
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0012a.7
(1015 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC203681 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expr... 50 5e-06
TC213615 similar to UP|Q9SUL7 (Q9SUL7) SNF1 like protein kinase ... 49 9e-06
TC216484 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabin... 49 9e-06
CO985160 48 2e-05
TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like ara... 48 2e-05
TC203386 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expr... 47 4e-05
TC228914 similar to UP|DAH1_MOUSE (Q9QYB2) Dachshund homolog 1 (... 47 6e-05
TC226993 homologue to UP|GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 deh... 47 6e-05
TC217534 similar to GB|AAB62826.1|2252827|IG005I10 coded for by ... 47 6e-05
TC225560 similar to UP|Q9FUL8 (Q9FUL8) Arabinogalactan protein, ... 47 6e-05
TC213885 weakly similar to UP|Q9VUB7 (Q9VUB7) CG32133-PA, partia... 46 9e-05
TC225559 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expr... 46 9e-05
TC226466 weakly similar to GB|AAD49970.1|5734705|F24J5 F24J5.4 {... 45 1e-04
TC219909 weakly similar to UP|ENL2_ARATH (Q9T076) Early nodulin-... 45 1e-04
TC203407 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-pr... 45 2e-04
TC220421 weakly similar to UP|GP1_CHLRE (Q9FPQ6) Vegetative cell... 44 3e-04
AW101289 44 5e-04
AI444066 similar to GP|9294409|dbj polygalacturonase inhibitor-l... 43 6e-04
TC211828 similar to UP|RPIA_ARATH (Q9ZU38) Probable-ribose 5-pho... 43 6e-04
TC226468 weakly similar to UP|O65450 (O65450) Glycine-rich prote... 43 6e-04
>TC203681 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expressed in
cucumber hypocotyls, complete cds (Arabinogalactan
protein), partial (40%)
Length = 913
Score = 50.1 bits (118), Expect = 5e-06
Identities = 43/144 (29%), Positives = 60/144 (40%)
Frame = +3
Query: 548 SGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGAT 607
+ G +P A PTT+ AA T P A PA+ P+ + A VA+ +S
Sbjct: 60 AAVGGQSPAASPTTSPP-----------AATTTPFASPATAPSKPKSPAPVASPTSSSPP 206
Query: 608 AASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKS 667
A+S NA A + +P T SPP + A P+P T A + P+ +
Sbjct: 207 ASSP--NAATATPPASSP---------TVASPPSKAAAPAPVATPPAATPPA-------A 332
Query: 668 CPGAATTSEAAQIEQAPAPEVGSS 691
P AAT + PAP SS
Sbjct: 333 TPPAATPPAVTPVSSPPAPVPVSS 404
Score = 47.0 bits (110), Expect = 4e-05
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 23/176 (13%)
Frame = +3
Query: 546 TSSGAGTSNPGAQPTTA----------AAPKGKN--VAEASIAAATEPTAVP--ASTPAS 591
TS A T+ P A P TA A+P + + + A AT P + P AS P+
Sbjct: 99 TSPPAATTTPFASPATAPSKPKSPAPVASPTSSSPPASSPNAATATPPASSPTVASPPSK 278
Query: 592 AGATAAVA---AESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSP 648
A A A VA A + AT +A A +S P+ P S P AP +P
Sbjct: 279 AAAPAPVATPPAATPPAATPPAATPPAVTPVSSPPAPVPVSSPPAPVPVSSPPALAPTTP 458
Query: 649 PP-TRDAGSMPSPPHQGEKSCPGA---ATTSEAAQIEQAPAPEVGS--SSYYNMLP 698
P + +P+P + +K + + + + PAP VG+ SS +M P
Sbjct: 459 APVVAPSAEVPAPAPKSKKKTKKSKKHTAPAPSPSLLGPPAPPVGAPGSSQDSMSP 626
Score = 30.0 bits (66), Expect = 5.4
Identities = 28/102 (27%), Positives = 35/102 (33%)
Frame = -1
Query: 527 GAENQAESTKAPKRRRLTRTSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPA 586
GA A A LT T +G + GA G VA +AA
Sbjct: 475 GATTGAGVVGASAGGELTGTGAGGELTGTGAGGELTGVTAG-GVAAGGVAAGG---VAAG 308
Query: 587 STPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGE 628
AGA A +++VG A V A A D +GE
Sbjct: 307 GVATGAGAAALDGGDATVGDEAGGVAVAALGDEAGGDDDVGE 182
>TC213615 similar to UP|Q9SUL7 (Q9SUL7) SNF1 like protein kinase
(CBL-interacting protein kinase 4), partial (45%)
Length = 674
Score = 49.3 bits (116), Expect = 9e-06
Identities = 35/147 (23%), Positives = 64/147 (42%)
Frame = +3
Query: 546 TSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVG 605
T A T+ P + +T ++P S +++T P A AS+ S+ A AA + S
Sbjct: 246 TPCAASTTTPTSSKSTRSSPPRPR----STSSSTSPVA--ASSSPSSPAAAASRSPSPAA 407
Query: 606 ATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGE 665
+ +S+ ++A+ A +S T + TP + SPP + ++ S P
Sbjct: 408 TSRSSSPLSASATAMASPTETSSHRTSSSTPPATSRSPTSASPPSRNTSTTVSSTPPAAR 587
Query: 666 KSCPGAATTSEAAQIEQAPAPEVGSSS 692
+ P +++ +A P P +SS
Sbjct: 588 RPSPRQRSSAASATTAXKPTPGPAASS 668
>TC216484 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan
protein 1 precursor, partial (58%)
Length = 1213
Score = 49.3 bits (116), Expect = 9e-06
Identities = 43/143 (30%), Positives = 63/143 (43%), Gaps = 2/143 (1%)
Frame = +1
Query: 544 TRTSSGAGT-SNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAES 602
TRT+S A + S P + P+T +P + + S A P+A P++TP + + +
Sbjct: 106 TRTTSPASSQSTPSSPPSTTTSPSPTSPPK-STAKPPSPSA-PSTTPPCRTFSRSTPPST 279
Query: 603 SVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPH 662
++ S + T A SS + P SPP PP+PPP A S SP
Sbjct: 280 PSRTSSPSTSSSTTSAPRSST-------RSPTAPPSPPQCTKPPAPPPDPPASS-TSPTS 435
Query: 663 QGEKS-CPGAATTSEAAQIEQAP 684
EKS P TT+ + Q P
Sbjct: 436 TAEKSHSPPKTTTAHSPQRSSNP 504
>CO985160
Length = 777
Score = 47.8 bits (112), Expect = 2e-05
Identities = 44/137 (32%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Frame = -1
Query: 491 LEDMNFTNAELLKARERRMARFSPKFNTEGDAKKRGGAENQAESTKAPKRRRLTRTSSGA 550
+E TNA A + A S T A + A +T A T +S+ A
Sbjct: 768 VESAAATNAATTSADAKPTAASSAVATTAAATSHATTATSSAPTTAA------TTSSAAA 607
Query: 551 GTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAV---AAESSVGAT 607
+ + PTTAA + A+ AAAT +A A+ S+ ATAA AA + AT
Sbjct: 606 AAAATSSAPTTAAT-----TSSAAAAAATTSSAAAAAATTSSAATAAATGPAAAACAAAT 442
Query: 608 AASAGVNATKAAASSDT 624
AA++ AT AA S+ T
Sbjct: 441 AAASANPATAAATSTST 391
Score = 35.4 bits (80), Expect = 0.13
Identities = 24/49 (48%), Positives = 29/49 (58%), Gaps = 1/49 (2%)
Frame = +2
Query: 573 ASIAAATEPTAVPASTPASAG-ATAAVAAESSVGATAASAGVNATKAAA 620
A++A E AV A+ A+AG AAVAAE V A AA+ V A AAA
Sbjct: 410 AAVAGFAEAAAVAAAQAAAAGPVAAAVAAEEVVAAAAAAEEVVAAAAAA 556
Score = 34.7 bits (78), Expect = 0.22
Identities = 33/121 (27%), Positives = 51/121 (41%), Gaps = 1/121 (0%)
Frame = -1
Query: 573 ASIAAATEPTAVPASTPASAGATA-AVAAESSVGATAASAGVNATKAAASSDTPIGEKEK 631
A+ +A +PTA ++ +A AT+ A A SS TAA+ A AAA+S P
Sbjct: 741 ATTSADAKPTAASSAVATTAAATSHATTATSSAPTTAATTSSAAAAAAATSSAPTTAATT 562
Query: 632 ENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKSCPGAATTSEAAQIEQAPAPEVGSS 691
+ + A + T A + + G + AA T+ AA A A +S
Sbjct: 561 SSAAAAAATTSSAAAAAATTSSAATAAA---TGPAAAACAAATA-AASANPATAAATSTS 394
Query: 692 S 692
+
Sbjct: 393 T 391
Score = 33.5 bits (75), Expect = 0.48
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Frame = -1
Query: 522 AKKRGGAENQAESTKAPKRRRLTRTSSGAGTSNPGAQPTTAAA-PKGKNVAEASIAAATE 580
A A A +T + T +S+ A + + T AA P A A+ AA+
Sbjct: 603 AAATSSAPTTAATTSSAAAAAATTSSAAAAAATTSSAATAAATGPAAAACAAATAAASAN 424
Query: 581 PTAVPAS----TPASAGATAAVAAESSVGATAASAG 612
P A+ TP + ATAA +A ++ A AA+ G
Sbjct: 423 PATAAATSTSTTPTTT-ATAAASAVTATAAAAATDG 319
>TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like
arabinogalactan-protein 2, partial (57%)
Length = 1652
Score = 47.8 bits (112), Expect = 2e-05
Identities = 37/135 (27%), Positives = 51/135 (37%)
Frame = +2
Query: 538 PKRRRLTRTSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAA 597
P T S + TS+P +T +APK ++ + P++ P S P +
Sbjct: 215 PPSSTSTSPSPPSKTSSPSTSSSTTSAPKS-----STRSTTAPPSSPPCSRPPAPPPAPP 379
Query: 598 VAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSM 657
+ S A SA T A S+ + K T SP + APP PPT
Sbjct: 380 ATSTSPTSRPARSASPPKTTTAPSTPSTSNPSRKCPTT--SPSSKSAPPLAPPTPRHPPP 553
Query: 658 PSPPHQGEKSCPGAA 672
P PP CP A
Sbjct: 554 PPPPST*SPLCPNKA 598
Score = 43.9 bits (102), Expect = 4e-04
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
Frame = +2
Query: 546 TSSGAGTSNPGAQP--TTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESS 603
TS P + P TT+ +P + A+ + + P+ +P P+S + + +++S
Sbjct: 83 TSPACWPHTPASPPSTTTSPSPTWPKRSTAARPSPSWPSTMPPCPPSSTSTSPSPPSKTS 262
Query: 604 VGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPP--------------SPP 649
+T++S +A K++ S T + P PP APP SPP
Sbjct: 263 SPSTSSST-TSAPKSSTRSTTAPPSSPPCSRPPAPPP---APPATSTSPTSRPARSASPP 430
Query: 650 PTRDAGSMPSPPHQGEKSCPGAATTSEAAQIEQAPAP 686
T A S PS + K CP + +S++A P P
Sbjct: 431 KTTTAPSTPSTSNPSRK-CPTTSPSSKSAPPLAPPTP 538
Score = 31.6 bits (70), Expect = 1.8
Identities = 23/55 (41%), Positives = 25/55 (44%)
Frame = +2
Query: 81 NRPIVRSNSPLHATHLPKTIMTSNLPHASNTRHPSSFSPSPIKTLLPHCHPFPRP 135
+RP RS SP T P T TSN T PSS S P+ P HP P P
Sbjct: 401 SRP-ARSASPPKTTTAPSTPSTSNPSRKCPTTSPSSKSAPPLAPPTPR-HPPPPP 559
>TC203386 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expressed in
cucumber hypocotyls, complete cds (Arabinogalactan
protein), partial (40%)
Length = 649
Score = 47.0 bits (110), Expect = 4e-05
Identities = 43/166 (25%), Positives = 63/166 (37%), Gaps = 5/166 (3%)
Frame = +1
Query: 548 SGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGAT 607
+ G +P A PTT++A ++ + P A P S+P ++ AA A T
Sbjct: 55 AAVGGQSPAAAPTTSSASPATAPSKPK-PKSPAPVASPTSSPPASSPNAATATPPVSSPT 231
Query: 608 AASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKS 667
AS A A ++ P+ +PP SPP S P+P S
Sbjct: 232 VASPPSKAAAPAPATTPPVATPPAATPPAATPPAVTPVSSPPAPVPVSSPPAP--VPVSS 405
Query: 668 CPGAATTSEAAQIE-----QAPAPEVGSSSYYNMLPNAIEPSEFLL 708
P A T+ A + APAP+ + + A PS LL
Sbjct: 406 PPALAPTTPAPVVAPSAEVPAPAPKSKKKTKKSKKHTAPAPSPALL 543
Score = 41.6 bits (96), Expect = 0.002
Identities = 40/158 (25%), Positives = 62/158 (38%), Gaps = 22/158 (13%)
Frame = +1
Query: 546 TSSGAGTSNPGAQPTTAAAPKGKNVAEASIAA---ATEPTAVP-ASTPASAGATAAVAAE 601
+S A T+ P T A+P K A A AT P A P A+TP + ++ A
Sbjct: 184 SSPNAATATPPVSSPTVASPPSKAAAPAPATTPPVATPPAATPPAATPPAVTPVSSPPAP 363
Query: 602 SSVGATAASAGVNATKAAA----------SSDTPIGEKEKENETPKSPPHQE-------- 643
V + A V++ A A S++ P + + +T KS H
Sbjct: 364 VPVSSPPAPVPVSSPPALAPTTPAPVVAPSAEVPAPAPKSKKKTKKSKKHTAPAPSPALL 543
Query: 644 APPSPPPTRDAGSMPSPPHQGEKSCPGAATTSEAAQIE 681
PP+PP + +P + S PG A + + + E
Sbjct: 544 GPPAPP-------VGAPGSSQDASSPGPAVSEDESGAE 636
Score = 29.6 bits (65), Expect = 7.0
Identities = 21/87 (24%), Positives = 34/87 (38%)
Frame = +1
Query: 604 VGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQ 663
+G A+ G + AA ++ + PKSP +P S PP + + P
Sbjct: 40 IGIVVAAVGGQSPAAAPTTSSASPATAPSKPKPKSPAPVASPTSSPPASSPNAATATPPV 219
Query: 664 GEKSCPGAATTSEAAQIEQAPAPEVGS 690
+ A+ S+AA A P V +
Sbjct: 220 SSPTV--ASPPSKAAAPAPATTPPVAT 294
>TC228914 similar to UP|DAH1_MOUSE (Q9QYB2) Dachshund homolog 1 (Dach1),
partial (3%)
Length = 784
Score = 46.6 bits (109), Expect = 6e-05
Identities = 45/189 (23%), Positives = 73/189 (37%), Gaps = 15/189 (7%)
Frame = +3
Query: 514 PKFNTEGDAKKRGGAENQAESTKAPKRRRLTRTSSGAGTSNPGAQPTTAAAPKGKNV--- 570
P +T + G A + + S A KRR S A +++P T++ A K+
Sbjct: 171 PSPSTTPTSSAPGNAPHSSPS--ASKRRPTPSGPSSAASTSPKPTSTSSRAAPSKSPFTW 344
Query: 571 ------AEASIAAATEPTAVPASTPASAGATAAVAAESSVGATAASAGVNA------TKA 618
S A+ P A AST ++ A + A S+ +A+ + T
Sbjct: 345 PSASLGTSMSSPASPPPPAPNASTSSTTSAASPALASSAANTASATTAPSLPSIPSRTTP 524
Query: 619 AASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKSCPGAATTSEAA 678
+ TP + +P + P + SP P+ + S SPP E P A T
Sbjct: 525 TTARSTPSSSNPTSSTSPTATPKRTRVSSPTPSSSSTSRSSPPSPKE---PTATVTVSHT 695
Query: 679 QIEQAPAPE 687
+ E+A P+
Sbjct: 696 RGEEANTPQ 722
Score = 30.0 bits (66), Expect = 5.4
Identities = 18/57 (31%), Positives = 24/57 (41%)
Frame = +3
Query: 636 PKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKSCPGAATTSEAAQIEQAPAPEVGSSS 692
P + P +PPS PP SP S PG A S + ++ P P SS+
Sbjct: 129 PPASPRSSSPPSSPP--------SPSTTPTSSAPGNAPHSSPSASKRRPTPSGPSSA 275
>TC226993 homologue to UP|GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase
(GDP-D-mannose dehydratase) (GMD) , partial (94%)
Length = 1388
Score = 46.6 bits (109), Expect = 6e-05
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
Frame = +2
Query: 538 PKRRRLTRTSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATE---PTAVPASTPASAGA 594
P R + T+ + T P A +T ++P + S+ + + PT P S+P + A
Sbjct: 293 PTRPA*SSTTPISPTPPPSAAGSTPSSPTRSTTSPLSLTSPSPSRYPTTPPTSSPPAPSA 472
Query: 595 TAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDA 654
++ + +S A ++ S P+ +PK PP APP+PPP
Sbjct: 473 SSRPSVPTSPPPAAPTSATTKPAPPRCSAPPL------RRSPKPPPSTPAPPTPPPNAPP 634
Query: 655 GSMPSPPHQGEKSCPGAATTS 675
P + S P A++S
Sbjct: 635 TGTP*TTARLTPSSPATASSS 697
Score = 32.0 bits (71), Expect = 1.4
Identities = 32/124 (25%), Positives = 42/124 (33%), Gaps = 26/124 (20%)
Frame = +2
Query: 603 SVGATAASAGVNATKAAASSDTPIGEKEKEN---ETPKSPPHQEAPP------------- 646
S T+ T+ A SS TPI + TP SP P
Sbjct: 257 SASTTSMWIPTTPTRPA*SSTTPISPTPPPSAAGSTPSSPTRSTTSPLSLTSPSPSRYPT 436
Query: 647 ----SPPPTRDAGSMPSPPHQGEKSCPGAATTS------EAAQIEQAPAPEVGSSSYYNM 696
S PP A S PS P + P +ATT A + ++P P + +
Sbjct: 437 TPPTSSPPAPSASSRPSVPTSPPPAAPTSATTKPAPPRCSAPPLRRSPKPPPSTPAPPTP 616
Query: 697 LPNA 700
PNA
Sbjct: 617 PPNA 628
Score = 30.8 bits (68), Expect = 3.1
Identities = 41/162 (25%), Positives = 59/162 (36%), Gaps = 14/162 (8%)
Frame = +2
Query: 545 RTSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSV 604
RTS+ + ++ PTT P + S T P + STP+S + S +
Sbjct: 242 RTSTRSASTTSMWIPTTPTRPA*SSTTPIS---PTPPPSAAGSTPSSPTRSTT----SPL 400
Query: 605 GATAASAGVNATKAAASSDTPIGEKEKENETPKSPPH--------QEAPP--SPPPTRDA 654
T+ S T SS P P SPP + APP S PP R +
Sbjct: 401 SLTSPSPSRYPTTPPTSSP-PAPSASSRPSVPTSPPPAAPTSATTKPAPPRCSAPPLRRS 577
Query: 655 ----GSMPSPPHQGEKSCPGAATTSEAAQIEQAPAPEVGSSS 692
S P+PP + P + A +PA S++
Sbjct: 578 PKPPPSTPAPPTPPPNAPPTGTP*TTARLTPSSPATASSSTT 703
>TC217534 similar to GB|AAB62826.1|2252827|IG005I10 coded for by A. thaliana
cDNA N96903 {Arabidopsis thaliana;} , partial (98%)
Length = 1147
Score = 46.6 bits (109), Expect = 6e-05
Identities = 43/154 (27%), Positives = 68/154 (43%), Gaps = 1/154 (0%)
Frame = +3
Query: 534 STKAPKRRRLTR-TSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASA 592
ST A R T T S +P A + + ++++ +++A PT AST +SA
Sbjct: 90 STTAVSCRGQTH*TLSSPSRGSPSASSSPS*GSTSTSLSQNALSAT--PTRCSASTSSSA 263
Query: 593 GATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTR 652
ATA + + AT+ SA +SS P + + T + PPS P
Sbjct: 264 -ATALLRLPPAPPATSTSATTAPLSTPSSSPLPSAARSPASPTASASSPASFPPSLPSPS 440
Query: 653 DAGSMPSPPHQGEKSCPGAATTSEAAQIEQAPAP 686
A + P+PP +S AT+S A + ++A P
Sbjct: 441 AATAPPTPPE--SRSSSRGATSSSARRAQRAVNP 536
>TC225560 similar to UP|Q9FUL8 (Q9FUL8) Arabinogalactan protein, partial
(48%)
Length = 1030
Score = 46.6 bits (109), Expect = 6e-05
Identities = 47/198 (23%), Positives = 69/198 (34%), Gaps = 9/198 (4%)
Frame = +2
Query: 548 SGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGAT 607
+G G +P A P+ A T A PA P++ + A VA+ S
Sbjct: 119 AGVGGQSPAAAPSNTPA--------------TPAAATPAQAPSTPNSPAPVASPKSSPPA 256
Query: 608 AASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKS 667
++ AT A++ + +P TP +P PP+ P + SPP S
Sbjct: 257 SSPKPATATPASSPAASP-------TTTPAAPAPATKPPAASPPPAPVPVSSPPAPVPVS 415
Query: 668 CPGAATTSEAAQIEQAPAPEVGSSSYYNMLPNAIEPSEFLLA---------GLNRDVIEK 718
P A A APAP A PS LL G + D
Sbjct: 416 SPPAPVPVAAPTTPVAPAPAPSKHKKKGKKHGAPAPSPSLLGPPAPPTGAPGPSEDASSP 595
Query: 719 EVLSRGLNDTKEETLACL 736
+ +++ ET+ CL
Sbjct: 596 GPATAANDESGAETIMCL 649
Score = 45.8 bits (107), Expect = 9e-05
Identities = 43/156 (27%), Positives = 61/156 (38%), Gaps = 10/156 (6%)
Frame = +2
Query: 547 SSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGA 606
S A SN A P A + + + A+ ++ PAS+P A AT A + +S
Sbjct: 137 SPAAAPSNTPATPAAATPAQAPSTPNSPAPVASPKSSPPASSPKPATATPASSPAASPTT 316
Query: 607 TAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSP----PPTRDAGSMPSPPH 662
T A A ATK A+S P +P +P +PP+P PT P+P
Sbjct: 317 TPA-APAPATKPPAASPPP---APVPVSSPPAPVPVSSPPAPVPVAAPTTPVAPAPAPSK 484
Query: 663 QGEKS------CPGAATTSEAAQIEQAPAPEVGSSS 692
+K P + A AP P +SS
Sbjct: 485 HKKKGKKHGAPAPSPSLLGPPAPPTGAPGPSEDASS 592
Score = 42.0 bits (97), Expect = 0.001
Identities = 39/153 (25%), Positives = 54/153 (34%), Gaps = 5/153 (3%)
Frame = +2
Query: 513 SPKFNTEGDAKKRGGAENQAESTKAPKRRRLTRTSSGAGTSNPGAQPTTAAAPKGKNVAE 572
+P T A + S K+ + ++ S+P A PTT A
Sbjct: 170 TPAAATPAQAPSTPNSPAPVASPKSSPPASSPKPATATPASSPAASPTTTPA-------- 325
Query: 573 ASIAAATEPTAVPASTPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKE 632
A A P A P P + A SS A A A A + + +K K+
Sbjct: 326 APAPATKPPAASPPPAPVPVSSPPAPVPVSSPPAPVPVAAPTTPVAPAPAPSKHKKKGKK 505
Query: 633 NETPKSPPHQEAPPSPP-----PTRDAGSMPSP 660
+ P P PP+PP P+ DA S P P
Sbjct: 506 HGAPAPSPSLLGPPAPPTGAPGPSEDASS-PGP 601
Score = 38.9 bits (89), Expect = 0.012
Identities = 44/174 (25%), Positives = 62/174 (35%), Gaps = 8/174 (4%)
Frame = +2
Query: 526 GGAENQAESTKAPKRRRLTRTSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVP 585
GG A + P + T N P A+PK A + A TA P
Sbjct: 128 GGQSPAAAPSNTPATPAAATPAQAPSTPN---SPAPVASPKSSPPASSPKPA----TATP 286
Query: 586 ASTPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAP 645
AS+PA++ T A + AAS A +S P+ P + P
Sbjct: 287 ASSPAASPTTTPAAPAPATKPPAASP-PPAPVPVSSPPAPVPVSSPPAPVPVAAPTTPVA 463
Query: 646 PSPPPT-------RDAGSMPSPPHQGEKSCP-GAATTSEAAQIEQAPAPEVGSS 691
P+P P+ + PSP G + P GA SE A +P P ++
Sbjct: 464 PAPAPSKHKKKGKKHGAPAPSPSLLGPPAPPTGAPGPSEDA---SSPGPATAAN 616
>TC213885 weakly similar to UP|Q9VUB7 (Q9VUB7) CG32133-PA, partial (4%)
Length = 540
Score = 45.8 bits (107), Expect = 9e-05
Identities = 32/96 (33%), Positives = 49/96 (50%)
Frame = +1
Query: 528 AENQAESTKAPKRRRLTRTSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPAS 587
A + A +T A T+S A + + TAAA ++ AAT P A ++
Sbjct: 46 ATSSAVATTAAATSHAATTTSSAAAAAAASSAATAAA------TSSATTAATAPAAAASA 207
Query: 588 TPASAGATAAVAAESSVGATAASAGVNATKAAASSD 623
TPA+A A A+ + + ATAA++ V AT A A++D
Sbjct: 208 TPATA-AAASTSTTPTTTATAAASAVAATAATAATD 312
Score = 43.9 bits (102), Expect = 4e-04
Identities = 27/75 (36%), Positives = 41/75 (54%)
Frame = +1
Query: 548 SGAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGAT 607
S A T+ A+PT ++ A S AA T +A A+ AS+ ATAA + ++ AT
Sbjct: 7 SAAATAPADAKPTATSSAVATTAAATSHAATTTSSAAAAAA-ASSAATAAATSSATTAAT 183
Query: 608 AASAGVNATKAAASS 622
A +A +AT A A++
Sbjct: 184 APAAAASATPATAAA 228
Score = 33.5 bits (75), Expect = 0.48
Identities = 29/103 (28%), Positives = 40/103 (38%)
Frame = +1
Query: 576 AAATEPTAVPASTPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENET 635
AAAT P A A++ A A AA +S AT S+ A AAA+S T
Sbjct: 10 AAATAPA--DAKPTATSSAVATTAAATSHAATTTSS---AAAAAAASSAATAAATSSATT 174
Query: 636 PKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKSCPGAATTSEAA 678
+ P A +P A + +P + A T+ A
Sbjct: 175 AATAPAAAASATPATAAAASTSTTPTTTATAAASAVAATAATA 303
Score = 33.1 bits (74), Expect = 0.63
Identities = 26/90 (28%), Positives = 33/90 (35%), Gaps = 13/90 (14%)
Frame = +1
Query: 534 STKAPKRRRLTRTSSGAGTSNPGAQPTTAAAPKGKNVAEASIAAA-------------TE 580
+T A T TSS A + + T AA A A AAA T
Sbjct: 67 TTAAATSHAATTTSSAAAAAAASSAATAAATSSATTAATAPAAAASATPATAAAASTSTT 246
Query: 581 PTAVPASTPASAGATAAVAAESSVGATAAS 610
PT + ++ ATAA AA G +S
Sbjct: 247 PTTTATAAASAVAATAATAATDGWGRNGSS 336
Score = 30.0 bits (66), Expect = 5.4
Identities = 25/80 (31%), Positives = 32/80 (39%), Gaps = 4/80 (5%)
Frame = -2
Query: 555 PGAQPTTAAAPKGKNVAEASIAAATEPTAVPA----STPASAGATAAVAAESSVGATAAS 610
P A A + A A + E A A + A+AGA AAV AE A AA
Sbjct: 314 PSVAAVAAVAATAEAAAVAVVVGVVEVEAAAAVAGVAEAAAAGAVAAVVAEEVAAAVAAE 135
Query: 611 AGVNATKAAASSDTPIGEKE 630
A AAA+ + + E
Sbjct: 134 ---EAAAAAAAEEVVVAACE 84
>TC225559 similar to UP|Q9XIV1 (Q9XIV1) Cucumis sativus mRNA expressed in
cucumber hypocotyls, complete cds (Arabinogalactan
protein), partial (47%)
Length = 870
Score = 45.8 bits (107), Expect = 9e-05
Identities = 43/143 (30%), Positives = 60/143 (41%), Gaps = 3/143 (2%)
Frame = +3
Query: 548 SGAGTSNPGAQPT-TAAAPKGKNVAEA--SIAAATEPTAVPASTPASAGATAAVAAESSV 604
+G G +P A P+ T A P A+A ++ + P A P S+P +A + AA +
Sbjct: 120 AGVGGQSPAAAPSNTPATPAAATPAQAPSTVPKSPAPVASPKSSPPAATPASTPAASPT- 296
Query: 605 GATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQG 664
T +A TK A+S P P +PP P S PP S P P
Sbjct: 297 --TTPAAPAPVTKPPAASPPPA------TPPPATPPPAPVPVSSPPAPVPVSSPPAP--- 443
Query: 665 EKSCPGAATTSEAAQIEQAPAPE 687
P AA T+ A +PAP+
Sbjct: 444 ---VPVAAPTTPVA---PSPAPK 494
Score = 42.4 bits (98), Expect = 0.001
Identities = 49/152 (32%), Positives = 60/152 (39%), Gaps = 7/152 (4%)
Frame = +3
Query: 531 QAEST--KAPKRRRLTRTSSGAGT--SNPGAQPTT---AAAPKGKNVAEASIAAATEPTA 583
QA ST K+P ++S A T S P A PTT A AP K A AS AT P A
Sbjct: 195 QAPSTVPKSPAPVASPKSSPPAATPASTPAASPTTTPAAPAPVTKPPA-ASPPPATPPPA 371
Query: 584 VPASTPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQE 643
P P + A SS A A T A S P +K+ + +P
Sbjct: 372 TPPPAPVPVSSPPAPVPVSSPPAPVPVAA--PTTPVAPSPAPKHKKKGKKHGAPAPSPLL 545
Query: 644 APPSPPPTRDAGSMPSPPHQGEKSCPGAATTS 675
PP+PP P P + S PG T +
Sbjct: 546 GPPAPPT-----GAPGPSE--DASSPGPGTAA 620
>TC226466 weakly similar to GB|AAD49970.1|5734705|F24J5 F24J5.4 {Arabidopsis
thaliana;} , partial (22%)
Length = 978
Score = 45.4 bits (106), Expect = 1e-04
Identities = 38/138 (27%), Positives = 55/138 (39%), Gaps = 10/138 (7%)
Frame = +1
Query: 559 PTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGATAASAGVNATKA 618
P+ A AP AS+ A + PT + A++P+S G AV +S T+ ++ A
Sbjct: 46 PSNAQAP-------ASVPANSPPTTLAATSPSS-GTPPAVTQAASPPTTSNPPTISQPPA 201
Query: 619 AASSD----TPIGEKEKENETPKSPPHQEAPPSPPPTRDAGS------MPSPPHQGEKSC 668
+ TP K +PK+P Q PP PP + +P PP
Sbjct: 202 IVAPKPAPVTPPAPKVAPASSPKAPTPQTPPPQPPKVSPVAAPTLPPPLPPPPVATPPPL 381
Query: 669 PGAATTSEAAQIEQAPAP 686
P A+ APAP
Sbjct: 382 PPPKIAPTPAKTSPAPAP 435
>TC219909 weakly similar to UP|ENL2_ARATH (Q9T076) Early nodulin-like protein
2 precursor (Phytocyanin-like protein), partial (21%)
Length = 943
Score = 45.4 bits (106), Expect = 1e-04
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 5/148 (3%)
Frame = +1
Query: 559 PTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGATAASAGVNATKA 618
P T+ +P +A+ + P P+ + S + A + +VG A S ++
Sbjct: 244 PKTSPSPSPSQSPKANPPTVSPPLPSPSPSVHSKSLSPASSPVPAVGTPAISPAISIPTL 423
Query: 619 AASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMP-----SPPHQGEKSCPGAAT 673
A + TP P P +PPSP P+ + P SPP G S P A
Sbjct: 424 APETGTP---------PPSLGPSSSSPPSPGPSSSSPPSPGPSSSSPPPAGPTSPPSLAP 576
Query: 674 TSEAAQIEQAPAPEVGSSSYYNMLPNAI 701
+S + AP+P+ +S +++ P+++
Sbjct: 577 SSNST----APSPK---NSGFSVAPSSV 639
Score = 33.5 bits (75), Expect = 0.48
Identities = 19/59 (32%), Positives = 29/59 (48%), Gaps = 3/59 (5%)
Frame = +1
Query: 635 TPKSPPHQEAPPSPPPTRDAGSMP---SPPHQGEKSCPGAATTSEAAQIEQAPAPEVGS 690
TPK+PP + PSP P++ + P SPP P + S++ +P P VG+
Sbjct: 223 TPKTPPFPKTSPSPSPSQSPKANPPTVSPP----LPSPSPSVHSKSLSPASSPVPAVGT 387
>TC203407 weakly similar to UP|Q9ZT16 (Q9ZT16) Arabinogalactan-protein
(AtAGP4) (AT5g10430/F12B17_220), partial (50%)
Length = 966
Score = 44.7 bits (104), Expect = 2e-04
Identities = 39/116 (33%), Positives = 44/116 (37%), Gaps = 3/116 (2%)
Frame = +2
Query: 537 APKRRRLTRTSSGAGTSNPGAQPTTAAAPKGKNVAEASI---AAATEPTAVPASTPASAG 593
AP + T S S P PTT A P A+ AA P A P TPA A
Sbjct: 206 APSQPPTTTPSPPPPRSAPAPAPTTPATPPPATPPPAATPPPAATPPPAATP--TPAPAP 379
Query: 594 ATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPP 649
TAA SS A+ S T + S +TP G P P A P PP
Sbjct: 380 PTAAPTPASSPAASPPSPSPTVTPSPTSPNTPPG--------PSPGPSGSAEPPPP 523
Score = 43.9 bits (102), Expect = 4e-04
Identities = 40/132 (30%), Positives = 50/132 (37%), Gaps = 8/132 (6%)
Frame = +2
Query: 555 PGAQP-----TTAAAPKGKNV-AEASIAAATEPTAVP--ASTPASAGATAAVAAESSVGA 606
PGA P TT + P ++ A A AT P A P A+TP A A + A
Sbjct: 197 PGAAPSQPPTTTPSPPPPRSAPAPAPTTPATPPPATPPPAATPPPAATPPPAATPTPAPA 376
Query: 607 TAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEK 666
+A A+ AAS +P TP SP PP P P + P PP
Sbjct: 377 PPTAAPTPASSPAASPPSP-----SPTVTP-SPTSPNTPPGPSPGPSGSAEPPPPSAAFS 538
Query: 667 SCPGAATTSEAA 678
+ TS A
Sbjct: 539 ASKAFIATSALA 574
Score = 43.5 bits (101), Expect = 5e-04
Identities = 41/132 (31%), Positives = 48/132 (36%)
Frame = +2
Query: 549 GAGTSNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGATA 608
GA S P PTT +P A A A T P P +TP A AT AA AT
Sbjct: 200 GAAPSQP---PTTTPSPPPPRSAPAP--APTTPATPPPATPPPA-ATPPPAATPPPAATP 361
Query: 609 ASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKSC 668
A T A + +P +P SP P P G P P E
Sbjct: 362 TPAPAPPTAAPTPASSPAA-------SPPSPSPTVTPSPTSPNTPPGPSPGPSGSAEPPP 520
Query: 669 PGAATTSEAAQI 680
P AA ++ A I
Sbjct: 521 PSAAFSASKAFI 556
Score = 36.6 bits (83), Expect = 0.057
Identities = 27/99 (27%), Positives = 38/99 (38%)
Frame = +2
Query: 588 TPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPS 647
T S T + + GA + ++ + P + T SPP + P+
Sbjct: 86 THRSTATTTTFSLDMGSGAVQLFLILGLLASSCLAQAPGAAPSQPPTTTPSPPPPRSAPA 265
Query: 648 PPPTRDAGSMPSPPHQGEKSCPGAATTSEAAQIEQAPAP 686
P PT A P+ P + P AAT AA APAP
Sbjct: 266 PAPTTPATPPPATPPPA-ATPPPAATPPPAATPTPAPAP 379
Score = 29.3 bits (64), Expect = 9.1
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 5/100 (5%)
Frame = +2
Query: 590 ASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPP--- 646
+S A A AA S T S + A + TP P +PP PP
Sbjct: 176 SSCLAQAPGAAPSQPPTTTPSPPPPRSAPAPAPTTPA------TPPPATPPPAATPPPAA 337
Query: 647 SPPPTRDAGSMPSPPHQG--EKSCPGAATTSEAAQIEQAP 684
+PPP P+PP S P A+ S + + +P
Sbjct: 338 TPPPAATPTPAPAPPTAAPTPASSPAASPPSPSPTVTPSP 457
>TC220421 weakly similar to UP|GP1_CHLRE (Q9FPQ6) Vegetative cell wall
protein gp1 precursor (Hydroxyproline-rich glycoprotein
1), partial (13%)
Length = 1409
Score = 44.3 bits (103), Expect = 3e-04
Identities = 38/159 (23%), Positives = 64/159 (39%), Gaps = 3/159 (1%)
Frame = +3
Query: 553 SNPGAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGATAAS-- 610
S P P +A P A+ + + PTA P S S ++ + + S +TA S
Sbjct: 240 SPPSTMPPSATPPS----PSATSSPSASPTAPPTSPSPSPPSSPSPPSAPSPSSTAPSPP 407
Query: 611 AGVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKSCPG 670
+ T + S +P + SP + +P SP PT + S P P + P
Sbjct: 408 SASPPTSPSPSPPSPASTASANSPASGSPTSRTSPTSPSPT--STSKPPAPSSSSPA*PS 581
Query: 671 AATTSEAAQIEQAPAPEVGS-SSYYNMLPNAIEPSEFLL 708
+ + I P+P + +S+ ++ P + FLL
Sbjct: 582 SKPSPSPTPISPDPSPATSTPTSHTSISPITASKATFLL 698
Score = 42.0 bits (97), Expect = 0.001
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Frame = +3
Query: 576 AAATEPTAVPASTPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENET 635
A + T P++TP S AT++ +A + T+ S ++ + S+ +P + T
Sbjct: 234 APSPPSTMPPSATPPSPSATSSPSASPTAPPTSPSPSPPSSPSPPSAPSP-------SST 392
Query: 636 PKSPPHQEAPPSP---PPTRDAGSMPSPPHQGEKSCPGAATTSEAAQIEQAPAPEVGS-- 690
SPP P SP PP+ + + + P G + + T+ + PAP S
Sbjct: 393 APSPPSASPPTSPSPSPPSPASTASANSPASGSPTSRTSPTSPSPTSTSKPPAPSSSSPA 572
Query: 691 --SSYYNMLPNAIEP 703
SS + P I P
Sbjct: 573 *PSSKPSPSPTPISP 617
Score = 35.0 bits (79), Expect = 0.17
Identities = 25/93 (26%), Positives = 42/93 (44%)
Frame = +3
Query: 585 PASTPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPPHQEA 644
P+++P T A + S++ +A +AT + ++S P + +P S P +
Sbjct: 204 PSTSPPHR--TPAPSPPSTMPPSATPPSPSATSSPSAS--PTAPPTSPSPSPPSSPSPPS 371
Query: 645 PPSPPPTRDAGSMPSPPHQGEKSCPGAATTSEA 677
PSP T + SPP S P A+T+ A
Sbjct: 372 APSPSSTAPSPPSASPPTSPSPSPPSPASTASA 470
Score = 34.7 bits (78), Expect = 0.22
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = +3
Query: 629 KEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKSCPGAATTSEAAQIEQAPAPEV 688
K++ SPPH+ PSPP T + +PP S P A+ T A +P+P
Sbjct: 186 KQQPLNPSTSPPHRTPAPSPPSTMPPSA--TPPSPSATSSPSASPT--APPTSPSPSPPS 353
Query: 689 GSSSYYNMLPNAIEPS 704
S P++ PS
Sbjct: 354 SPSPPSAPSPSSTAPS 401
>AW101289
Length = 412
Score = 43.5 bits (101), Expect = 5e-04
Identities = 29/98 (29%), Positives = 44/98 (44%)
Frame = +3
Query: 581 PTAVPASTPASAGATAAVAAESSVGATAASAGVNATKAAASSDTPIGEKEKENETPKSPP 640
P P++TPA+ T++ A SS +T ++T + S P + TP SPP
Sbjct: 33 PWTAPSTTPATTSPTSSPPA-SSKSSTWTPTSFSSTTSQNSPPPP----SETTTTPSSPP 197
Query: 641 HQEAPPSPPPTRDAGSMPSPPHQGEKSCPGAATTSEAA 678
A P+ PT S P+PP AT++ A+
Sbjct: 198 PNTATPTSAPTSPHPSGPTPPSPSPSPAAPPATSTPAS 311
>AI444066 similar to GP|9294409|dbj polygalacturonase inhibitor-like protein
{Arabidopsis thaliana}, partial (27%)
Length = 336
Score = 43.1 bits (100), Expect = 6e-04
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Frame = +1
Query: 553 SNP-GAQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGATAASA 611
SNP PTTA + +G A+ A+ TA P ++P SA A S + A+
Sbjct: 22 SNPLSGSPTTAYSTRGPAPTAATTGTASPATATPTASPRSASAPVPSTPPSRSPSVLATC 201
Query: 612 GVNATKAAAS------SDTPIGEKEKENETPKSPPHQEAPPSPPP 650
V + + AS S +PIG + SPP + S P
Sbjct: 202 PVPSRRRFASSLTSPASSSPIGRESPARSRAASPPSSSSASSTSP 336
>TC211828 similar to UP|RPIA_ARATH (Q9ZU38) Probable-ribose 5-phosphate
isomerase (Phosphoriboisomerase) , partial (47%)
Length = 729
Score = 43.1 bits (100), Expect = 6e-04
Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 16/150 (10%)
Frame = +2
Query: 559 PTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGATA-----ASAGV 613
PT ++P K + A++T P P+S+P + + SS + A A A +
Sbjct: 278 PTPISSPPRK--PPWTPASSTPPPPPPSSSPKTTSRKSPPTRPSSTSSPAWSSASAPAPL 451
Query: 614 NATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKSCP---- 669
+T + AS+ + E K + PP PSP + S P+PP + P
Sbjct: 452 PSTPSTASASSSAKENSKTSSESPPPPKPTTRPSPSASPSPISTPTPPSISPSTAPTRSI 631
Query: 670 GAATTSEAA-------QIEQAPAPEVGSSS 692
++T+S AA + +APA SSS
Sbjct: 632 PSSTSSRAAAAPSFEKRWSRAPARSSSSSS 721
Score = 29.6 bits (65), Expect = 7.0
Identities = 20/70 (28%), Positives = 33/70 (46%)
Frame = +2
Query: 636 PKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKSCPGAATTSEAAQIEQAPAPEVGSSSYYN 695
P+ PP A +PPP + S + + + P ++T+S A APAP + S +
Sbjct: 299 PRKPPWTPASSTPPPPPPSSSPKTTSRKSPPTRP-SSTSSPAWSSASAPAPLPSTPSTAS 475
Query: 696 MLPNAIEPSE 705
+A E S+
Sbjct: 476 ASSSAKENSK 505
>TC226468 weakly similar to UP|O65450 (O65450) Glycine-rich protein, partial
(20%)
Length = 1041
Score = 43.1 bits (100), Expect = 6e-04
Identities = 40/138 (28%), Positives = 56/138 (39%), Gaps = 10/138 (7%)
Frame = -2
Query: 559 PTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGATAASAGVNATKA 618
PTT P + + ++ A T+P V AS P ++ ++V A +A K
Sbjct: 938 PTT---PTATSPSSSTPLAVTQPPTVVASPPTTSTPPTTSQPPANVAPKPAPVKPSAPKV 768
Query: 619 AASS-------DTPIGEKEKENETPKSPPHQEAPP--SPPPTRDAGSMPSPPHQGEKSCP 669
A +S PI + K +P SPP PP SPPP P+P P
Sbjct: 767 APASSPKAPPPQIPIPQPPK--PSPVSPPPLPPPPVASPPPLPPPKIAPTPAKTPPSPAP 594
Query: 670 GAATTSEA-AQIEQAPAP 686
AT + A A + AP P
Sbjct: 593 AKATPAPAPAPTKPAPTP 540
Score = 35.8 bits (81), Expect = 0.098
Identities = 36/134 (26%), Positives = 51/134 (37%), Gaps = 3/134 (2%)
Frame = -2
Query: 555 PGAQPTTAAAPKGKNVAEASIAAA---TEPTAVPASTPASAGATAAVAAESSVGATAASA 611
P PT A P A+A+ A A T+P P+ P AT A A V A A +
Sbjct: 641 PKIAPTPAKTPPSPAPAKATPAPAPAPTKPAPTPSPVPPPPAATPAPAPVIEVPAPAPAP 462
Query: 612 GVNATKAAASSDTPIGEKEKENETPKSPPHQEAPPSPPPTRDAGSMPSPPHQGEKSCPGA 671
+ A + + + HQ P+P PT S P+PP +S A
Sbjct: 461 VIEVPAPAPAHH----RHRRHRHRHRHRRHQA--PAPAPTIIRKSPPAPPDSTAES-DTA 303
Query: 672 ATTSEAAQIEQAPA 685
S + + AP+
Sbjct: 302 PAPSPSLNLNAAPS 261
Score = 30.4 bits (67), Expect = 4.1
Identities = 38/141 (26%), Positives = 55/141 (38%), Gaps = 11/141 (7%)
Frame = -2
Query: 557 AQPTTAAAPKGKNVAEASIAAATEPTAVPASTPASAGATAAVAAESSVGATAASAGVNAT 616
A P T + P + A++A P A A A + A + + + V+
Sbjct: 866 ASPPTTSTPPTTSQPPANVAPKPAPVKPSAPKVAPASSPKAPPPQIPIPQPPKPSPVSPP 687
Query: 617 KAA---ASSDTPIGEKEKENETPKSPPHQEAP------PSPPPTRDAGS-MPSPPHQGEK 666
+S P+ + K+PP AP P+P PT+ A + P PP
Sbjct: 686 PLPPPPVASPPPLPPPKIAPTPAKTPPSP-APAKATPAPAPAPTKPAPTPSPVPP----- 525
Query: 667 SCPGAATTSEAAQIE-QAPAP 686
P AAT + A IE APAP
Sbjct: 524 --PPAATPAPAPVIEVPAPAP 468
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.314 0.129 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,014,237
Number of Sequences: 63676
Number of extensions: 760676
Number of successful extensions: 13188
Number of sequences better than 10.0: 650
Number of HSP's better than 10.0 without gapping: 7512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10810
length of query: 1015
length of database: 12,639,632
effective HSP length: 107
effective length of query: 908
effective length of database: 5,826,300
effective search space: 5290280400
effective search space used: 5290280400
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0012a.7