VSS SP+P+S+ R+ +S++ L AQ
Sbjct: 60 PEENNNTTPTIATK--------STKPNLVSS-----SPSPHSLKRISSSSNNALLSKAQS 200
Query: 120 SIFI 123
+I I
Sbjct: 201 TISI 212
>TC222311 similar to UP|Q9FYH7 (Q9FYH7) F17F8.23, partial (21%)
Length = 421
Score = 27.7 bits (60), Expect = 1.8
Identities = 16/54 (29%), Positives = 26/54 (47%), Gaps = 1/54 (1%)
Frame = -1
Query: 29 TKPNKNQIQQEIHYAKAPQNRHTPY-DLHIGEPQESNAPEPTRNLKYKFLKSLC 81
TKP +++ KA N HTP+ LHI P ++ +P+ N+ + C
Sbjct: 241 TKPKNGCSHWQLYEHKAASNFHTPHPSLHI--PLQNPSPDLEHNISHGLYIETC 86
>TC216811 similar to UP|WR11_ARATH (Q9SV15) Probable WRKY transcription
factor 11 (WRKY DNA-binding protein 11), partial (29%)
Length = 686
Score = 27.7 bits (60), Expect = 1.8
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -1
Query: 54 DLHIGEPQESNAPEPTRNLKYKFLKSLCKPKPITVSSLTHGSSPTPYSILRVFHNSSSPH 113
DLH P + P+PT + ++ C P +T++ + GSS + H + H
Sbjct: 416 DLHCNHPHVDSNPKPTPPEMFSCIECRCSPSYVTINIV--GSSGARSTCFLAGHPLTLLH 243
Query: 114 L 114
L
Sbjct: 242 L 240
>TC221561 homologue to UP|Q9ZPA0 (Q9ZPA0) Inosine monophosphate dehydrogenase,
complete
Length = 2001
Score = 27.3 bits (59), Expect = 2.4
Identities = 21/88 (23%), Positives = 35/88 (38%), Gaps = 1/88 (1%)
Frame = -1
Query: 26 KTHTKPNKNQIQQEIHYAKAPQNRHTPYDLHI-GEPQESNAPEPTRNLKYKFLKSLCKPK 84
+T +P+ +Q Q E ++H+P G+P +P T L
Sbjct: 1134 QTPFQPSTHQPQPESDSQPGT*SQHSPQSHQAQGKPSSHTSPSLTDKLS----------S 985
Query: 85 PITVSSLTHGSSPTPYSILRVFHNSSSP 112
P +L H + P+P + +H SSP
Sbjct: 984 PENYPTLQHSTQPSPNAPTSPYHLPSSP 901
>TC206135
Length = 784
Score = 27.3 bits (59), Expect = 2.4
Identities = 21/64 (32%), Positives = 31/64 (47%), Gaps = 3/64 (4%)
Frame = +3
Query: 71 NLKYKFLKSLCKPKPITVSSLTHGSS--PTPYSILRVFHNSSSPHLQLAQRSIFIED-SP 127
N+ + LC +PIT+S L + SS P P L + S+ HL RS+ + + SP
Sbjct: 3 NVSSQITMGLCTVQPITLSKLPNASSFLPKPKPSLPQSYTPSAAHL---SRSVCLRNLSP 173
Query: 128 SPNS 131
S
Sbjct: 174 KATS 185
>TC234771 similar to GB|AAF75234.1|8453100|AF233752 short-root protein
{Arabidopsis thaliana;} , partial (20%)
Length = 753
Score = 26.9 bits (58), Expect = 3.1
Identities = 20/72 (27%), Positives = 29/72 (39%), Gaps = 2/72 (2%)
Frame = +1
Query: 24 KLKTHTKPNKNQIQQEIHYAKAPQNRHTPYDLHIGEPQESNAPEPTRNLKY--KFLKSLC 81
KL H+ + N I E N H H + S++ EP+ + K+ K L+
Sbjct: 157 KLSPHSNNHNNIIADEAAALLDHNNMHRSNHSHTSTSRSSDSSEPSEDGKWAPKLLRECA 336
Query: 82 KPKPITVSSLTH 93
K SS TH
Sbjct: 337 KAISERDSSKTH 372
>TC229128 similar to UP|Q70ZA7 (Q70ZA7) Olfactory receptor (Fragment),
partial (12%)
Length = 1121
Score = 26.9 bits (58), Expect = 3.1
Identities = 13/29 (44%), Positives = 16/29 (54%), Gaps = 1/29 (3%)
Frame = -3
Query: 23 GKL-KTHTKPNKNQIQQEIHYAKAPQNRH 50
GK+ K H K NKNQ + + HY RH
Sbjct: 855 GKISKEHRKENKNQRKNKSHYGCKANERH 769
>TC220145 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein
kinase-like protein (CBL-interacting protein kinase 5),
partial (59%)
Length = 1094
Score = 26.9 bits (58), Expect = 3.1
Identities = 18/55 (32%), Positives = 27/55 (48%), Gaps = 1/55 (1%)
Frame = +3
Query: 46 PQNRHTPYDLHIGEPQESNAPEPTRNLKYKFLKSL-CKPKPITVSSLTHGSSPTP 99
PQ R P + +ES+ T+ LK SL C+ +T+ S TH ++P P
Sbjct: 48 PQQRSIP---P*SQTRESSPRRRTKTLKSPISVSLRCRNSFVTMGSSTHSAAPLP 203
>BU964883
Length = 450
Score = 26.9 bits (58), Expect = 3.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 13 SSLETRQVPEGKLKTHTKPNKNQIQQ 38
+S++ R + EGKL H KPN+ Q+
Sbjct: 182 ASMKKRLISEGKLDKHGKPNEKTPQE 259
>CO979128
Length = 750
Score = 26.9 bits (58), Expect = 3.1
Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = -3
Query: 59 EPQESNAPEPTRNLKYKFLKSLCKPKPITVSSLTHGSSP-TPYSILRVFHNSSSPHLQLA 117
EPQ N PT + S + K + L P PY++ + S+P + A
Sbjct: 421 EPQAENPSSPTSS------SSSQQQKEVAEEELGSSQVPKAPYTVAGLSSQKSNPIPETA 260
Query: 118 QRSIFIEDSPSPNSVKRPNN 137
+S+ ED P P++
Sbjct: 259 NQSVPEEDEPMQIEAAAPSS 200
>AI974073 similar to GP|20197329|gb|A expressed protein {Arabidopsis
thaliana}, partial (97%)
Length = 283
Score = 26.9 bits (58), Expect = 3.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -3
Query: 6 PTVNKFTSSLETRQVPEGKLKTHTKPNKNQIQQEIHYAKAP 46
PT++ ++E R+ + K + KPN Q E+H P
Sbjct: 137 PTIHTIRPTIERRRERKAKGRPSRKPNDLQSPSELHIPSLP 15
>BU927241
Length = 432
Score = 26.6 bits (57), Expect = 4.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 95 SSPTPYSILRVFHNSSSPHLQLAQRSIFIEDSPSPNSV 132
S TP+S LR+F S+PH +A + SP+ +
Sbjct: 63 SRVTPHSTLRIFIRISTPHRPMADSDLSSPLLSSPDHI 176
>TC223642 UP|MSDA_DROME (Q9VBL6) Accessory gland-specific peptide 57Da
precursor (Male accessory gland secretory protein 57Da),
partial (13%)
Length = 436
Score = 26.6 bits (57), Expect = 4.1
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -1
Query: 35 QIQQEIHYAKAPQNRHTPYDLHIGEPQESNAPEPTRNLKYKFLKSLCKP 83
Q QQ++H + PQ+ H P +G + A R L+ + C+P
Sbjct: 310 QQQQQLHLLQHPQSNH*PNHSALGTSEPRIA*Y*KRQLQTRIESQTCQP 164
>TC228419 similar to PIR|T10690|T10690 serine/threonine-specific protein
kinase homolog T16I18.40 - Arabidopsis thaliana
{Arabidopsis thaliana;} , partial (69%)
Length = 775
Score = 26.6 bits (57), Expect = 4.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 25 LKTHTKPNKNQIQQEIHYAKAPQNRHTPYDLHIGEP 60
+ T T+P +++ E+ + A Q R T D IG+P
Sbjct: 65 IATETQPQQHKDSSEVSGSAAEQRRWTLNDFDIGKP 172
>TC226008 similar to UP|Q8YPJ4 (Q8YPJ4) 50S ribosomal protein L18, partial
(78%)
Length = 794
Score = 26.6 bits (57), Expect = 4.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 98 TPYSILRVFHNSSSPHLQLAQR 119
T Y+ + FH SSPHL L +R
Sbjct: 121 TDYTTVSTFHGLSSPHLILRER 56
>TC208193 similar to PIR|B86396|B86396 T2P11.11 protein - Arabidopsis
thaliana {Arabidopsis thaliana;} , partial (21%)
Length = 415
Score = 26.6 bits (57), Expect = 4.1
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 12 TSSLETRQVPEGKLKTHTKPNKNQIQQEIHYAKAPQNRHTPYDLHIGEPQESNAPEPTRN 71
++ +E R VP+ + T +K+ ++ RH PY+ HI ES + T++
Sbjct: 1 SNKMEERVVPKRPREEETLEHKDASLDSYELLESSSKRHMPYN-HILSLLESEEEDSTQD 177
Query: 72 L 72
L
Sbjct: 178L 180
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.311 0.128 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,409,573
Number of Sequences: 63676
Number of extensions: 135409
Number of successful extensions: 642
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of query: 138
length of database: 12,639,632
effective HSP length: 87
effective length of query: 51
effective length of database: 7,099,820
effective search space: 362090820
effective search space used: 362090820
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 54 (25.4 bits)
Lotus: description of TM0019b.9