Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0019b.9
         (138 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BF324739                                                               35  0.015
TC203803 weakly similar to UP|Q7QHT5 (Q7QHT5) AgCP6936, partial ...    33  0.043
TC229059 similar to UP|Q9M451 (Q9M451) Calmodulin-binding protei...    30  0.28
TC204760 UP|143D_SOYBN (Q96453) 14-3-3-like protein D (SGF14D), ...    30  0.48
BG238947                                                               28  1.1
TC222311 similar to UP|Q9FYH7 (Q9FYH7) F17F8.23, partial (21%)         28  1.8
TC216811 similar to UP|WR11_ARATH (Q9SV15) Probable WRKY transcr...    28  1.8
TC221561 homologue to UP|Q9ZPA0 (Q9ZPA0) Inosine monophosphate d...    27  2.4
TC206135                                                               27  2.4
TC234771 similar to GB|AAF75234.1|8453100|AF233752 short-root pr...    27  3.1
TC229128 similar to UP|Q70ZA7 (Q70ZA7) Olfactory receptor (Fragm...    27  3.1
TC220145 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein ...    27  3.1
BU964883                                                               27  3.1
CO979128                                                               27  3.1
AI974073 similar to GP|20197329|gb|A expressed protein {Arabidop...    27  3.1
BU927241                                                               27  4.1
TC223642 UP|MSDA_DROME (Q9VBL6) Accessory gland-specific peptide...    27  4.1
TC228419 similar to PIR|T10690|T10690 serine/threonine-specific ...    27  4.1
TC226008 similar to UP|Q8YPJ4 (Q8YPJ4) 50S ribosomal protein L18...    27  4.1
TC208193 similar to PIR|B86396|B86396 T2P11.11 protein - Arabido...    27  4.1

>BF324739 
          Length = 418

 Score = 34.7 bits (78), Expect = 0.015
 Identities = 22/74 (29%), Positives = 32/74 (42%)
 Frame = +2

Query: 17  TRQVPEGKLKTHTKPNKNQIQQEIHYAKAPQNRHTPYDLHIGEPQESNAPEPTRNLKYKF 76
           TR+  + +L  HT P    +Q+  H    P   H P   H   P   +AP PT +L + F
Sbjct: 59  TRRNSDSELSPHTLP----LQRHQHPFTRPHRPHPPKRPHAHAPLRHDAPSPTHHLIHSF 226

Query: 77  LKSLCKPKPITVSS 90
                 P P++  S
Sbjct: 227 RN---YPSPLSTHS 259


>TC203803 weakly similar to UP|Q7QHT5 (Q7QHT5) AgCP6936, partial (19%)
          Length = 766

 Score = 33.1 bits (74), Expect = 0.043
 Identities = 24/95 (25%), Positives = 41/95 (42%), Gaps = 2/95 (2%)
 Frame = +3

Query: 46  PQNRHTPYDLHIGEPQESNAPEPTRNLKYK--FLKSLCKPKPITVSSLTHGSSPTPYSIL 103
           P  +  P  + I +P  +  P PT   K+K  FLK +   KPI V+       P P ++ 
Sbjct: 42  PVYKPIPKSIPIVKPIPNGKPIPTEEAKFKGFFLKPIPIVKPIPVAKSIPIVKPIPITVY 221

Query: 104 RVFHNSSSPHLQLAQRSIFIEDSPSPNSVKRPNNK 138
           +    S      + +    ++  P P S+ +P +K
Sbjct: 222 KPITKSFPTVKPIPKPIPILKPIPKPISIVKPISK 326


>TC229059 similar to UP|Q9M451 (Q9M451) Calmodulin-binding protein
           (Fragment), partial (89%)
          Length = 1424

 Score = 30.4 bits (67), Expect = 0.28
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
 Frame = +1

Query: 31  PNKNQIQQEIHYAKAPQNRHTPYDLHIGEPQESN---APEPTRNLKYKFLKSLCKPKPIT 87
           P +NQ+    H+A+ P+N +      IG PQ S     P    N  Y+  +     + I 
Sbjct: 496 PLQNQLMSASHHAQLPRNEN---GQTIGPPQSSTHGFEPVSISNPTYRGAEEYFPEEEIR 666

Query: 88  VSSLTHGSSPTPYSILRVFHNSSSPH 113
           + S     +     +LR+F+    PH
Sbjct: 667 IRSNEMLENNDMQHLLRIFNMGGQPH 744


>TC204760 UP|143D_SOYBN (Q96453) 14-3-3-like protein D (SGF14D), complete
          Length = 1227

 Score = 29.6 bits (65), Expect = 0.48
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -3

Query: 90  SLTHGSSPTPYSILRVFHNSSSPHLQLAQRSIFIEDSPS 128
           S TH S+P   SI+   H++SSP   LA    F   SPS
Sbjct: 949 SQTHASNPMEDSIIHRTHSASSPPPSLAVPFTFWASSPS 833


>BG238947 
          Length = 310

 Score = 28.5 bits (62), Expect = 1.1
 Identities = 22/64 (34%), Positives = 32/64 (49%)
 Frame = +3

Query: 60  PQESNAPEPTRNLKYKFLKSLCKPKPITVSSLTHGSSPTPYSILRVFHNSSSPHLQLAQR 119
           P+E+N   PT   K          KP  VSS     SP+P+S+ R+  +S++  L  AQ 
Sbjct: 60  PEENNNTTPTIATK--------STKPNLVSS-----SPSPHSLKRISSSSNNALLSKAQS 200

Query: 120 SIFI 123
           +I I
Sbjct: 201 TISI 212


>TC222311 similar to UP|Q9FYH7 (Q9FYH7) F17F8.23, partial (21%)
          Length = 421

 Score = 27.7 bits (60), Expect = 1.8
 Identities = 16/54 (29%), Positives = 26/54 (47%), Gaps = 1/54 (1%)
 Frame = -1

Query: 29  TKPNKNQIQQEIHYAKAPQNRHTPY-DLHIGEPQESNAPEPTRNLKYKFLKSLC 81
           TKP       +++  KA  N HTP+  LHI  P ++ +P+   N+ +      C
Sbjct: 241 TKPKNGCSHWQLYEHKAASNFHTPHPSLHI--PLQNPSPDLEHNISHGLYIETC 86


>TC216811 similar to UP|WR11_ARATH (Q9SV15) Probable WRKY transcription
           factor 11 (WRKY DNA-binding protein 11), partial (29%)
          Length = 686

 Score = 27.7 bits (60), Expect = 1.8
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = -1

Query: 54  DLHIGEPQESNAPEPTRNLKYKFLKSLCKPKPITVSSLTHGSSPTPYSILRVFHNSSSPH 113
           DLH   P   + P+PT    +  ++  C P  +T++ +  GSS    +     H  +  H
Sbjct: 416 DLHCNHPHVDSNPKPTPPEMFSCIECRCSPSYVTINIV--GSSGARSTCFLAGHPLTLLH 243

Query: 114 L 114
           L
Sbjct: 242 L 240


>TC221561 homologue to UP|Q9ZPA0 (Q9ZPA0) Inosine monophosphate dehydrogenase,
            complete
          Length = 2001

 Score = 27.3 bits (59), Expect = 2.4
 Identities = 21/88 (23%), Positives = 35/88 (38%), Gaps = 1/88 (1%)
 Frame = -1

Query: 26   KTHTKPNKNQIQQEIHYAKAPQNRHTPYDLHI-GEPQESNAPEPTRNLKYKFLKSLCKPK 84
            +T  +P+ +Q Q E        ++H+P      G+P    +P  T  L            
Sbjct: 1134 QTPFQPSTHQPQPESDSQPGT*SQHSPQSHQAQGKPSSHTSPSLTDKLS----------S 985

Query: 85   PITVSSLTHGSSPTPYSILRVFHNSSSP 112
            P    +L H + P+P +    +H  SSP
Sbjct: 984  PENYPTLQHSTQPSPNAPTSPYHLPSSP 901


>TC206135 
          Length = 784

 Score = 27.3 bits (59), Expect = 2.4
 Identities = 21/64 (32%), Positives = 31/64 (47%), Gaps = 3/64 (4%)
 Frame = +3

Query: 71  NLKYKFLKSLCKPKPITVSSLTHGSS--PTPYSILRVFHNSSSPHLQLAQRSIFIED-SP 127
           N+  +    LC  +PIT+S L + SS  P P   L   +  S+ HL    RS+ + + SP
Sbjct: 3   NVSSQITMGLCTVQPITLSKLPNASSFLPKPKPSLPQSYTPSAAHL---SRSVCLRNLSP 173

Query: 128 SPNS 131
              S
Sbjct: 174 KATS 185


>TC234771 similar to GB|AAF75234.1|8453100|AF233752 short-root protein
           {Arabidopsis thaliana;} , partial (20%)
          Length = 753

 Score = 26.9 bits (58), Expect = 3.1
 Identities = 20/72 (27%), Positives = 29/72 (39%), Gaps = 2/72 (2%)
 Frame = +1

Query: 24  KLKTHTKPNKNQIQQEIHYAKAPQNRHTPYDLHIGEPQESNAPEPTRNLKY--KFLKSLC 81
           KL  H+  + N I  E        N H     H    + S++ EP+ + K+  K L+   
Sbjct: 157 KLSPHSNNHNNIIADEAAALLDHNNMHRSNHSHTSTSRSSDSSEPSEDGKWAPKLLRECA 336

Query: 82  KPKPITVSSLTH 93
           K      SS TH
Sbjct: 337 KAISERDSSKTH 372


>TC229128 similar to UP|Q70ZA7 (Q70ZA7) Olfactory receptor (Fragment),
           partial (12%)
          Length = 1121

 Score = 26.9 bits (58), Expect = 3.1
 Identities = 13/29 (44%), Positives = 16/29 (54%), Gaps = 1/29 (3%)
 Frame = -3

Query: 23  GKL-KTHTKPNKNQIQQEIHYAKAPQNRH 50
           GK+ K H K NKNQ + + HY      RH
Sbjct: 855 GKISKEHRKENKNQRKNKSHYGCKANERH 769


>TC220145 similar to UP|Q9LEU7 (Q9LEU7) Serine/threonine protein
          kinase-like protein (CBL-interacting protein kinase 5),
          partial (59%)
          Length = 1094

 Score = 26.9 bits (58), Expect = 3.1
 Identities = 18/55 (32%), Positives = 27/55 (48%), Gaps = 1/55 (1%)
 Frame = +3

Query: 46 PQNRHTPYDLHIGEPQESNAPEPTRNLKYKFLKSL-CKPKPITVSSLTHGSSPTP 99
          PQ R  P      + +ES+    T+ LK     SL C+   +T+ S TH ++P P
Sbjct: 48 PQQRSIP---P*SQTRESSPRRRTKTLKSPISVSLRCRNSFVTMGSSTHSAAPLP 203


>BU964883 
          Length = 450

 Score = 26.9 bits (58), Expect = 3.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 13  SSLETRQVPEGKLKTHTKPNKNQIQQ 38
           +S++ R + EGKL  H KPN+   Q+
Sbjct: 182 ASMKKRLISEGKLDKHGKPNEKTPQE 259


>CO979128 
          Length = 750

 Score = 26.9 bits (58), Expect = 3.1
 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
 Frame = -3

Query: 59  EPQESNAPEPTRNLKYKFLKSLCKPKPITVSSLTHGSSP-TPYSILRVFHNSSSPHLQLA 117
           EPQ  N   PT +       S  + K +    L     P  PY++  +    S+P  + A
Sbjct: 421 EPQAENPSSPTSS------SSSQQQKEVAEEELGSSQVPKAPYTVAGLSSQKSNPIPETA 260

Query: 118 QRSIFIEDSPSPNSVKRPNN 137
            +S+  ED P       P++
Sbjct: 259 NQSVPEEDEPMQIEAAAPSS 200


>AI974073 similar to GP|20197329|gb|A expressed protein {Arabidopsis
           thaliana}, partial (97%)
          Length = 283

 Score = 26.9 bits (58), Expect = 3.1
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -3

Query: 6   PTVNKFTSSLETRQVPEGKLKTHTKPNKNQIQQEIHYAKAP 46
           PT++    ++E R+  + K +   KPN  Q   E+H    P
Sbjct: 137 PTIHTIRPTIERRRERKAKGRPSRKPNDLQSPSELHIPSLP 15


>BU927241 
          Length = 432

 Score = 26.6 bits (57), Expect = 4.1
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 95  SSPTPYSILRVFHNSSSPHLQLAQRSIFIEDSPSPNSV 132
           S  TP+S LR+F   S+PH  +A   +      SP+ +
Sbjct: 63  SRVTPHSTLRIFIRISTPHRPMADSDLSSPLLSSPDHI 176


>TC223642 UP|MSDA_DROME (Q9VBL6) Accessory gland-specific peptide 57Da
           precursor (Male accessory gland secretory protein 57Da),
           partial (13%)
          Length = 436

 Score = 26.6 bits (57), Expect = 4.1
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = -1

Query: 35  QIQQEIHYAKAPQNRHTPYDLHIGEPQESNAPEPTRNLKYKFLKSLCKP 83
           Q QQ++H  + PQ+ H P    +G  +   A    R L+ +     C+P
Sbjct: 310 QQQQQLHLLQHPQSNH*PNHSALGTSEPRIA*Y*KRQLQTRIESQTCQP 164


>TC228419 similar to PIR|T10690|T10690 serine/threonine-specific protein
           kinase homolog T16I18.40 - Arabidopsis thaliana
           {Arabidopsis thaliana;} , partial (69%)
          Length = 775

 Score = 26.6 bits (57), Expect = 4.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 25  LKTHTKPNKNQIQQEIHYAKAPQNRHTPYDLHIGEP 60
           + T T+P +++   E+  + A Q R T  D  IG+P
Sbjct: 65  IATETQPQQHKDSSEVSGSAAEQRRWTLNDFDIGKP 172


>TC226008 similar to UP|Q8YPJ4 (Q8YPJ4) 50S ribosomal protein L18, partial
           (78%)
          Length = 794

 Score = 26.6 bits (57), Expect = 4.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 98  TPYSILRVFHNSSSPHLQLAQR 119
           T Y+ +  FH  SSPHL L +R
Sbjct: 121 TDYTTVSTFHGLSSPHLILRER 56


>TC208193 similar to PIR|B86396|B86396 T2P11.11 protein - Arabidopsis
          thaliana {Arabidopsis thaliana;} , partial (21%)
          Length = 415

 Score = 26.6 bits (57), Expect = 4.1
 Identities = 16/61 (26%), Positives = 29/61 (47%)
 Frame = +1

Query: 12 TSSLETRQVPEGKLKTHTKPNKNQIQQEIHYAKAPQNRHTPYDLHIGEPQESNAPEPTRN 71
          ++ +E R VP+   +  T  +K+         ++   RH PY+ HI    ES   + T++
Sbjct: 1  SNKMEERVVPKRPREEETLEHKDASLDSYELLESSSKRHMPYN-HILSLLESEEEDSTQD 177

Query: 72 L 72
          L
Sbjct: 178L 180


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.311    0.128    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,409,573
Number of Sequences: 63676
Number of extensions: 135409
Number of successful extensions: 642
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of query: 138
length of database: 12,639,632
effective HSP length: 87
effective length of query: 51
effective length of database: 7,099,820
effective search space: 362090820
effective search space used: 362090820
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 54 (25.4 bits)


Lotus: description of TM0019b.9