BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0012c.2
(207 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC216737 homologue to UP|Q8GZD2 (Q8GZD2) Expansin, partial (97%) 299 7e-82
TC225350 similar to UP|Q84UK4 (Q84UK4) Expansin, partial (95%) 295 1e-80
TC225355 homologue to UP|Q6T5H7 (Q6T5H7) Alpha-expansin 1, parti... 291 1e-79
TC219719 homologue to UP|Q8GZD2 (Q8GZD2) Expansin, partial (97%) 182 1e-77
TC204261 similar to UP|Q84L76 (Q84L76) Expansin precursor, parti... 202 6e-75
TC226245 homologue to UP|Q9FNT0 (Q9FNT0) Expansin, partial (92%) 275 8e-75
TC226247 similar to UP|Q9FNT0 (Q9FNT0) Expansin, partial (93%) 275 1e-74
TC206527 homologue to UP|Q84L80 (Q84L80) Expansin precursor, par... 274 2e-74
TC215588 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, complete 266 6e-72
TC215587 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, complete 265 1e-71
TC226244 similar to UP|Q9FNT0 (Q9FNT0) Expansin, partial (97%) 263 4e-71
TC227656 homologue to UP|Q9FNT1 (Q9FNT1) Expansin, partial (89%) 250 4e-67
TC207122 homologue to UP|Q9FNT1 (Q9FNT1) Expansin, partial (87%) 246 7e-66
TC206297 UP|Q8GZD3 (Q8GZD3) Expansin, complete 235 1e-62
TC230075 similar to UP|Q6T5H6 (Q6T5H6) Alpha-expansin 2, partial... 197 2e-51
TC230679 similar to UP|EX13_ARATH (Q9M9P0) Alpha-expansin 13 pre... 187 2e-48
TC235178 similar to UP|EXP7_ARATH (Q9LN94) Alpha-expansin 7 prec... 180 5e-46
TC230074 similar to UP|Q84L36 (Q84L36) Cell wall protein Exp1 pr... 173 3e-45
TC215589 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, parti... 156 7e-39
TC230680 similar to UP|EX13_ARATH (Q9M9P0) Alpha-expansin 13 pre... 154 4e-38
>TC216737 homologue to UP|Q8GZD2 (Q8GZD2) Expansin, partial (97%)
Length = 1296
Score = 299 bits (765), Expect = 7e-82
Identities = 132/207 (63%), Positives = 159/207 (76%)
Frame = +1
Query: 1 GACGYEDVVKDGYGLDTAAVSSVLFQEGKICGACFEIKCVNSPQWCIPGQPSITVTATNL 60
GACGY ++ GYG++TAA+S+ LF G CGACFEIKC P+WC PG PSI +TATN
Sbjct: 196 GACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCDQDPRWCNPGNPSILITATNF 375
Query: 61 CPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRVPCARKGGIRFTVT 120
CPPN+A NDNGGWCNPPR HFDLA P +LKIA+Y+ GIVPV YRRVPC + GGIRFT+
Sbjct: 376 CPPNFALPNDNGGWCNPPRPHFDLAMPMFLKIAQYRAGIVPVAYRRVPCRKAGGIRFTIN 555
Query: 121 GNPYFNLVKVWNVGGAGDITQLQVKGDKKLKWTDLKRNWGEKWETNAMLVGESLTFRVRA 180
G YFNLV + NV GAGDI ++ VKG K W + RNWG+ W++NA+LVG++L+FRV
Sbjct: 556 GFRYFNLVLITNVAGAGDIVRVSVKG-SKTAWMSMSRNWGQNWQSNAVLVGQALSFRVTG 732
Query: 181 SDGRYSTAWKVAPKDWQFGQTFEGKNF 207
SD R ST+W VAP +WQFGQTF GKNF
Sbjct: 733 SDRRTSTSWNVAPPNWQFGQTFTGKNF 813
>TC225350 similar to UP|Q84UK4 (Q84UK4) Expansin, partial (95%)
Length = 1184
Score = 295 bits (754), Expect = 1e-80
Identities = 133/207 (64%), Positives = 157/207 (75%)
Frame = +3
Query: 1 GACGYEDVVKDGYGLDTAAVSSVLFQEGKICGACFEIKCVNSPQWCIPGQPSITVTATNL 60
GACGY ++ GYG++TAA+S+ LF G CGACFEIKC N QWC G PSI +TATN
Sbjct: 174 GACGYGNLYSQGYGVNTAALSTALFNSGLSCGACFEIKCANDRQWCHSGSPSIFITATNF 353
Query: 61 CPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRVPCARKGGIRFTVT 120
CPPN+A NDNGGWCNPPR HFDLA P +LKIAEY+ GIVPV YRRVPC + GGIRFTV
Sbjct: 354 CPPNFALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKHGGIRFTVN 533
Query: 121 GNPYFNLVKVWNVGGAGDITQLQVKGDKKLKWTDLKRNWGEKWETNAMLVGESLTFRVRA 180
G YFNLV V NV GAGDI + VKG + W + RNWG+ W++NA+LVG++L+FRV
Sbjct: 534 GFRYFNLVLVSNVAGAGDIVRTYVKG-TRTGWMPMSRNWGQNWQSNAVLVGQALSFRVTG 710
Query: 181 SDGRYSTAWKVAPKDWQFGQTFEGKNF 207
SD R ST+W +AP +WQFGQTF GKNF
Sbjct: 711 SDRRTSTSWNIAPPNWQFGQTFTGKNF 791
>TC225355 homologue to UP|Q6T5H7 (Q6T5H7) Alpha-expansin 1, partial (90%)
Length = 977
Score = 291 bits (746), Expect = 1e-79
Identities = 130/207 (62%), Positives = 155/207 (74%)
Frame = +1
Query: 1 GACGYEDVVKDGYGLDTAAVSSVLFQEGKICGACFEIKCVNSPQWCIPGQPSITVTATNL 60
GACGY ++ GYG++TAA+S+ LF G CGACFEIKC N QWC G PSI +TATN
Sbjct: 103 GACGYGNLYSQGYGVNTAALSTALFNSGLSCGACFEIKCANDKQWCHSGSPSIFITATNF 282
Query: 61 CPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRVPCARKGGIRFTVT 120
CPPNYA NDNGGWCNPPR HFDLA P +LKIAEY+ GIVPV +RRV C + GGIRFT+
Sbjct: 283 CPPNYALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVACRKHGGIRFTIN 462
Query: 121 GNPYFNLVKVWNVGGAGDITQLQVKGDKKLKWTDLKRNWGEKWETNAMLVGESLTFRVRA 180
G YFNLV + NV GAGDI VKG + W + RNWG+ W++NA+LVG++L+FRV A
Sbjct: 463 GFRYFNLVLISNVAGAGDIVHAYVKG-SRTGWMPMSRNWGQNWQSNAVLVGQALSFRVTA 639
Query: 181 SDGRYSTAWKVAPKDWQFGQTFEGKNF 207
SD R ST+W + P +WQFGQTF GKNF
Sbjct: 640 SDRRSSTSWNIVPSNWQFGQTFTGKNF 720
>TC219719 homologue to UP|Q8GZD2 (Q8GZD2) Expansin, partial (97%)
Length = 1007
Score = 182 bits (461), Expect(2) = 1e-77
Identities = 77/116 (66%), Positives = 91/116 (78%)
Frame = +1
Query: 1 GACGYEDVVKDGYGLDTAAVSSVLFQEGKICGACFEIKCVNSPQWCIPGQPSITVTATNL 60
GACGY ++ GYG++TAA+S+ LF G CGACFEIKC P+WC PG PSI +TATN
Sbjct: 193 GACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCDQDPRWCNPGSPSILITATNF 372
Query: 61 CPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRVPCARKGGIR 116
CPPN+A NDNGGWCNPPR HFDLA P +LKIA+Y+ GIVPV YRRVPC + GGI+
Sbjct: 373 CPPNFALPNDNGGWCNPPRPHFDLAMPMFLKIAQYRAGIVPVAYRRVPCRKTGGIK 540
Score = 125 bits (313), Expect(2) = 1e-77
Identities = 56/97 (57%), Positives = 72/97 (73%)
Frame = +2
Query: 111 RKGGIRFTVTGNPYFNLVKVWNVGGAGDITQLQVKGDKKLKWTDLKRNWGEKWETNAMLV 170
R+G RFT+ G YFNLV + NV GAGDI ++ +KG K W + RNWG+ W++NA+LV
Sbjct: 524 RQGASRFTINGFRYFNLVLITNVAGAGDIVRVSMKGSKTA-WMSMSRNWGQNWQSNAVLV 700
Query: 171 GESLTFRVRASDGRYSTAWKVAPKDWQFGQTFEGKNF 207
G++L+FRV SD R ST+W VAP +WQFGQTF GKNF
Sbjct: 701 GQALSFRVTGSDQRTSTSWNVAPPNWQFGQTFTGKNF 811
>TC204261 similar to UP|Q84L76 (Q84L76) Expansin precursor, partial (87%)
Length = 965
Score = 202 bits (513), Expect(2) = 6e-75
Identities = 88/135 (65%), Positives = 103/135 (76%)
Frame = +2
Query: 1 GACGYEDVVKDGYGLDTAAVSSVLFQEGKICGACFEIKCVNSPQWCIPGQPSITVTATNL 60
GACGY ++ GYG++TAA+S+ LF G CGACFEIKC P+WC PG PSI +TATN
Sbjct: 50 GACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCDQDPRWCNPGSPSIVITATNF 229
Query: 61 CPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRVPCARKGGIRFTVT 120
CPPN+A +DNGGWCNPPR HFDLA P +LKIA+YK GIVPV YRRVPC + GGIRFT+
Sbjct: 230 CPPNFALPSDNGGWCNPPRPHFDLAMPMFLKIAQYKAGIVPVSYRRVPCRKVGGIRFTIN 409
Query: 121 GNPYFNLVKVWNVGG 135
G YFNLV + GG
Sbjct: 410 GFRYFNLVLIHQRGG 454
Score = 96.3 bits (238), Expect(2) = 6e-75
Identities = 44/76 (57%), Positives = 55/76 (71%)
Frame = +3
Query: 132 NVGGAGDITQLQVKGDKKLKWTDLKRNWGEKWETNAMLVGESLTFRVRASDGRYSTAWKV 191
NV GAGDI ++ VKG K W + RNWG+ W++NA LVG++L+FRV SD R ST+ V
Sbjct: 444 NVAGAGDIARVSVKGSKT-GWNSMSRNWGQNWQSNANLVGQALSFRVTGSDRRTSTSRNV 620
Query: 192 APKDWQFGQTFEGKNF 207
AP W+FGQTF GKNF
Sbjct: 621 APSHWKFGQTFTGKNF 668
>TC226245 homologue to UP|Q9FNT0 (Q9FNT0) Expansin, partial (92%)
Length = 1220
Score = 275 bits (704), Expect = 8e-75
Identities = 120/207 (57%), Positives = 158/207 (75%)
Frame = +3
Query: 1 GACGYEDVVKDGYGLDTAAVSSVLFQEGKICGACFEIKCVNSPQWCIPGQPSITVTATNL 60
GACGY ++ GYG DT A+S+ LF G CG+C+E++C + P+WC PG SITVTATN
Sbjct: 213 GACGYGNLYSQGYGTDTVALSTALFNNGLSCGSCYEMRCDDDPRWCKPG--SITVTATNF 386
Query: 61 CPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRVPCARKGGIRFTVT 120
CPPN + N+NGGWCNPP +HFD+A+PA+L+IAEY+ GIVPV +RRVPC +KGGIRFT+
Sbjct: 387 CPPNPSLPNNNGGWCNPPLQHFDMAEPAFLQIAEYRAGIVPVAFRRVPCVKKGGIRFTIN 566
Query: 121 GNPYFNLVKVWNVGGAGDITQLQVKGDKKLKWTDLKRNWGEKWETNAMLVGESLTFRVRA 180
G+ YFNLV + NVGGAGD+ + +KG K W + RNWG+ W++N+ L G+SL+F+V
Sbjct: 567 GHSYFNLVLITNVGGAGDVNSVSIKG-SKTGWQPMSRNWGQNWQSNSYLNGQSLSFQVTT 743
Query: 181 SDGRYSTAWKVAPKDWQFGQTFEGKNF 207
SDGR T++ VAP +WQFGQTF+G F
Sbjct: 744 SDGRTVTSFNVAPANWQFGQTFQGGQF 824
>TC226247 similar to UP|Q9FNT0 (Q9FNT0) Expansin, partial (93%)
Length = 1376
Score = 275 bits (702), Expect = 1e-74
Identities = 119/206 (57%), Positives = 158/206 (75%)
Frame = +3
Query: 2 ACGYEDVVKDGYGLDTAAVSSVLFQEGKICGACFEIKCVNSPQWCIPGQPSITVTATNLC 61
ACGY ++ GYG +TAA+S+ LF G CGAC+E+KC + P+WC PG +I VTATN C
Sbjct: 207 ACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEMKCDDDPRWCKPG--TIIVTATNFC 380
Query: 62 PPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRVPCARKGGIRFTVTG 121
PPN+A N+NGGWCNPP +HFD+A+PA+L+IA+Y+ GIVPV +RRVPC +KGGIRFT+ G
Sbjct: 381 PPNFALANNNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPVAFRRVPCVKKGGIRFTING 560
Query: 122 NPYFNLVKVWNVGGAGDITQLQVKGDKKLKWTDLKRNWGEKWETNAMLVGESLTFRVRAS 181
+ YFNLV + NV GAGD+ + +KG + W + RNWG+ W++N+ L G+SL+F+V AS
Sbjct: 561 HSYFNLVLITNVAGAGDVHAVSIKG-SRTSWQPMSRNWGQNWQSNSYLNGQSLSFQVTAS 737
Query: 182 DGRYSTAWKVAPKDWQFGQTFEGKNF 207
DGR T++ VAP DWQFGQTF+G F
Sbjct: 738 DGRTVTSFNVAPSDWQFGQTFQGGQF 815
>TC206527 homologue to UP|Q84L80 (Q84L80) Expansin precursor, partial (96%)
Length = 1150
Score = 274 bits (700), Expect = 2e-74
Identities = 119/207 (57%), Positives = 156/207 (74%)
Frame = +2
Query: 1 GACGYEDVVKDGYGLDTAAVSSVLFQEGKICGACFEIKCVNSPQWCIPGQPSITVTATNL 60
GACGY ++ GYG +TAA+S+ LF G CG+C+E+KC P+WC+PG SI VTATN
Sbjct: 212 GACGYGNLYSQGYGTNTAALSTALFNNGMSCGSCYEMKCDTDPKWCLPG--SIIVTATNF 385
Query: 61 CPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRVPCARKGGIRFTVT 120
CPPN+A N+NGGWCNPP +HFDLA+PA+L+IA+YK GIVPV +RRV C +KGGIRFT+
Sbjct: 386 CPPNFALANNNGGWCNPPLQHFDLAEPAFLQIAQYKAGIVPVSFRRVSCVKKGGIRFTIN 565
Query: 121 GNPYFNLVKVWNVGGAGDITQLQVKGDKKLKWTDLKRNWGEKWETNAMLVGESLTFRVRA 180
G+ YFNLV + NVGGAGD+ + +KG + W + RNWG+ W++N+ L G+SL+F+V
Sbjct: 566 GHSYFNLVLITNVGGAGDVHSVSIKG-SRTGWQTMSRNWGQNWQSNSYLNGQSLSFQVTT 742
Query: 181 SDGRYSTAWKVAPKDWQFGQTFEGKNF 207
SDGR T+ + P +WQFGQTFEG F
Sbjct: 743 SDGRTLTSNNIVPANWQFGQTFEGAQF 823
>TC215588 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, complete
Length = 1539
Score = 266 bits (679), Expect = 6e-72
Identities = 118/207 (57%), Positives = 150/207 (72%)
Frame = +2
Query: 1 GACGYEDVVKDGYGLDTAAVSSVLFQEGKICGACFEIKCVNSPQWCIPGQPSITVTATNL 60
GACGY ++ GYG +TAA+S+ LF G CG+C+EI+C N +WC+PG SI VTATN
Sbjct: 170 GACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCANDHRWCLPG--SIVVTATNF 343
Query: 61 CPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRVPCARKGGIRFTVT 120
CPPN A N+NGGWCNPP +HFDLA+P +L+IA+YK GIVPV YRRV C RKGGIRFT+
Sbjct: 344 CPPNNALPNNNGGWCNPPLQHFDLAQPVFLRIAQYKAGIVPVSYRRVACRRKGGIRFTIN 523
Query: 121 GNPYFNLVKVWNVGGAGDITQLQVKGDKKLKWTDLKRNWGEKWETNAMLVGESLTFRVRA 180
G+ YFNLV + NVGGAGD+ + +KG + W + RNWG+ W++N L G+SL+F+V
Sbjct: 524 GHSYFNLVLITNVGGAGDVHSVSIKG-SRTGWMPMSRNWGQNWQSNNYLDGQSLSFKVTT 700
Query: 181 SDGRYSTAWKVAPKDWQFGQTFEGKNF 207
SDGR + VAP W FGQT+ G F
Sbjct: 701 SDGRTIVSNNVAPSGWSFGQTYTGAQF 781
>TC215587 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, complete
Length = 1394
Score = 265 bits (677), Expect = 1e-71
Identities = 116/207 (56%), Positives = 152/207 (73%)
Frame = +3
Query: 1 GACGYEDVVKDGYGLDTAAVSSVLFQEGKICGACFEIKCVNSPQWCIPGQPSITVTATNL 60
GACGY ++ GYG +TAA+S+ LF G CG+C+EI+CVN +WC+PG SI VTATN
Sbjct: 183 GACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCVNDHRWCLPG--SIMVTATNF 356
Query: 61 CPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRVPCARKGGIRFTVT 120
CPPN A N+ GGWCNPP HFDL++P +L+IA+Y+ GIVPV YRRVPC R+GGIRFT+
Sbjct: 357 CPPNNALPNNAGGWCNPPMHHFDLSQPVFLRIAQYRAGIVPVSYRRVPCRRRGGIRFTIN 536
Query: 121 GNPYFNLVKVWNVGGAGDITQLQVKGDKKLKWTDLKRNWGEKWETNAMLVGESLTFRVRA 180
G+ YFNLV + NVGGAGD+ + +KG + W + RNWG+ W++N L G+SL+F+V
Sbjct: 537 GHSYFNLVLITNVGGAGDVHGVAIKG-SRTGWMPMSRNWGQNWQSNNYLNGQSLSFKVTT 713
Query: 181 SDGRYSTAWKVAPKDWQFGQTFEGKNF 207
SDGR + ++ VAP W FGQT+ G F
Sbjct: 714 SDGRTAVSYNVAPAGWSFGQTYTGAQF 794
>TC226244 similar to UP|Q9FNT0 (Q9FNT0) Expansin, partial (97%)
Length = 821
Score = 263 bits (672), Expect = 4e-71
Identities = 115/201 (57%), Positives = 152/201 (75%)
Frame = +3
Query: 1 GACGYEDVVKDGYGLDTAAVSSVLFQEGKICGACFEIKCVNSPQWCIPGQPSITVTATNL 60
GACGY ++ GYG DT A+S+ LF G CG+C+E++C + P+WC PG SITVTATN
Sbjct: 228 GACGYGNLYSQGYGTDTVALSTALFNNGLSCGSCYEMRCDDDPRWCKPG--SITVTATNF 401
Query: 61 CPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRVPCARKGGIRFTVT 120
CPPN + N+NGGWCNPP +HFD+A+PA+L+IAEY+ GIVPV +RRVPC +KGGIRFT+
Sbjct: 402 CPPNPSLPNNNGGWCNPPLQHFDMAEPAFLQIAEYRAGIVPVAFRRVPCVKKGGIRFTIN 581
Query: 121 GNPYFNLVKVWNVGGAGDITQLQVKGDKKLKWTDLKRNWGEKWETNAMLVGESLTFRVRA 180
G+ YFNLV + NV GAGD+ L +KG K W + RNWG+ W++N+ L G+SL+ +V
Sbjct: 582 GHSYFNLVLITNVAGAGDVNSLSIKG-SKTGWQPMSRNWGQNWQSNSYLNGQSLSLQVTT 758
Query: 181 SDGRYSTAWKVAPKDWQFGQT 201
SDGR T++ VAP +W+FGQT
Sbjct: 759 SDGRTVTSFNVAPVNWRFGQT 821
>TC227656 homologue to UP|Q9FNT1 (Q9FNT1) Expansin, partial (89%)
Length = 1518
Score = 250 bits (638), Expect = 4e-67
Identities = 113/207 (54%), Positives = 144/207 (68%)
Frame = +3
Query: 1 GACGYEDVVKDGYGLDTAAVSSVLFQEGKICGACFEIKCVNSPQWCIPGQPSITVTATNL 60
GACGY ++ GYG DT A+S+ LF G CGACF+IKC N PQWC+PG SI VTATN
Sbjct: 243 GACGYGNLYSQGYGTDTTALSTALFNNGLSCGACFQIKCANDPQWCLPG--SIIVTATNF 416
Query: 61 CPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRVPCARKGGIRFTVT 120
CPP GGWC+PP HFDL++P + IA+Y+ GIVPV YRRV C RKGGIRFT+
Sbjct: 417 CPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVVYRRVRCRRKGGIRFTIN 572
Query: 121 GNPYFNLVKVWNVGGAGDITQLQVKGDKKLKWTDLKRNWGEKWETNAMLVGESLTFRVRA 180
G+ YFNLV V NVGGAGD+ + +KG + +W + RNWG+ W++N+ L G+SL+F V
Sbjct: 573 GHSYFNLVLVTNVGGAGDVHAVSIKG-SRTRWQAMSRNWGQNWQSNSYLNGQSLSFVVTT 749
Query: 181 SDGRYSTAWKVAPKDWQFGQTFEGKNF 207
S+G ++ VAP W FGQT+ G+ F
Sbjct: 750 SNGHSVVSYNVAPAGWSFGQTYTGRQF 830
>TC207122 homologue to UP|Q9FNT1 (Q9FNT1) Expansin, partial (87%)
Length = 1348
Score = 246 bits (627), Expect = 7e-66
Identities = 109/207 (52%), Positives = 145/207 (69%)
Frame = +1
Query: 1 GACGYEDVVKDGYGLDTAAVSSVLFQEGKICGACFEIKCVNSPQWCIPGQPSITVTATNL 60
GACGY ++ GYG +TAA+S+ LF G CG+C++IKC N PQWC+ G +I VTATN
Sbjct: 223 GACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYQIKCANDPQWCLRG--TIVVTATNF 396
Query: 61 CPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRVPCARKGGIRFTVT 120
CPP GGWC+PP HFDL++P + +IA+Y+ GIVPV YRRV C R+GGIRFT+
Sbjct: 397 CPP--------GGWCDPPNHHFDLSQPVFQQIAQYRAGIVPVVYRRVRCMRRGGIRFTIN 552
Query: 121 GNPYFNLVKVWNVGGAGDITQLQVKGDKKLKWTDLKRNWGEKWETNAMLVGESLTFRVRA 180
G+ YFNLV V NVGGAGD+ + +KG + +W + RNWG+ W++N+ L G+SL+F V
Sbjct: 553 GHSYFNLVLVTNVGGAGDVHSVAIKG-SRTRWQPMSRNWGQNWQSNSYLNGQSLSFLVTT 729
Query: 181 SDGRYSTAWKVAPKDWQFGQTFEGKNF 207
SDGR ++ AP W FGQT+ G+ F
Sbjct: 730 SDGRSVLSYNAAPPSWSFGQTYTGRQF 810
>TC206297 UP|Q8GZD3 (Q8GZD3) Expansin, complete
Length = 1262
Score = 235 bits (599), Expect = 1e-62
Identities = 108/204 (52%), Positives = 141/204 (68%), Gaps = 2/204 (0%)
Frame = +1
Query: 1 GACGYEDVVKDGYGLDTAAVSSVLFQEGKICGACFEIKC--VNSPQWCIPGQPSITVTAT 58
GACGY ++ GYG TAA+S+ LF +G CG C++I C + +WCI G+ S+TVTAT
Sbjct: 361 GACGYGNLYATGYGTRTAALSTALFNDGASCGQCYKIICDYKSDSRWCIKGR-SVTVTAT 537
Query: 59 NLCPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRVPCARKGGIRFT 118
N CPPN+A N+NGGWCNPP +HFD+A+PA+ KI Y+GGIVPV ++RVPC + GG+RF+
Sbjct: 538 NFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVLFQRVPCKKHGGVRFS 717
Query: 119 VTGNPYFNLVKVWNVGGAGDITQLQVKGDKKLKWTDLKRNWGEKWETNAMLVGESLTFRV 178
V G YF LV + NVGGAG I + +KG K W + RNWG W++NA L G+SL+FRV
Sbjct: 718 VNGRDYFELVLISNVGGAGSIQSVFIKG-SKTGWMAMSRNWGSNWQSNAYLNGQSLSFRV 894
Query: 179 RASDGRYSTAWKVAPKDWQFGQTF 202
+DG + P W FGQTF
Sbjct: 895 TTTDGETRVFQDIVPASWTFGQTF 966
>TC230075 similar to UP|Q6T5H6 (Q6T5H6) Alpha-expansin 2, partial (54%)
Length = 638
Score = 197 bits (502), Expect = 2e-51
Identities = 90/177 (50%), Positives = 115/177 (64%)
Frame = +1
Query: 31 CGACFEIKCVNSPQWCIPGQPSITVTATNLCPPNYAQGNDNGGWCNPPREHFDLAKPAYL 90
CGACF C NSP +CI G ATN CP N + GWCNPP HFD+++PA+
Sbjct: 7 CGACFXXVCYNSP-FCIRGXXXXXXXATNFCPRNGXFSANGIGWCNPPLMHFDMSQPAFT 183
Query: 91 KIAEYKGGIVPVQYRRVPCARKGGIRFTVTGNPYFNLVKVWNVGGAGDITQLQVKGDKKL 150
KIA Y+ G+VPV +RRV C ++GGIRFT+ GNPYFNLV V+NVGG GD+ + +KG
Sbjct: 184 KIALYRAGVVPVLFRRVVCLKRGGIRFTINGNPYFNLVLVYNVGGLGDVKAVSIKG-SST 360
Query: 151 KWTDLKRNWGEKWETNAMLVGESLTFRVRASDGRYSTAWKVAPKDWQFGQTFEGKNF 207
W + RNWG+ W++ VG+SL+F V SDGR + V P W+FGQTF+G F
Sbjct: 361 GWQPMTRNWGQNWQSKTYFVGQSLSFIVTTSDGRSVVSSNVVPAGWKFGQTFQGGQF 531
>TC230679 similar to UP|EX13_ARATH (Q9M9P0) Alpha-expansin 13 precursor
(At-EXP13) (AtEx13) (Ath-ExpAlpha-1.22), partial (62%)
Length = 780
Score = 187 bits (476), Expect = 2e-48
Identities = 89/164 (54%), Positives = 113/164 (68%)
Frame = +1
Query: 44 QWCIPGQPSITVTATNLCPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQ 103
+WCIPG I VTATN C PNY D GG CNPP +HF L A+ KIA +K G +PVQ
Sbjct: 7 RWCIPGX-XIIVTATNFCAPNYGFXXDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQ 183
Query: 104 YRRVPCARKGGIRFTVTGNPYFNLVKVWNVGGAGDITQLQVKGDKKLKWTDLKRNWGEKW 163
YRR+ C ++GG+RFTVTG+ F V + NV G GDI +++VKG + W + RNWG+ W
Sbjct: 184 YRRIKCRKEGGMRFTVTGSGIFISVLISNVAGHGDIGEVKVKG-SRTGWLSMGRNWGQNW 360
Query: 164 ETNAMLVGESLTFRVRASDGRYSTAWKVAPKDWQFGQTFEGKNF 207
NA+L + L+F V+ASDG+ T++ VAPKDW FGQTFEGK F
Sbjct: 361 HVNALLQNQPLSFEVKASDGKTVTSYNVAPKDWTFGQTFEGKQF 492
>TC235178 similar to UP|EXP7_ARATH (Q9LN94) Alpha-expansin 7 precursor
(At-EXP7) (AtEx7) (Ath-ExpAlpha-1.26), partial (59%)
Length = 698
Score = 180 bits (456), Expect = 5e-46
Identities = 81/149 (54%), Positives = 109/149 (72%), Gaps = 1/149 (0%)
Frame = +2
Query: 55 VTATNLCPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRVPCARKGG 114
VTATNLCPPN++Q ++NGGWCNPPR HFD++KPA++KIA++K GIVPV YRRVPC R+GG
Sbjct: 2 VTATNLCPPNWSQPSNNGGWCNPPRVHFDMSKPAFMKIAQWKAGIVPVMYRRVPCMRRGG 181
Query: 115 IRFTVTGNPYFNLVKVWNVGGAGDITQLQVKGDKKLKWTDLKRNWGEKWETNAMLVGESL 174
+RF+ GN Y+ LV V NVGG GDI+ + VKG + W + NWG ++ A L G++L
Sbjct: 182 LRFSFQGNGYWLLVYVMNVGGGGDISSMWVKGSRS-GWISMSHNWGASYQAFATLGGQAL 358
Query: 175 TFRVRASDGRYS-TAWKVAPKDWQFGQTF 202
+FR+ + R + AW VAP +W G T+
Sbjct: 359 SFRITSYTTRETIIAWNVAPSNWNVGLTY 445
>TC230074 similar to UP|Q84L36 (Q84L36) Cell wall protein Exp1 precursor,
partial (57%)
Length = 672
Score = 173 bits (438), Expect(2) = 3e-45
Identities = 77/134 (57%), Positives = 100/134 (74%)
Frame = +2
Query: 1 GACGYEDVVKDGYGLDTAAVSSVLFQEGKICGACFEIKCVNSPQWCIPGQPSITVTATNL 60
GACGY ++ + GYG TAA+S+ LF G+ CGACF++ C NSP +CI G IT+TATN
Sbjct: 158 GACGYGNLYQQGYGTSTAALSAALFNNGQTCGACFQLVCYNSP-FCIRGAGPITITATNF 334
Query: 61 CPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRVPCARKGGIRFTVT 120
CP N + + GWCNPP HFD+++PA+ KIA Y+ G+VPV +RRV C ++GGIRFT+
Sbjct: 335 CPRNGSFSANGIGWCNPPLMHFDMSQPAFTKIALYRAGVVPVLFRRVVCLKRGGIRFTIN 514
Query: 121 GNPYFNLVKVWNVG 134
GNPYFNLV V+NVG
Sbjct: 515 GNPYFNLVLVYNVG 556
Score = 25.8 bits (55), Expect(2) = 3e-45
Identities = 12/32 (37%), Positives = 16/32 (49%)
Frame = +1
Query: 141 QLQVKGDKKLKWTDLKRNWGEKWETNAMLVGE 172
Q Q KG + L W + RNWG+ T G+
Sbjct: 577 QCQ*KGHQ-LGWQPMTRNWGQNGRTKTYFXGQ 669
>TC215589 homologue to UP|Q8L5G5 (Q8L5G5) Alpha-expansin 3, partial (60%)
Length = 495
Score = 156 bits (394), Expect = 7e-39
Identities = 67/107 (62%), Positives = 83/107 (76%)
Frame = +2
Query: 1 GACGYEDVVKDGYGLDTAAVSSVLFQEGKICGACFEIKCVNSPQWCIPGQPSITVTATNL 60
GACGY ++ GYG +TAA+S+ LF G CG+C+EI+C N +WC+PG SI VTATN
Sbjct: 176 GACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCANDHRWCLPG--SIVVTATNF 349
Query: 61 CPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRV 107
CPPN A NDNGGWCNPP +HFDLA+P +L+IA+YK GIVPV +RRV
Sbjct: 350 CPPNNALPNDNGGWCNPPLQHFDLAQPVFLRIAQYKAGIVPVSFRRV 490
>TC230680 similar to UP|EX13_ARATH (Q9M9P0) Alpha-expansin 13 precursor
(At-EXP13) (AtEx13) (Ath-ExpAlpha-1.22), partial (61%)
Length = 648
Score = 154 bits (388), Expect = 4e-38
Identities = 71/125 (56%), Positives = 89/125 (70%)
Frame = +3
Query: 1 GACGYEDVVKDGYGLDTAAVSSVLFQEGKICGACFEIKCVNSPQWCIPGQPSITVTATNL 60
GACGY D+VK GYG+ T +S LF+ G+ICGACFE++CV +WCIPG SI VTATN
Sbjct: 264 GACGYGDLVKGGYGMATVGLSEALFERGQICGACFELRCVEDMRWCIPGT-SIIVTATNF 440
Query: 61 CPPNYAQGNDNGGWCNPPREHFDLAKPAYLKIAEYKGGIVPVQYRRVPCARKGGIRFTVT 120
C PNY +D CNPP +HF L A+ KIA +K G +PVQYRR+ C ++GG+RFTVT
Sbjct: 441 CAPNYGFTSDGCFHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGMRFTVT 620
Query: 121 GNPYF 125
G+ F
Sbjct: 621 GSGIF 635
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.319 0.139 0.462
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,541,326
Number of Sequences: 63676
Number of extensions: 186040
Number of successful extensions: 1005
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of query: 207
length of database: 12,639,632
effective HSP length: 93
effective length of query: 114
effective length of database: 6,717,764
effective search space: 765825096
effective search space used: 765825096
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Lotus: description of TM0012c.2