Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0016.9
         (219 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CA936755                                                               68  3e-12
BM270059                                                               30  1.1
TC232603 weakly similar to UP|Q39482 (Q39482) Legumin (Fragment)...    28  3.3
TC220999 similar to UP|Q9FUL6 (Q9FUL6) Diacylglycerol acyltransf...    28  3.3
BG315562 similar to GP|6561816|gb|A aspartyl protease 3 {Homo sa...    28  4.3
TC231740 acyl CoA:diacylglycerol acyltransferase [Glycine max]         28  4.3
TC206521 homologue to UP|Q9V725 (Q9V725) CG10109-PA (LOBE) (RE53...    28  4.3
TC206107 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-in...    27  9.5
TC206105 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-in...    27  9.5

>CA936755 
          Length = 424

 Score = 68.2 bits (165), Expect = 3e-12
 Identities = 29/91 (31%), Positives = 51/91 (55%)
 Frame = -2

Query: 61  DRWLVNDEAILQFDGATQSADHRPVSLALGSHDFGPKPFCFFNYWLMEDGFKKMVEEWWS 120
           ++WL++     Q+      +DH P+ +     D+GPKPF   ++WL + G++++V E WS
Sbjct: 282 EQWLLSWPDSSQYTLPRDFSDHCPIIMQTKKVDWGPKPFRVVDWWLHQKGYQRLVRETWS 103

Query: 121 SAVVEGWSNFALMQKLKGLKVKIREWKENRG 151
           +    GW    L  KL+ LK+ I++W +  G
Sbjct: 102 AEQQPGWGGILLKNKLRMLKLSIKQWSKEYG 10


>BM270059 
          Length = 413

 Score = 29.6 bits (65), Expect = 1.1
 Identities = 12/38 (31%), Positives = 21/38 (54%)
 Frame = +2

Query: 110 GFKKMVEEWWSSAVVEGWSNFALMQKLKGLKVKIREWK 147
           GF+   ++WWSS    GW+   +   L G   K+++W+
Sbjct: 230 GFQMHKKQWWSSTTNFGWNYPHISHSLHG---KVKQWE 334


>TC232603 weakly similar to UP|Q39482 (Q39482) Legumin (Fragment), partial
           (4%)
          Length = 1123

 Score = 28.1 bits (61), Expect = 3.3
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +1

Query: 1   IGGDFNAILNDGERKGLNSN 20
           I GDFNA+ ++ ERKG+ +N
Sbjct: 436 IVGDFNAVCSEEERKGVETN 495


>TC220999 similar to UP|Q9FUL6 (Q9FUL6) Diacylglycerol acyltransferase,
           partial (26%)
          Length = 589

 Score = 28.1 bits (61), Expect = 3.3
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
 Frame = +1

Query: 99  FCFFNYWL------MEDGFKKMVEEWWSSAVVE 125
           +CFF+ WL      +  G ++  ++WW++  VE
Sbjct: 352 YCFFHLWLNILAELLRFGDREFYKDWWNAKTVE 450


>BG315562 similar to GP|6561816|gb|A aspartyl protease 3 {Homo sapiens},
           partial (2%)
          Length = 168

 Score = 27.7 bits (60), Expect = 4.3
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +2

Query: 84  PVSLALGSHDFGPKPFCF 101
           P++LA G+H  GP PFCF
Sbjct: 107 PINLACGAHK-GPAPFCF 157


>TC231740 acyl CoA:diacylglycerol acyltransferase [Glycine max]
          Length = 1713

 Score = 27.7 bits (60), Expect = 4.3
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
 Frame = +1

Query: 99   FCFFNYWL------MEDGFKKMVEEWWSSAVVE 125
            +CFF+ WL      +  G ++  ++WW++  VE
Sbjct: 1039 YCFFHLWLNILAELVRFGDREFYKDWWNAKTVE 1137


>TC206521 homologue to UP|Q9V725 (Q9V725) CG10109-PA (LOBE) (RE53130p),
           partial (4%)
          Length = 1431

 Score = 27.7 bits (60), Expect = 4.3
 Identities = 19/92 (20%), Positives = 39/92 (41%)
 Frame = +1

Query: 59  KIDRWLVNDEAILQFDGATQSADHRPVSLALGSHDFGPKPFCFFNYWLMEDGFKKMVEEW 118
           +++ W V +  ++  +G + S D R              P     Y  M    +KM + W
Sbjct: 703 QVNAWPVQESFVIPIEGGSSSIDPR-------------SPTPRKTYAFMSQDAEKMPQLW 843

Query: 119 WSSAVVEGWSNFALMQKLKGLKVKIREWKENR 150
            S A   GW     +Q+ + LK++ ++ ++ +
Sbjct: 844 QSHAFYSGWGGD--LQQQQQLKLQQQQQQQQQ 933


>TC206107 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-infected
           erythrocyte surface antigen, partial (4%)
          Length = 650

 Score = 26.6 bits (57), Expect = 9.5
 Identities = 17/58 (29%), Positives = 32/58 (54%), Gaps = 3/58 (5%)
 Frame = -3

Query: 98  PFCFFNYWLMEDGFKKMVEEWWSSA---VVEGWSNFALMQKLKGLKVKIREWKENRGI 152
           PFC FN+ L+   +  ++  W  S+   VVE + N  L++ +KG  +++ E   + G+
Sbjct: 471 PFCHFNFLLLLCCWFLLLRFWLGSS*LMVVERFLN-KLLELIKGFLLRLGEVANHVGL 301


>TC206105 weakly similar to UP|Q7RH28 (Q7RH28) Mature-parasite-infected
           erythrocyte surface antigen, partial (5%)
          Length = 858

 Score = 26.6 bits (57), Expect = 9.5
 Identities = 17/58 (29%), Positives = 32/58 (54%), Gaps = 3/58 (5%)
 Frame = -1

Query: 98  PFCFFNYWLMEDGFKKMVEEWWSSA---VVEGWSNFALMQKLKGLKVKIREWKENRGI 152
           PFC FN+ L+   +  ++  W  S+   VVE + N  L++ +KG  +++ E   + G+
Sbjct: 426 PFCHFNFLLLLCCWFLLLRFWLGSS*LMVVERFLN-KLLELIKGFLLRLGEVANHVGL 256


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.329    0.145    0.479 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,523,955
Number of Sequences: 63676
Number of extensions: 155491
Number of successful extensions: 945
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of query: 219
length of database: 12,639,632
effective HSP length: 93
effective length of query: 126
effective length of database: 6,717,764
effective search space: 846438264
effective search space used: 846438264
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 57 (26.6 bits)


Lotus: description of TM0016.9