TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0012a.3
         (952 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC220421 weakly similar to UP|GP1_CHLRE (Q9FPQ6) Vegetative cell...    46  9e-05
TC210384 weakly similar to UP|Q8VZF9 (Q8VZF9) AT5g12890/T24H18_6...    45  2e-04
TC215894 similar to UP|Q96569 (Q96569) L-lactate dehydrogenase  ...    45  2e-04
TC226993 homologue to UP|GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 deh...    44  3e-04
TC221561 homologue to UP|Q9ZPA0 (Q9ZPA0) Inosine monophosphate d...    44  3e-04
TC226995 similar to UP|GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehyd...    44  3e-04
TC228611 weakly similar to GB|CAA72487.1|1890317|ATP26A peroxida...    43  6e-04
TC210299 homologue to UP|EFT2_SOYBN (P46280) Elongation factor T...    43  8e-04
TC206203 UP|Q99366 (Q99366) DNA-directed RNA polymerase  (Fragme...    43  8e-04
TC226466 weakly similar to GB|AAD49970.1|5734705|F24J5 F24J5.4 {...    42  0.001
TC209655 similar to UP|Q8L844 (Q8L844) Crp1 protein-like, partia...    42  0.001
TC205203 similar to UP|Q39763 (Q39763) Proline-rich cell wall pr...    42  0.002
TC228448 weakly similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (4%)      41  0.003
TC216484 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabin...    40  0.004
TC230247 weakly similar to GB|AAP88326.1|32815835|BT009692 At1g6...    40  0.005
TC226231 similar to UP|Q8L9C3 (Q8L9C3) Copia-like retroelement p...    40  0.005
TC205204 homologue to UP|Q43558 (Q43558) Proline rich protein pr...    40  0.006
CO979270                                                               40  0.006
TC232895 weakly similar to PRF|1604369A.0|226743|1604369A sulfat...    40  0.006
TC226228 similar to UP|Q8L9C3 (Q8L9C3) Copia-like retroelement p...    40  0.006

>TC220421 weakly similar to UP|GP1_CHLRE (Q9FPQ6) Vegetative cell wall
           protein gp1 precursor (Hydroxyproline-rich glycoprotein
           1), partial (13%)
          Length = 1409

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 53/184 (28%), Positives = 70/184 (37%), Gaps = 7/184 (3%)
 Frame = +3

Query: 483 HSSNPLTPIPESQPAEQTTSPPH-----SPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTS 537
           H  +PL    + QP   +TSPPH     SP S+     P+  P      + PS S  PT+
Sbjct: 156 HHPHPLWTQNKQQPLNPSTSPPHRTPAPSPPSTM---PPSATPPSPSATSSPSAS--PTA 320

Query: 538 LLTIPYDPLSSEPIIHEQPEPNQTEPQ-PRTSDHSAPRASARPAARTTDTDSSTAFTPVS 596
             T P     S P     P P+ T P  P  S  ++P  S    A T   +S  + +P S
Sbjct: 321 PPTSPSPSPPSSPSPPSAPSPSSTAPSPPSASPPTSPSPSPPSPASTASANSPASGSPTS 500

Query: 597 FPINVVDSSPSNNSESIRKFMEVRKEKVSALEEYYLTCPSPRRYPGPRPERLVDPD-EPI 655
                  +SPS  S S          K  A        PS +  P P P   + PD  P 
Sbjct: 501 ---RTSPTSPSPTSTS----------KPPAPSSSSPA*PSSKPSPSPTP---ISPDPSPA 632

Query: 656 LANP 659
            + P
Sbjct: 633 TSTP 644



 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
 Frame = +3

Query: 484 SSNPLTPIPESQPAEQTTSPPHSPRSSF-FQPSPTEAPLWNLLQNQPSRSDEPTSLLTIP 542
           S+ P +P   S P+   T+PP SP  S    PSP  AP  +     P  +  PTS    P
Sbjct: 264 SATPPSPSATSSPSASPTAPPTSPSPSPPSSPSPPSAPSPSSTAPSPPSASPPTSPSPSP 443

Query: 543 YDPLSSEPIIHEQPEPNQTEPQPRTSDHS-APRASARPAARTTDTDS------STAFTPV 595
             P S+         P    P  RTS  S +P ++++P A ++ + +      S + TP+
Sbjct: 444 PSPASTA----SANSPASGSPTSRTSPTSPSPTSTSKPPAPSSSSPA*PSSKPSPSPTPI 611

Query: 596 SFPINVVDSSPSNNS 610
           S   +   S+P++++
Sbjct: 612 SPDPSPATSTPTSHT 656



 Score = 37.7 bits (86), Expect = 0.024
 Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 4/181 (2%)
 Frame = +3

Query: 420 QKKKKKVRIVVKPTRVEPAAEVVRRTEPPARVTRSSAHSSKPALTSDDDLNLFDALPISA 479
           Q K++ +     P    PA      T PP+    S + +S P+ +         A P S 
Sbjct: 180 QNKQQPLNPSTSPPHRTPAPSPPS-TMPPSATPPSPSATSSPSASPT-------APPTSP 335

Query: 480 LLQHSSNPLTPIPESQPAEQTT--SPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTS 537
                S P +P P S P+  +T  SPP +   +   PSP  +P      N P+ S  PTS
Sbjct: 336 ---SPSPPSSPSPPSAPSPSSTAPSPPSASPPTSPSPSP-PSPASTASANSPA-SGSPTS 500

Query: 538 LLTIPYDPLSSEPIIHEQPEPNQTEPQ-PRTSDHSAPR-ASARPAARTTDTDSSTAFTPV 595
             T P  P  S     + P P+ + P  P +    +P   S  P+  T+   S T+ +P+
Sbjct: 501 -RTSPTSP--SPTSTSKPPAPSSSSPA*PSSKPSPSPTPISPDPSPATSTPTSHTSISPI 671

Query: 596 S 596
           +
Sbjct: 672 T 674


>TC210384 weakly similar to UP|Q8VZF9 (Q8VZF9) AT5g12890/T24H18_60, partial
           (11%)
          Length = 860

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 44/134 (32%), Positives = 54/134 (39%), Gaps = 2/134 (1%)
 Frame = +3

Query: 485 SNPLTPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYD 544
           S  L P   S P  +T +P  SP +S F  S    P      NQPS+    TS       
Sbjct: 333 SPSLPPTTASLPTRRTPTP--SPTTSSFASSKPPPP-----SNQPSKPSSKTSSSKTKNI 491

Query: 545 PLSSEPIIHEQ-PEPNQTEPQPRTSDHSAPRASARPAARTTDTDSST-AFTPVSFPINVV 602
              S P      P P+       TS  +AP ASA PA   + T S T A TP S P  + 
Sbjct: 492 NF*SSPTSSSAGPPPSPRNSASSTSSSAAPPASASPATTPSGTISPTAASTPTSSPYRI- 668

Query: 603 DSSPSNNSESIRKF 616
             SP   S + R +
Sbjct: 669 --SPKRVSFTARSY 704


>TC215894 similar to UP|Q96569 (Q96569) L-lactate dehydrogenase  , complete
          Length = 1675

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 45/171 (26%), Positives = 69/171 (40%), Gaps = 6/171 (3%)
 Frame = +1

Query: 432 PTRVEPAAEVVRRTEPPARVTRSSAHSSKPALTSDDDLNLFDALPISALLQHSSNP--LT 489
           P+      E   R     R + +S+ SS P  TS            +A    SS P   +
Sbjct: 280 PSSAPATWEWPSRRPSSLRTSPTSSSSSTPTPTSS-----------AARCSTSSTPPPSS 426

Query: 490 PIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSS- 548
           P P S P     SPP +P S+   P+P  +P      +  S S   TS  + P  PLSS 
Sbjct: 427 PAPRSTPPPTPPSPP-APTSASSPPAPARSP-----ASHASTSSRGTSPSSAPLFPLSSV 588

Query: 549 ---EPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVS 596
                +    P P+ + P  R S  ++P  ++   A T    +S + +P++
Sbjct: 589 TPPTQLSSSFPTPSTSSPTSRGSSPASPPTASSAPAPTWTLPASVSSSPIT 741



 Score = 38.5 bits (88), Expect = 0.014
 Identities = 36/126 (28%), Positives = 49/126 (38%), Gaps = 2/126 (1%)
 Frame = +1

Query: 489 TPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPL-WNLLQNQPSR-SDEPTSLLTIPYDPL 546
           +P P S P    T+PP  PR S    SP+ AP  W     +PS     PTS  +    P 
Sbjct: 208 SPRPSSGP*---TTPPLPPRPSATTRSPSSAPATWEWPSRRPSSLRTSPTSSSSSTPTPT 378

Query: 547 SSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPINVVDSSP 606
           SS         P  + P PR++    P +   P      T +S+   P   P +   +S 
Sbjct: 379 SSAARCSTSSTPPPSSPAPRSTPPPTPPSPPAP------TSASSPPAPARSPASHASTSS 540

Query: 607 SNNSES 612
              S S
Sbjct: 541 RGTSPS 558



 Score = 35.4 bits (80), Expect = 0.12
 Identities = 51/209 (24%), Positives = 76/209 (35%), Gaps = 3/209 (1%)
 Frame = +1

Query: 561 TEPQPRTSDHSAPRASARPAARTTDTDSSTAF--TPVSFPINVVDSSPSNNSESIRKFME 618
           T P+P +   + P    RP+A T    S+ A    P   P ++  S  S++S +      
Sbjct: 205 TSPRPSSGP*TTPPLPPRPSATTRSPSSAPATWEWPSRRPSSLRTSPTSSSSSTPTPTSS 384

Query: 619 VRKEKVSALEEYYLTCPSPRRYPGPRPERLVDPDEPILA-NPIQEADPLVQQAHPVPDQQ 677
             +   S+      + P+PR  P P P     P  P  A +P   A      A       
Sbjct: 385 AARCSTSSTPP--PSSPAPRSTPPPTPP---SPPAPTSASSPPAPARSPASHASTSSRGT 549

Query: 678 EPIQPDPEPEQSVSNQSSVRSPHPLVETSDPHLGTSEPNAPMINIGSPQGASEAHSSNHP 737
            P      P  SV+  + + S  P   TS P   TS  ++P     SP  AS A      
Sbjct: 550 SPSSAPLFPLSSVTPPTQLSSSFPTPSTSSP---TSRGSSP----ASPPTASSA------ 690

Query: 738 ASPAPNLSIIPYTHLQPTSLSECINIFYH 766
             PAP  ++       P +L+     + H
Sbjct: 691 --PAPTWTLPASVSSSPITLTSTPRTYRH 771


>TC226993 homologue to UP|GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase
           (GDP-D-mannose dehydratase) (GMD) , partial (94%)
          Length = 1388

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 38/132 (28%), Positives = 53/132 (39%), Gaps = 17/132 (12%)
 Frame = +2

Query: 484 SSNPLTPIPESQPAEQT-TSPPHSPRS--SFFQPSPTEAPLWNLLQNQPSRSDE------ 534
           S+ P++P P    A  T +SP  S  S  S   PSP+  P      + P+ S        
Sbjct: 314 STTPISPTPPPSAAGSTPSSPTRSTTSPLSLTSPSPSRYPTTPPTSSPPAPSASSRPSVP 493

Query: 535 -------PTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASAR-PAARTTDT 586
                  PTS  T P  P  S P +   P+P  + P P T   +AP        AR T +
Sbjct: 494 TSPPPAAPTSATTKPAPPRCSAPPLRRSPKPPPSTPAPPTPPPNAPPTGTP*TTARLTPS 673

Query: 587 DSSTAFTPVSFP 598
             +TA +  + P
Sbjct: 674 SPATASSSTTSP 709



 Score = 34.7 bits (78), Expect = 0.20
 Identities = 51/178 (28%), Positives = 61/178 (33%), Gaps = 1/178 (0%)
 Frame = +2

Query: 565 PRTSDHSAPRASAR-PAARTTDTDSSTAFTPVSFPINVVDSSPSNNSESIRKFMEVRKEK 623
           PRTS  SA   S   P   T    SST     + P +   S+PS+ + S    +      
Sbjct: 239 PRTSTRSASTTSMWIPTTPTRPA*SSTTPISPTPPPSAAGSTPSSPTRSTTSPLS----- 403

Query: 624 VSALEEYYLTCPSPRRYPGPRPERLVDPDEPILANPIQEADPLVQQAHPVPDQQEPIQPD 683
                   LT PSP RYP   P     P     + P     P    A P     +P  P 
Sbjct: 404 --------LTSPSPSRYP-TTPPTSSPPAPSASSRPSVPTSP--PPAAPTSATTKPAPP- 547

Query: 684 PEPEQSVSNQSSVRSPHPLVETSDPHLGTSEPNAPMINIGSPQGASEAHSSNHPASPA 741
                  S     RSP P   T  P   T  PNAP      P G     +   P+SPA
Sbjct: 548 -----RCSAPPLRRSPKPPPSTPAP--PTPPPNAP------PTGTP*TTARLTPSSPA 682


>TC221561 homologue to UP|Q9ZPA0 (Q9ZPA0) Inosine monophosphate dehydrogenase,
            complete
          Length = 2001

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 4/148 (2%)
 Frame = -1

Query: 549  EPIIHEQPEPNQTEPQPRT-SDHS--APRASARPAARTTDTDSSTAFTPVSFPINVVDSS 605
            +P  H QP+P +++ QP T S HS  + +A  +P++ T+ + +    +P ++P     + 
Sbjct: 1122 QPSTH-QPQP-ESDSQPGT*SQHSPQSHQAQGKPSSHTSPSLTDKLSSPENYPTLQHSTQ 949

Query: 606  PSNNSESIRKFMEVRKEKVSALEEYYLTCPSPRRYP-GPRPERLVDPDEPILANPIQEAD 664
            PS N+ +                 Y+L    PR  P  PRP     P  P+  NP     
Sbjct: 948  PSPNAPT---------------SPYHLPSSPPRPPP*TPRPPP-PSPAPPVSGNPSPSPP 817

Query: 665  PLVQQAHPVPDQQEPIQPDPEPEQSVSN 692
            P      P P  Q+P  P P+P+   S+
Sbjct: 816  P------PSPPNQQPHHPSPKPQHHFSH 751


>TC226995 similar to UP|GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase
           (GDP-D-mannose dehydratase) (GMD) , partial (59%)
          Length = 679

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 40/134 (29%), Positives = 52/134 (37%), Gaps = 23/134 (17%)
 Frame = +3

Query: 484 SSNPLTPIPE--------SQPAEQTTSPPHSPRSSFFQPSPTEAPLWN----------LL 525
           S+ P++P P         S P   TTSPP SP S     SPT  P  +          + 
Sbjct: 213 STTPISPTPPPSAAGSTPSSPTRSTTSPP-SPTSPTHSRSPTTPPTSSPPAPSAYSRPIA 389

Query: 526 QNQPSRSDEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPR-----ASARPA 580
              P+ +  PTS  T P  P  S P +    +P    P P T   +AP       +ARP 
Sbjct: 390 PTSPTTA-APTSATTKPAPPRCSAPPLRRNRKPLACTPAPHTPAANAPTTGTP*TTARPT 566

Query: 581 ARTTDTDSSTAFTP 594
             +  T SS    P
Sbjct: 567 PSSPATASSLTNDP 608


>TC228611 weakly similar to GB|CAA72487.1|1890317|ATP26A peroxidase ATP26a
           {Arabidopsis thaliana;} , partial (49%)
          Length = 731

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 59/233 (25%), Positives = 79/233 (33%), Gaps = 7/233 (3%)
 Frame = +3

Query: 373 FPSPPKRKAQRKMVLDESSEESDVPLVKKTKRK---PDDGDDDDSEDGPPQKKKKKVRIV 429
           F +PP R         +S   S   LV+ + R    P       +   PP +        
Sbjct: 66  FSAPPTR---------DSPWTSTRTLVRSSARS*GTPSQASRSPAPPPPPPRSASSSTTA 218

Query: 430 VKPTRVEPAAEVVRRTEPPARVTRSSAHSSKPALTSDDDLNLFDALPISALLQHSSNPLT 489
             PT V P +    R  P    T +S  S  PA  S                  SS P  
Sbjct: 219 SSPTAVTPPSSSPPRPSPGPSATPTST-SPSPATPSTS----------------SSAPRP 347

Query: 490 PIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSD----EPTSLLTIPYDP 545
           P+  S PA     P  SP  +F  P P  +   +   + PS S     EP S    PY P
Sbjct: 348 PL--SSPA-----PTPSPAPTFSPPPPATSSPCSAAPSSPSSSAAATAEPPS--PPPYPP 500

Query: 546 LSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFP 598
            S  P       PN +      S +S+P     P+   T   SS+  +P + P
Sbjct: 501 TSPPPPCPSLKSPNSSPNAASPSKNSSPSVGPTPSDSLT-APSSSRTSPTTLP 656


>TC210299 homologue to UP|EFT2_SOYBN (P46280) Elongation factor Tu,
           chloroplast precursor (EF-Tu), complete
          Length = 1615

 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
 Frame = +2

Query: 476 PISALLQHSSNP--LTPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSD 533
           PI + L+ ++ P   +P+P S P + +TSP  +P  +   PSP+  P  +     P+ + 
Sbjct: 80  PIISSLKPTNPPPHTSPLPSSTPPQSSTSPLPTPPPA-AAPSPSAPPAASSSARSPTSTS 256

Query: 534 EPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFT 593
            P++  T    P  S P       P+   P   T+  + P  SA  A+ +T   S+T   
Sbjct: 257 APSATSTTVRPP--SPPPSPWPSPPSAIVPLKNTTRSTPPPRSAPAASPSTPPPSNTRPR 430

Query: 594 PVSFPINVVDSSPSNN 609
             + P +   ++P+ +
Sbjct: 431 TATTPTSTAPATPTTS 478


>TC206203 UP|Q99366 (Q99366) DNA-directed RNA polymerase  (Fragment) , partial
            (96%)
          Length = 2604

 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 67/255 (26%), Positives = 88/255 (34%), Gaps = 8/255 (3%)
 Frame = +1

Query: 494  SQPAEQTTSPPHSPRSSFFQP-SPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSSEPII 552
            S P    TSP +SP S  + P SPT +P      + P  S  PTS    P  P  S    
Sbjct: 1138 SSPGYSPTSPGYSPTSPGYSPTSPTYSP------SSPGYS--PTSPAYSPTSPSYSPTSP 1293

Query: 553  HEQP-EPNQTEPQPRTSDHSAPRASARPAARTTD---TDSSTAFTPVSFPINVVDSSPSN 608
               P  P+ +   P  S  S   +   PA   T    + +S A++P S   +    S S 
Sbjct: 1294 SYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSP 1473

Query: 609  NSESIRKFMEVRKEKVSALEEYYLTCPSPRRYPGPRPERLVDPDEPILANPIQEADPLVQ 668
             S S                 Y  T PS   Y    P     P  P  +       P   
Sbjct: 1474 TSPS-----------------YSPTSPS---YSPTSPS--YSPTSPAYSPTSPGYSPTSP 1587

Query: 669  QAHPVPDQQEPIQPDPEPEQSVSNQSSVRSP-HPLVETSDPHLGTSEPNAPMINIGSPQG 727
               P      P  P   P+ +  + S   SP  P +  S P+  TS   +P     SP  
Sbjct: 1588 SYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTS 1767

Query: 728  ASEAHSS--NHPASP 740
             S + SS    P+SP
Sbjct: 1768 PSYSPSSPTYSPSSP 1812



 Score = 35.4 bits (80), Expect = 0.12
 Identities = 54/233 (23%), Positives = 79/233 (33%), Gaps = 9/233 (3%)
 Frame = +1

Query: 476  PISALLQHSSNPLTPIPESQPAEQTTSPPHSPRSSFFQP-SPTEAPLWNLLQNQPSRSDE 534
            P S     SS   +P   + PA   TSP +SP S  + P SP+ +P  +   +  S S  
Sbjct: 1198 PTSPTYSPSSPGYSP---TSPAYSPTSPSYSPTSPSYSPTSPSYSPT-SPSYSPTSPSYS 1365

Query: 535  PTSLLTIPYDPLSSEPIIHEQP-EPNQTEPQPRTSDHSAPRASARPAARTTD---TDSST 590
            PTS    P  P  S       P  P+ +   P  S  S   +   P+   T    + +S 
Sbjct: 1366 PTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1545

Query: 591  AFTPVSFPINVVDSSPSNNSESIRKFMEVRKEKVSALEEYYLTCPSPRRYPGPRPERLVD 650
            A++P S   +    S S  S S          + +         PS  R     P     
Sbjct: 1546 AYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTS 1725

Query: 651  PDEPILANPIQEADPLVQQAHPVPDQQEP----IQPDPEPEQSVSNQSSVRSP 699
            P+    +       P    + P      P    + PD  P     + S+  SP
Sbjct: 1726 PNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSP 1884



 Score = 29.3 bits (64), Expect = 8.6
 Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
 Frame = +1

Query: 486  NPLTPIPESQPAEQTTSPPHSPRSSFFQP-SPTEAPLWNLLQNQPSRSDEPTSLLTIPYD 544
            +P +P   + P    TSP +SP S  + P SPT +P           S    S ++  Y 
Sbjct: 1696 SPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSP-----------SSPYNSGVSPDYS 1842

Query: 545  PLSSEPIIHEQPEPNQTEPQPRTSDHSAPRAS 576
            P S +        P+Q    P ++    P+ S
Sbjct: 1843 PSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTS 1938


>TC226466 weakly similar to GB|AAD49970.1|5734705|F24J5 F24J5.4 {Arabidopsis
           thaliana;} , partial (22%)
          Length = 978

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 9/203 (4%)
 Frame = +1

Query: 418 PPQKKKKKVRIVVKPTRVEPAAEVVRRTEPPARVTRSSAHSSKPALTSDDDLNLFDALPI 477
           PP   +    +  KP  V P A  V     P   T  +     P ++      L   LP 
Sbjct: 175 PPTISQPPAIVAPKPAPVTPPAPKVAPASSPKAPTPQTPPPQPPKVSPVAAPTLPPPLPP 354

Query: 478 SALLQHSSNPLTPIPESQPAEQTTSPPHSPRSSF-------FQPSPTEAPLWNLLQNQPS 530
             +   ++ P  P P+  P    TSP  +P  +         +P+PT AP+       P 
Sbjct: 355 PPV---ATPPPLPPPKIAPTPAKTSPAPAPAKATPAPAPAPTKPAPTPAPI------PPP 507

Query: 531 RSDEPTSLLTIPYD-PLSSEPIIHEQPEPNQTEPQPR-TSDHSAPRASARPAARTTDTDS 588
            +  PT ++ +P   P S +   H         P P  T  H +P A   P   T ++D+
Sbjct: 508 PTLAPTPIVEVPAPAPSSHKHRRHRHRHKRHQAPAPAPTVIHKSPPA---PPDSTAESDT 678

Query: 589 STAFTPVSFPINVVDSSPSNNSE 611
               TP   P   ++++PSN+ +
Sbjct: 679 ----TPAPSPSLNLNAAPSNHQQ 735



 Score = 35.4 bits (80), Expect = 0.12
 Identities = 49/241 (20%), Positives = 80/241 (32%), Gaps = 3/241 (1%)
 Frame = +1

Query: 516 PTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRA 575
           P  +P   L    PS S  P ++      P +S P    QP P    P+P      AP+ 
Sbjct: 76  PANSPPTTLAATSPS-SGTPPAVTQAASPPTTSNPPTISQP-PAIVAPKPAPVTPPAPKV 249

Query: 576 SARPAARTTDTDSSTAFTPVSFPINVVDSSPSNNSESIRKFMEVRKEKVSALEEYYLTCP 635
           +   + +     +     P   P+      P      +     +   K++         P
Sbjct: 250 APASSPKAPTPQTPPPQPPKVSPVAAPTLPPPLPPPPVATPPPLPPPKIAPTPAKTSPAP 429

Query: 636 SPRRY---PGPRPERLVDPDEPILANPIQEADPLVQQAHPVPDQQEPIQPDPEPEQSVSN 692
           +P +    P P P +      PI   P     P+V+   P P          +  +    
Sbjct: 430 APAKATPAPAPAPTKPAPTPAPIPPPPTLAPTPIVEVPAPAPSSH-------KHRRHRHR 588

Query: 693 QSSVRSPHPLVETSDPHLGTSEPNAPMINIGSPQGASEAHSSNHPASPAPNLSIIPYTHL 752
               ++P P      P +    P AP      P   +E+ ++  P SP+ NL+  P  H 
Sbjct: 589 HKRHQAPAPA-----PTVIHKSPPAP------PDSTAESDTTPAP-SPSLNLNAAPSNHQ 732

Query: 753 Q 753
           Q
Sbjct: 733 Q 735


>TC209655 similar to UP|Q8L844 (Q8L844) Crp1 protein-like, partial (32%)
          Length = 832

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 40/132 (30%), Positives = 57/132 (42%), Gaps = 6/132 (4%)
 Frame = +1

Query: 487 PLTPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQN--QP-SRSDEPTSLLTIPY 543
           P T  P +  A  TTSPP SP S   +P PT  P   L  +  QP S S  PT+   +  
Sbjct: 34  PTTSSPSTTAA--TTSPPSSPSSPTHRPLPTRTPTQPLPPHSAQPSSNSPSPTAPSRLHS 207

Query: 544 DPLSSEPIIHEQPEPNQTEPQ---PRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPIN 600
              SS P     P      P     R +  ++P +S+ P++ T      ++  P S+  +
Sbjct: 208 GTRSSSPSAPPPPPSPSRTPSFHGSRNTISASPTSSSTPSSSTPSAAPKSSTKP-SYSPS 384

Query: 601 VVDSSPSNNSES 612
           V  S PS  + S
Sbjct: 385 VRSSLPSPTTRS 420



 Score = 34.7 bits (78), Expect = 0.20
 Identities = 45/192 (23%), Positives = 69/192 (35%), Gaps = 12/192 (6%)
 Frame = +1

Query: 418 PPQKKKKKVRIVVKPTRVEPAAEVVRRTEPPARVTRSSAHSSKPALTSDDDLNLFDALPI 477
           P Q   KK      PT   P+      T PP+  + S  H   P  T           P 
Sbjct: 7   PNQSSSKKA-----PTTSSPSTTAAT-TSPPSSPS-SPTHRPLPTRT-----------PT 132

Query: 478 SALLQHSSNPL--TPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLW----NLLQNQPSR 531
             L  HS+ P   +P P +     + +   SP +    PSP+  P +    N +   P+ 
Sbjct: 133 QPLPPHSAQPSSNSPSPTAPSRLHSGTRSSSPSAPPPPPSPSRTPSFHGSRNTISASPTS 312

Query: 532 SDEPTSLLTIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASAR------PAARTTD 585
           S  P+S         S++P        +   P  R+S  +   A++R      P    T 
Sbjct: 313 SSTPSSSTPSAAPKSSTKPSYSPSVRSSLPSPTTRSSARAPETATSRKP*T*CPKCAATV 492

Query: 586 TDSSTAFTPVSF 597
           T  +++ T  SF
Sbjct: 493 TSRTSSTTAPSF 528


>TC205203 similar to UP|Q39763 (Q39763) Proline-rich cell wall protein,
           partial (48%)
          Length = 1076

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 30/119 (25%), Positives = 45/119 (37%), Gaps = 2/119 (1%)
 Frame = +3

Query: 484 SSNPLTPIPESQPAEQTTSPPHSPRS--SFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTI 541
           S++P  P P++ P    +SPP  P S      P P   P  + L + P  S  P+S    
Sbjct: 279 STSPAPPTPQASPPPVQSSPPPVPSSPPPSQSPPPASTPPPSPLSSPPPSSPPPSSPPPS 458

Query: 542 PYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPIN 600
              P S  P       P  + P P +    +P  +  P A         + TP   P++
Sbjct: 459 SPPPASPPPSSPPPASPPPSSPPPSSPPPFSPPPATPPPATPPPAVPPPSLTPTVTPLS 635



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 40/147 (27%), Positives = 59/147 (39%), Gaps = 7/147 (4%)
 Frame = +3

Query: 437 PAAEVVRRTEPPARVTRSSAHSSKPALTSDDDLNLFDALPISALLQHSSNPLTPIPESQP 496
           PA    + + PP + +     SS P   S    +     P+S+    S  P +P P S P
Sbjct: 288 PAPPTPQASPPPVQSSPPPVPSSPPPSQSPPPASTPPPSPLSSPPPSSPPPSSPPPSSPP 467

Query: 497 AEQ---TTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSL----LTIPYDPLSSE 549
                 ++ PP SP  S   P P+  P ++     P  +  P ++    LT    PLSS 
Sbjct: 468 PASPPPSSPPPASPPPS--SPPPSSPPPFSPPPATPPPATPPPAVPPPSLTPTVTPLSSP 641

Query: 550 PIIHEQPEPNQTEPQPRTSDHSAPRAS 576
           P+    P P++    P  S   AP  S
Sbjct: 642 PVSSPAPSPSKVF-APALSPSLAPGPS 719



 Score = 33.1 bits (74), Expect = 0.60
 Identities = 33/125 (26%), Positives = 44/125 (34%), Gaps = 1/125 (0%)
 Frame = +3

Query: 635 PSPRRYPGPRPERLVDPDEPILANPIQEADPLVQQAHPVPDQQEPIQPDP-EPEQSVSNQ 693
           P P   P P P     P  P  ++P   + P    A P P    P  P P  P  S    
Sbjct: 375 PPPASTPPPSPLSSPPPSSPPPSSPPPSSPP---PASPPPSSPPPASPPPSSPPPSSPPP 545

Query: 694 SSVRSPHPLVETSDPHLGTSEPNAPMINIGSPQGASEAHSSNHPASPAPNLSIIPYTHLQ 753
            S     P   T  P +        +  + SP  +S A S +   +PA + S+ P   L 
Sbjct: 546 FSPPPATPPPATPPPAVPPPSLTPTVTPLSSPPVSSPAPSPSKVFAPALSPSLAPGPSLS 725

Query: 754 PTSLS 758
             S S
Sbjct: 726 TISPS 740


>TC228448 weakly similar to UP|Q6VBJ4 (Q6VBJ4) Epa5p, partial (4%)
          Length = 458

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
 Frame = +1

Query: 484 SSNPLTPIPE-----SQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSL 538
           S +PL P P      + P+  T +PP SP S   +PSP          N P     P  L
Sbjct: 109 SPSPLKP*PYPHSNLASPSGPTPNPPFSPTS---KPSPAPRSSPPSRSNSPPPHVPPLRL 279

Query: 539 LTIPYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRAS-ARPAARTT-DTDSSTAFTPVS 596
           L+ P    +S         P  ++P PR S  S+P +S +  +ARTT  + SS+A +P S
Sbjct: 280 LSKPTTASTSRS--PSPLSPTSSKPTPRPSPRSSPSSSRSSSSARTTRRSPSSSASSPRS 453


>TC216484 similar to UP|FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan
           protein 1 precursor, partial (58%)
          Length = 1213

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 50/201 (24%), Positives = 69/201 (33%), Gaps = 16/201 (7%)
 Frame = +1

Query: 400 KKTKRKPDDGDDDDSEDGPPQKKKKKVRIVVKPTRVEPAAEVVRRTEPPARVTRSSAHSS 459
           + T   P       S   PP+   K        T   P      R+ PP+  +R+S+ S+
Sbjct: 133 QSTPSSPPSTTTSPSPTSPPKSTAKPPSPSAPSTT--PPCRTFSRSTPPSTPSRTSSPST 306

Query: 460 KPALTSDDDLNLFDALPISALLQHSSNPLTP------IPESQPAEQTTSPPHSPRSSFFQ 513
             + TS          P S+    ++ P  P       P   P   +TSP  +   S   
Sbjct: 307 SSSTTS---------APRSSTRSPTAPPSPPQCTKPPAPPPDPPASSTSPTSTAEKSHSP 459

Query: 514 PSPTEAPLWNLLQNQPSRSDEP--TSLLT------IPYDPLSSEPIIHEQPEPNQTEPQ- 564
           P  T A       + P RS  P   SL T        + PL     +H  P PN+T P  
Sbjct: 460 PKTTTA-------HSPQRSSNP*KKSLTTSQ*SRSAKFSPLPQRKPLHPHP-PNKTSPTL 615

Query: 565 -PRTSDHSAPRASARPAARTT 584
              T   S+P  S     R T
Sbjct: 616 CQNTDARSSPTLSLLNPTRLT 678



 Score = 30.0 bits (66), Expect = 5.0
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +2

Query: 368  PPAPEFPSPPKRKAQRKMVLDESSEESDVPLVKKTKRKPDDGDDDDSED 416
            P A + P+P K   ++K   D  +++SD P        PDD  D  ++D
Sbjct: 1067 PSAADAPAPAKNGKKKKKAADAPADDSDAP-----ADSPDDAADVTADD 1198


>TC230247 weakly similar to GB|AAP88326.1|32815835|BT009692 At1g61870
           {Arabidopsis thaliana;} , partial (56%)
          Length = 1291

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 38/122 (31%), Positives = 55/122 (44%), Gaps = 3/122 (2%)
 Frame = +1

Query: 489 TPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSS 548
           TP P S P    T PP  P+S       T +        +P+RS   TS +  P  PL+ 
Sbjct: 55  TPPPPSSPR---THPPP*PQSKKPAAPSTSS------NRRPTRSASSTSAVPPP-SPLTL 204

Query: 549 EPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSS--TAFTPVSFPI-NVVDSS 605
                  P P+ + P P TS  SAP ++    A T+ T +S  T  +  + PI ++  S+
Sbjct: 205 TSTAVPSPLPSPSSPPPTTSPASAPSSTISKPAPTSATKNSSPTPSSSTARPICSITPSA 384

Query: 606 PS 607
           PS
Sbjct: 385 PS 390



 Score = 36.6 bits (83), Expect = 0.054
 Identities = 41/164 (25%), Positives = 61/164 (37%), Gaps = 2/164 (1%)
 Frame = +1

Query: 418 PPQKKKKKVRIVVKPTRVEPAAEVVRRTEPPARVTRSSAHSSKPALTSDDDLNLFDALPI 477
           PP     +      P   +PAA        P R   +S+ S+ P              P 
Sbjct: 58  PPPPSSPRTHPPP*PQSKKPAAPSTSSNRRPTR--SASSTSAVP--------------PP 189

Query: 478 SALLQHSSNPLTPIPESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTS 537
           S L   S+   +P+P       TTSP  +P S+  +P+PT A   +      S +    S
Sbjct: 190 SPLTLTSTAVPSPLPSPSSPPPTTSPASAPSSTISKPAPTSATKNSSPTPSSSTARPICS 369

Query: 538 LLTIPYDPLSSEPIIHEQP-EPNQTEP-QPRTSDHSAPRASARP 579
           +      P +S P+   +P  P+   P  PRT+  S    S  P
Sbjct: 370 ITPSAPSPKTSPPLAPSKP*IPSSLLPSSPRTTKSSLESTSNSP 501


>TC226231 similar to UP|Q8L9C3 (Q8L9C3) Copia-like retroelement pol
           polyprotein, partial (97%)
          Length = 1375

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 10/149 (6%)
 Frame = +1

Query: 802 QVPIMMQLLHAEGS----QSIEAAKQRFARRVALHE---LEQRNKLLEAIEEAKRKKEQA 854
           Q+ I  Q++  EG+    ++++A +   A   A+ +   ++  +K ++ I E     +Q 
Sbjct: 397 QLRIHDQMIMLEGAKATTETVDALRTGAAAMRAMQKETNIDDVDKTMDEINEQTENMKQI 576

Query: 855 EEAARQ---AAAQAEQARLEAERLEAEAEALRCQALAPVVFTPAASASIPDPQAAQNVPS 911
           +EA      AAA  ++  LEAE  E E   L  Q L P    PAA   +P         S
Sbjct: 577 QEALSTPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPVHVPAGWQPTRPVS 756

Query: 912 SSTQTSSSRLDIMEQRLDTHESMLIEMKH 940
           S        L  ++  +    S   +++H
Sbjct: 757 SKPTAEEDELAALQAEMAL*ASPFSQLRH 843


>TC205204 homologue to UP|Q43558 (Q43558) Proline rich protein precursor,
           partial (44%)
          Length = 996

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 40/162 (24%), Positives = 56/162 (33%), Gaps = 2/162 (1%)
 Frame = +1

Query: 484 SSNPLTPIPESQPAEQTTSPPHSPRS--SFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTI 541
           S++P  P P+S P    +SPP  P S      P P   P    L + P  S  P+S    
Sbjct: 187 STSPAPPTPQSSPPPIQSSPPPVPSSPPPAQSPPPASTPPPAPLSSPPPASPPPSS---- 354

Query: 542 PYDPLSSEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPINV 601
              P S  P       P    P P +   ++P  +  P A         A  P + P   
Sbjct: 355 -PPPASPPPASPPPASPPPASPPPASPPPASPPPATPPPASPPPFSPPPATPPPATPPPA 531

Query: 602 VDSSPSNNSESIRKFMEVRKEKVSALEEYYLTCPSPRRYPGP 643
           +  +P ++  +        K    AL        SP   PGP
Sbjct: 532 LTPTPLSSPPATSPAPAPAKVVAPAL--------SPSLAPGP 633



 Score = 35.4 bits (80), Expect = 0.12
 Identities = 41/166 (24%), Positives = 53/166 (31%)
 Frame = +1

Query: 437 PAAEVVRRTEPPARVTRSSAHSSKPALTSDDDLNLFDALPISALLQHSSNPLTPIPESQP 496
           PA    + + PP + +     SS P   S    +     P+S+    S  P +P P S P
Sbjct: 196 PAPPTPQSSPPPIQSSPPPVPSSPPPAQSPPPASTPPPAPLSSPPPASPPPSSPPPASPP 375

Query: 497 AEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSSEPIIHEQP 556
               + PP SP  +   P P   P                        P S  P      
Sbjct: 376 --PASPPPASPPPA--SPPPASPP------------------------PASPPPATPPPA 471

Query: 557 EPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTPVSFPINVV 602
            P    P P T     P A+  PA   T   S  A +P   P  VV
Sbjct: 472 SPPPFSPPPAT----PPPATPPPALTPTPLSSPPATSPAPAPAKVV 597



 Score = 30.4 bits (67), Expect = 3.9
 Identities = 30/125 (24%), Positives = 39/125 (31%), Gaps = 1/125 (0%)
 Frame = +1

Query: 635 PSPRRYPGPRPERLVDPDEPILANPIQEADPLVQQAHPVPDQQEPIQPDPEPEQSVSNQS 694
           P P   P P P     P  P  ++P   + P        P    P    P P        
Sbjct: 283 PPPASTPPPAPLSSPPPASPPPSSPPPASPPPASPPPASPPPASPPPASPPPASPPPATP 462

Query: 695 SVRSPHPL-VETSDPHLGTSEPNAPMINIGSPQGASEAHSSNHPASPAPNLSIIPYTHLQ 753
              SP P     + P   T  P      + SP   S A +     +PA + S+ P   L 
Sbjct: 463 PPASPPPFSPPPATPPPATPPPALTPTPLSSPPATSPAPAPAKVVAPALSPSLAPGPSLS 642

Query: 754 PTSLS 758
             S S
Sbjct: 643 TISPS 657



 Score = 30.4 bits (67), Expect = 3.9
 Identities = 27/86 (31%), Positives = 31/86 (35%), Gaps = 2/86 (2%)
 Frame = +1

Query: 659 PIQEADPLVQQAHPVPDQQEP--IQPDPEPEQSVSNQSSVRSPHPLVETSDPHLGTSEPN 716
           P     P   Q+ P P Q  P  +   P P QS    +S   P PL          S P 
Sbjct: 184 PSTSPAPPTPQSSPPPIQSSPPPVPSSPPPAQSPP-PASTPPPAPLSSPPPASPPPSSPP 360

Query: 717 APMINIGSPQGASEAHSSNHPASPAP 742
                  SP  AS   +S  PASP P
Sbjct: 361 PASPPPASPPPASPPPASPPPASPPP 438


>CO979270 
          Length = 837

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 41/156 (26%), Positives = 58/156 (36%), Gaps = 12/156 (7%)
 Frame = +3

Query: 436 EPAAEVVRR-TEPPARVTRSSAHSSKPALTSDDDLNLFDALPISALLQHSSNPLTPIPES 494
           E A  V ++ T  P   T+ S +     L        FD+   SA L   S  L  +P  
Sbjct: 258 EQAKRVTKQGTSYPTPATKGSTNEQHSQLLFRPCGKFFDSPGASAALTMPSQKLLSLPHL 437

Query: 495 QPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLSSEPIIHE 554
                 ++P H+P      PSP+     ++L+ +P            P  P S      E
Sbjct: 438 SHLTF*SNPEHTP----IPPSPSSPSRCSILRRKP------------PSPPQS------E 551

Query: 555 QPEPNQTEPQ-----------PRTSDHSAPRASARP 579
           QPEP+ + PQ           P   DH  P A+A P
Sbjct: 552 QPEPHNSAPQQASEQNLHPQEPHQLDHFQPNAAASP 659



 Score = 29.3 bits (64), Expect = 8.6
 Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
 Frame = +3

Query: 632 LTCPSPRRYPGPRPERLV---DPDE-PILANPIQEAD-PLVQQAHPVPDQQEPIQPDPEP 686
           LT PS +    P    L    +P+  PI  +P   +   ++++  P P Q E     PEP
Sbjct: 396 LTMPSQKLLSLPHLSHLTF*SNPEHTPIPPSPSSPSRCSILRRKPPSPPQSE----QPEP 563

Query: 687 EQSVSNQSSVRSPHPLVETSDPH-LGTSEPNAPMINIGSPQGASEAHSSNHPASPAPNLS 745
             S   Q+S ++ HP     +PH L   +PNA      SPQ   ++   +   S + N  
Sbjct: 564 HNSAPQQASEQNLHP----QEPHQLDHFQPNA----AASPQPLQDSEFDSLNPSNSSNTQ 719

Query: 746 I 746
           +
Sbjct: 720 L 722


>TC232895 weakly similar to PRF|1604369A.0|226743|1604369A sulfated surface
           glycoprotein SSG185. {Volvox carteri;} , partial (14%)
          Length = 907

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 30/104 (28%), Positives = 43/104 (40%), Gaps = 4/104 (3%)
 Frame = +3

Query: 492 PESQPAEQTTSPPHSPRSSF----FQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLS 547
           P S P   T  PP SP SS       P PT +P      ++P+ S    S    P    S
Sbjct: 252 PSSPPRRNTPPPPPSPSSSTPLRPSSPPPTTSPTSR--PSRPTPSSPSPSTAPAPAPTTS 425

Query: 548 SEPIIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTA 591
           + P    + +   T P P T    +PR   RP++  T +  +T+
Sbjct: 426 TTPPTPSKSKAKPTSPSPTTPTRPSPR--VRPSSFKTPSACATS 551



 Score = 34.7 bits (78), Expect = 0.20
 Identities = 44/164 (26%), Positives = 58/164 (34%), Gaps = 1/164 (0%)
 Frame = +3

Query: 432 PTRVEPAAEVVRRTEPPARVTRSSAHSSKPALTSDDDLNLFDALPISALLQHSSNPLTPI 491
           P RV  A   V R  PP   +     ++ P   S            S  L+ SS P T  
Sbjct: 201 PQRVTSAT--VSRHAPPTSPSSPPRRNTPPPPPSPSS---------STPLRPSSPPPTTS 347

Query: 492 PESQPAEQTTSPPHSPRSSFFQPSPTEAPLWNLLQNQPSRSDEPTSLLTIPYDPLS-SEP 550
           P S+P+  T S           PSP+ AP           +  PT+  T P    S ++P
Sbjct: 348 PTSRPSRPTPS----------SPSPSTAP-----------APAPTTSTTPPTPSKSKAKP 464

Query: 551 IIHEQPEPNQTEPQPRTSDHSAPRASARPAARTTDTDSSTAFTP 594
                  P +  P+ R S    P A A  +   T T  S A  P
Sbjct: 465 TSPSPTTPTRPSPRVRPSSFKTPSACATSSRVRTSTCLSGARVP 596



 Score = 31.2 bits (69), Expect = 2.3
 Identities = 26/101 (25%), Positives = 39/101 (37%), Gaps = 12/101 (11%)
 Frame = +3

Query: 668 QQAHPVPDQQEPIQPDPEPEQSVSNQSSVRSPHPLVETSDPHLGTSEPNAPMINIGSPQG 727
           + A P      P +  P P  S S+ + +R   P   TS     TS P+ P  +  SP  
Sbjct: 231 RHAPPTSPSSPPRRNTPPPPPSPSSSTPLRPSSPPPTTSP----TSRPSRPTPSSPSPST 398

Query: 728 A------------SEAHSSNHPASPAPNLSIIPYTHLQPTS 756
           A            + + S   P SP+P     P   ++P+S
Sbjct: 399 APAPAPTTSTTPPTPSKSKAKPTSPSPTTPTRPSPRVRPSS 521


>TC226228 similar to UP|Q8L9C3 (Q8L9C3) Copia-like retroelement pol
           polyprotein, partial (97%)
          Length = 1094

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
 Frame = +2

Query: 802 QVPIMMQLLHAEGS----QSIEAAKQRFARRVALHE---LEQRNKLLEAIEEAKRKKEQA 854
           Q+ I  Q++  EG+    ++++A +   A   A+ +   ++  +K ++ I E     +Q 
Sbjct: 458 QLRIHDQMIMLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEINEQTENMKQI 637

Query: 855 EEAARQ---AAAQAEQARLEAERLEAEAEALRCQALAPVVFTPAASASIP-DPQAAQNVP 910
           ++A      AAA  ++  LEAE  E E   L  Q L P    PAA   +P   Q  + VP
Sbjct: 638 QDALSAPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPVQVPAGQQPTRPVP 817

Query: 911 SSST 914
           +  T
Sbjct: 818 AKRT 829


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.313    0.130    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,248,410
Number of Sequences: 63676
Number of extensions: 646482
Number of successful extensions: 6391
Number of sequences better than 10.0: 394
Number of HSP's better than 10.0 without gapping: 5241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6066
length of query: 952
length of database: 12,639,632
effective HSP length: 106
effective length of query: 846
effective length of database: 5,889,976
effective search space: 4982919696
effective search space used: 4982919696
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)