
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0016.9
(219 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CA936755 68 3e-12
BM270059 30 1.1
TC232603 weakly similar to UP|Q39482 (Q39482) Legumin (Fragment)... 28 3.3
TC220999 similar to UP|Q9FUL6 (Q9FUL6) Diacylglycerol acyltransf... 28 3.3
BG315562 similar to GP|6561816|gb|A aspartyl protease 3 {Homo sa... 28 4.3
TC231740 acyl CoA:diacylglycerol acyltransferase [Glycine max] 28 4.3
TC206521 homologue to UP|Q9V725 (Q9V725) CG10109-PA (LOBE) (RE53... 28 4.3
TC206107 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-in... 27 9.5
TC206105 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-in... 27 9.5
>CA936755
Length = 424
Score = 68.2 bits (165), Expect = 3e-12
Identities = 29/91 (31%), Positives = 51/91 (55%)
Frame = -2
Query: 61 DRWLVNDEAILQFDGATQSADHRPVSLALGSHDFGPKPFCFFNYWLMEDGFKKMVEEWWS 120
++WL++ Q+ +DH P+ + D+GPKPF ++WL + G++++V E WS
Sbjct: 282 EQWLLSWPDSSQYTLPRDFSDHCPIIMQTKKVDWGPKPFRVVDWWLHQKGYQRLVRETWS 103
Query: 121 SAVVEGWSNFALMQKLKGLKVKIREWKENRG 151
+ GW L KL+ LK+ I++W + G
Sbjct: 102 AEQQPGWGGILLKNKLRMLKLSIKQWSKEYG 10
>BM270059
Length = 413
Score = 29.6 bits (65), Expect = 1.1
Identities = 12/38 (31%), Positives = 21/38 (54%)
Frame = +2
Query: 110 GFKKMVEEWWSSAVVEGWSNFALMQKLKGLKVKIREWK 147
GF+ ++WWSS GW+ + L G K+++W+
Sbjct: 230 GFQMHKKQWWSSTTNFGWNYPHISHSLHG---KVKQWE 334
>TC232603 weakly similar to UP|Q39482 (Q39482) Legumin (Fragment), partial
(4%)
Length = 1123
Score = 28.1 bits (61), Expect = 3.3
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 1 IGGDFNAILNDGERKGLNSN 20
I GDFNA+ ++ ERKG+ +N
Sbjct: 436 IVGDFNAVCSEEERKGVETN 495
>TC220999 similar to UP|Q9FUL6 (Q9FUL6) Diacylglycerol acyltransferase,
partial (26%)
Length = 589
Score = 28.1 bits (61), Expect = 3.3
Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
Frame = +1
Query: 99 FCFFNYWL------MEDGFKKMVEEWWSSAVVE 125
+CFF+ WL + G ++ ++WW++ VE
Sbjct: 352 YCFFHLWLNILAELLRFGDREFYKDWWNAKTVE 450
>BG315562 similar to GP|6561816|gb|A aspartyl protease 3 {Homo sapiens},
partial (2%)
Length = 168
Score = 27.7 bits (60), Expect = 4.3
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 84 PVSLALGSHDFGPKPFCF 101
P++LA G+H GP PFCF
Sbjct: 107 PINLACGAHK-GPAPFCF 157
>TC231740 acyl CoA:diacylglycerol acyltransferase [Glycine max]
Length = 1713
Score = 27.7 bits (60), Expect = 4.3
Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
Frame = +1
Query: 99 FCFFNYWL------MEDGFKKMVEEWWSSAVVE 125
+CFF+ WL + G ++ ++WW++ VE
Sbjct: 1039 YCFFHLWLNILAELVRFGDREFYKDWWNAKTVE 1137
>TC206521 homologue to UP|Q9V725 (Q9V725) CG10109-PA (LOBE) (RE53130p),
partial (4%)
Length = 1431
Score = 27.7 bits (60), Expect = 4.3
Identities = 19/92 (20%), Positives = 39/92 (41%)
Frame = +1
Query: 59 KIDRWLVNDEAILQFDGATQSADHRPVSLALGSHDFGPKPFCFFNYWLMEDGFKKMVEEW 118
+++ W V + ++ +G + S D R P Y M +KM + W
Sbjct: 703 QVNAWPVQESFVIPIEGGSSSIDPR-------------SPTPRKTYAFMSQDAEKMPQLW 843
Query: 119 WSSAVVEGWSNFALMQKLKGLKVKIREWKENR 150
S A GW +Q+ + LK++ ++ ++ +
Sbjct: 844 QSHAFYSGWGGD--LQQQQQLKLQQQQQQQQQ 933
>TC206107 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-infected
erythrocyte surface antigen, partial (4%)
Length = 650
Score = 26.6 bits (57), Expect = 9.5
Identities = 17/58 (29%), Positives = 32/58 (54%), Gaps = 3/58 (5%)
Frame = -3
Query: 98 PFCFFNYWLMEDGFKKMVEEWWSSA---VVEGWSNFALMQKLKGLKVKIREWKENRGI 152
PFC FN+ L+ + ++ W S+ VVE + N L++ +KG +++ E + G+
Sbjct: 471 PFCHFNFLLLLCCWFLLLRFWLGSS*LMVVERFLN-KLLELIKGFLLRLGEVANHVGL 301
>TC206105 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-infected
erythrocyte surface antigen, partial (5%)
Length = 858
Score = 26.6 bits (57), Expect = 9.5
Identities = 17/58 (29%), Positives = 32/58 (54%), Gaps = 3/58 (5%)
Frame = -1
Query: 98 PFCFFNYWLMEDGFKKMVEEWWSSA---VVEGWSNFALMQKLKGLKVKIREWKENRGI 152
PFC FN+ L+ + ++ W S+ VVE + N L++ +KG +++ E + G+
Sbjct: 426 PFCHFNFLLLLCCWFLLLRFWLGSS*LMVVERFLN-KLLELIKGFLLRLGEVANHVGL 256
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.329 0.145 0.479
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,523,955
Number of Sequences: 63676
Number of extensions: 155491
Number of successful extensions: 945
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of query: 219
length of database: 12,639,632
effective HSP length: 93
effective length of query: 126
effective length of database: 6,717,764
effective search space: 846438264
effective search space used: 846438264
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 57 (26.6 bits)
Lotus: description of TM0016.9