TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0012a.1
         (263 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC205250 similar to GB|BAB01116.1|11994113|AB026658 CND41, chlor...    39  0.003
TC205918 similar to UP|Q94F39 (Q94F39) AT3g29575/MWE13_2, partia...    37  0.012
BE610832                                                               36  0.016
TC214232 weakly similar to UP|ATF5_HUMAN (Q9Y2D1) Cyclic-AMP-dep...    34  0.078
TC230714 weakly similar to GB|AAO44076.1|28466935|BT004810 At5g2...    33  0.10
BE609293                                                               33  0.13
CO981213                                                               33  0.13
BU763938 similar to GP|21537026|gb| beta-N-acetylhexosaminidase-...    33  0.17
BI426124                                                               32  0.30
TC204444 homologue to UP|CADH_MEDSA (P31656) Cinnamyl-alcohol de...    32  0.30
TC204440 similar to UP|CADH_MEDSA (P31656) Cinnamyl-alcohol dehy...    32  0.30
TC220640                                                               32  0.30
TC235093 similar to UP|Q8MZ21 (Q8MZ21) RE13473p, partial (8%)          31  0.50
TC221953                                                               31  0.50
TC220510 similar to UP|Q7XZD0 (Q7XZD0) Isoflavonoid glucosyltran...    31  0.66
TC216072 similar to UP|Q8LD77 (Q8LD77) 6-phosphogluconolactonase...    31  0.66
TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like ara...    31  0.66
TC220881 similar to UP|Q9T0K5 (Q9T0K5) Extensin-like protein, pa...    31  0.66
TC226605 similar to UP|Q93YR3 (Q93YR3) HSP associated protein li...    30  0.86
BG882626                                                               30  1.1

>TC205250 similar to GB|BAB01116.1|11994113|AB026658 CND41, chloroplast
           nucleoid DNA binding protein-like {Arabidopsis
           thaliana;} , partial (67%)
          Length = 2013

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 51/227 (22%), Positives = 94/227 (40%), Gaps = 11/227 (4%)
 Frame = +3

Query: 15  SMSLPSYTKPT-TLPRSHAF-FARVKKRPLLTVPKSGTDEEAKELTKAEPSVNNKESSNS 72
           SMSL   TKPT + P +H F  + ++K+ L               T+ +PS  +  ++ +
Sbjct: 231 SMSLLLSTKPTKSSPSTHNF*KSNLQKQKLPLHHLLLLLHSLSNSTQEKPS--STSNTPT 404

Query: 73  VVPGINEEDPPTSKTVSLALIFLGLPREREL--LKAHHKRTCHIRYIHPQRRQERASNNQ 130
             P  + + P T   ++L+     LP       +    KR C      P+  + R+    
Sbjct: 405 TKP*FSPDSPATQPELTLSTPNSSLPSPASTGRIFTRPKRNCS----DPKTSRRRSPPAP 572

Query: 131 GRRTMLPSEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSS-- 188
            R     S  +    P+ PST   S+P+P  T ++++   + T    R S++   P +  
Sbjct: 573 PRAAASTSHASAWGNPRSPSTW-SSTPAPTSTGSNANPAPIATNNPTRFSTRQRPPRTTP 749

Query: 189 -----QVIRTSKTRSLEKISGNKVATDILSVSTPPRQHPEIRHSSPG 230
                  +RTSK    E ++ +  +  +++ S      P++  S PG
Sbjct: 750 *PATHNSVRTSKCPLAETVNASTKSHTVMAHSL*ENTSPKLCRSEPG 890


>TC205918 similar to UP|Q94F39 (Q94F39) AT3g29575/MWE13_2, partial (62%)
          Length = 1479

 Score = 36.6 bits (83), Expect = 0.012
 Identities = 36/149 (24%), Positives = 55/149 (36%), Gaps = 11/149 (7%)
 Frame = +2

Query: 52  EEAKELTKAEPSVNNKESSNSV---VPGINEEDPPTSKTVSLALIFLGLPRERELLKAHH 108
           E+ + +          E SN V     G  E  PP ++TVSL     GL    +  K   
Sbjct: 617 EKQRNMKALREQQQRSEGSNPVEQGAGGYGEVAPPLARTVSLTARVCGLGLNGDSEKEKK 796

Query: 109 KRTCHIRYIHPQRRQ--------ERASNNQGRRTMLPSEGTRTSLPKLPSTQLKSSPSPA 160
           ++   I    P   Q          A + QG+ T      + TS   LP ++LKS    A
Sbjct: 797 EKRSGIALPPPSPSQGSIGSSGISEAESQQGQGTTPMDVRSPTSANLLPDSELKSPAGVA 976

Query: 161 KTKASSDHRSLTTTLGKRQSSKTLLPSSQ 189
           +     +  +      + QS+K   P S+
Sbjct: 977 ENNTGKNAAAAAAVTMRSQSNKYSPPQSR 1063


>BE610832 
          Length = 368

 Score = 36.2 bits (82), Expect = 0.016
 Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
 Frame = +2

Query: 118 HPQRRQERASNNQGRRTMLPSEGTRTSLPKLPSTQLKSSPSPAKTKASSD-----HRSLT 172
           HP+      +NN+ R  + P+    T  P  PST       P+KT+  +D     +  + 
Sbjct: 38  HPKNNNNNNNNNK-RLFLSPTNAVYTQSPYTPST-------PSKTELHNDPITVLNERIR 193

Query: 173 TTLGKRQSSKTLLPSSQ------VIRTSKTRSLEKISGNKVATD 210
             L K+++ +T++ S +      +++  + R L+K+ G++ + D
Sbjct: 194 RDLSKKEAFRTVMDSEEAGKYMKMVKVQQQRGLQKLKGDRESKD 325


>TC214232 weakly similar to UP|ATF5_HUMAN (Q9Y2D1) Cyclic-AMP-dependent
           transcription factor ATF-5 (Activating transcription
           factor 5) (Transcription factor ATFx), partial (8%)
          Length = 1283

 Score = 33.9 bits (76), Expect = 0.078
 Identities = 29/114 (25%), Positives = 44/114 (38%)
 Frame = +1

Query: 129 NQGRRTMLPSEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSS 188
           + G R   PS     S   +PST  +SSPSPA T A +         G R S  +   +S
Sbjct: 142 SSGLRGRSPSPTWTASPAPIPSTTRRSSPSPAPTPARTSPPRNAAPGGFRASCSSKKTAS 321

Query: 189 QVIRTSKTRSLEKISGNKVATDILSVSTPPRQHPEIRHSSPGERTRTLCSPCFP 242
               ++ + S    S N   T     S+P     +   +S  + T +     +P
Sbjct: 322 TAATSASSPSAPTRSENSSTTSAAPSSSPASSTSKFAPASTPKTTSSRPFASYP 483


>TC230714 weakly similar to GB|AAO44076.1|28466935|BT004810 At5g22890
           {Arabidopsis thaliana;} , partial (58%)
          Length = 1049

 Score = 33.5 bits (75), Expect = 0.10
 Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
 Frame = +2

Query: 144 SLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTL-LPS------SQVIRTSKT 196
           S+P LPS  +KS  SPA++   S   S T       SS TL +PS       + IR S++
Sbjct: 32  SIPTLPSPSIKSPWSPARSSPPSTKSSSTAP----PSSLTLRIPSPPEHRIHRRIRRSRS 199

Query: 197 RSLE---KISGNKVATDILSVSTPPRQHPEIRHSSPGERTRTLCS 238
           R+L+   K S + +    LS +T  +       S+P + +R+ C+
Sbjct: 200 RNLQLPIKRSKHSIPNSSLSKATTAKSW----SSTPSKSSRSTCT 322


>BE609293 
          Length = 436

 Score = 33.1 bits (74), Expect = 0.13
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
 Frame = +1

Query: 137 PSEGTRTSLPKLPSTQLKSSPSPA----KTKASSDHRSLTTTLG-KRQSSKTLLPSS 188
           PS  T+   P  PST L +SPSPA     T A++   S  T L   R+S  T +P S
Sbjct: 7   PSTPTQPPSPPSPSTPLPTSPSPATSSPPTPAATSPSSTPTALSTSRRSPSTAIPPS 177


>CO981213 
          Length = 710

 Score = 33.1 bits (74), Expect = 0.13
 Identities = 33/119 (27%), Positives = 45/119 (37%)
 Frame = +1

Query: 138 SEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSSQVIRTSKTR 197
           S   R S   L  +   S PSPA   ASS   S T       +S TLLP      +S T 
Sbjct: 205 SSSRRVSSCTLSHSPTSSPPSPASPTASSSPTSPTAL----AASTTLLPPPSAPTSSST- 369

Query: 198 SLEKISGNKVATDILSVSTPPRQHPEIRHSSPGERTRTLCSPCFPTTTSRQEKVEGKDP 256
                     AT   S STPP+       S+    + T  +P   T++ + +     +P
Sbjct: 370 ---------TATAASSPSTPPQSPASTSSSTSKSTSLTSSTPSA*TSSPKPKPSSSLEP 519


>BU763938 similar to GP|21537026|gb| beta-N-acetylhexosaminidase-like protein
           {Arabidopsis thaliana}, partial (7%)
          Length = 443

 Score = 32.7 bits (73), Expect = 0.17
 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
 Frame = +2

Query: 129 NQG-----RRTMLPSEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKT 183
           NQG       T  PS    +  P  P+T    SPSP+    +S + S TT L  +QS+  
Sbjct: 14  NQGTLHGPHHTKPPSSPPHSPSPPPPTTTTSISPSPSAATRTSSNPSTTTHLSHKQSTSP 193

Query: 184 LLPSSQV-IRTSKTRSLEKISGNKVATDILSVSTPPRQHPEIR 225
              S    +  S+  +L + S     +  LS S+ P   P ++
Sbjct: 194 TNTSHHCRLSRSQWWTLLQNSSTPWTSPTLSPSSLPHVLPSLQ 322


>BI426124 
          Length = 348

 Score = 32.0 bits (71), Expect = 0.30
 Identities = 17/37 (45%), Positives = 21/37 (55%)
 Frame = +2

Query: 133 RTMLPSEGTRTSLPKLPSTQLKSSPSPAKTKASSDHR 169
           R+  PS  +  SL  +PST   SSPSPA T A +  R
Sbjct: 146 RSRSPSPTSTASLAPIPSTTRPSSPSPAPTPARTSPR 256


>TC204444 homologue to UP|CADH_MEDSA (P31656) Cinnamyl-alcohol dehydrogenase 
           (CAD) , partial (22%)
          Length = 790

 Score = 32.0 bits (71), Expect = 0.30
 Identities = 16/46 (34%), Positives = 24/46 (51%)
 Frame = -1

Query: 218 PRQHPEIRHSSPGERTRTLCSPCFPTTTSRQEKVEGKDPTPFLNPN 263
           P+Q    RHSSP  +    C+PC P  +S  +    + PT  L+P+
Sbjct: 649 PQQTCISRHSSPTFQRLC*CNPCLPFQSSNSDPSLSRTPTSPLSPS 512


>TC204440 similar to UP|CADH_MEDSA (P31656) Cinnamyl-alcohol dehydrogenase
            (CAD) , partial (97%)
          Length = 1481

 Score = 32.0 bits (71), Expect = 0.30
 Identities = 16/46 (34%), Positives = 24/46 (51%)
 Frame = -3

Query: 218  PRQHPEIRHSSPGERTRTLCSPCFPTTTSRQEKVEGKDPTPFLNPN 263
            P+Q    RHSSP  +    C+PC P  +S  +    + PT  L+P+
Sbjct: 1104 PQQTCISRHSSPTFQRLC*CNPCLPFQSSNSDPSLSRTPTSPLSPS 967


>TC220640 
          Length = 1123

 Score = 32.0 bits (71), Expect = 0.30
 Identities = 37/116 (31%), Positives = 54/116 (45%), Gaps = 9/116 (7%)
 Frame = +1

Query: 141 TRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSSQVIRTSKTRSLE 200
           T +S P+LPST  K+  SP     +S   S T T   R ++ +  PSS+   +S  R   
Sbjct: 28  TASSTPRLPSTSSKTPTSPPP*STTSSKPSPT*TKVPRAAAPS-TPSSRASASSVARM-- 198

Query: 201 KISGNKVATDIL---SVSTPPRQHPEIRHS--SPGER----TRTLCSPCFPTTTSR 247
                + A  IL   + S PP + P  + S  SPG++    TR   S  +P + SR
Sbjct: 199 ----RRFA**ILWRVTTSAPPPRAPSTQSSNASPGKKNPSTTRGAWSITWPGSGSR 354


>TC235093 similar to UP|Q8MZ21 (Q8MZ21) RE13473p, partial (8%)
          Length = 967

 Score = 31.2 bits (69), Expect = 0.50
 Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 12/125 (9%)
 Frame = +3

Query: 146 PKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSSQVI------RTSKTRSL 199
           P+ P T   +SPSP +T  ++      T   +RQ     +PS++        RT +T + 
Sbjct: 117 PRSPWTPRSTSPSPTQTTKTTKK----TARARRQCHPLTIPSARSPQ*KIPPRTQRTCNR 284

Query: 200 -----EKISGNKVATDILSVSTPPRQHP-EIRHSSPGERTRTLCSPCFPTTTSRQEKVEG 253
                E  +         S   P R  P +   SSP  RTR  C   +PT  S +     
Sbjct: 285 YSTT*EPATAYSATQSRCSTHCPKRVSPTKPWSSSPRSRTRATCPTWWPTPPSSR----- 449

Query: 254 KDPTP 258
             PTP
Sbjct: 450 --PTP 458


>TC221953 
          Length = 698

 Score = 31.2 bits (69), Expect = 0.50
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = +3

Query: 146 PKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSSQVIRTSKTRSL 199
           P   S +  +SP+ ++T +SS  RS T +   R +  + LPS     +S TRS+
Sbjct: 396 PLRQSKKPPASPASSRTASSSGRRSATPSSTPRPTPTSSLPSRPAAPSSSTRSV 557


>TC220510 similar to UP|Q7XZD0 (Q7XZD0) Isoflavonoid glucosyltransferase,
           partial (62%)
          Length = 925

 Score = 30.8 bits (68), Expect = 0.66
 Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
 Frame = +1

Query: 144 SLPKLPSTQLKSSPSPAKTKASSDHRSLT--TTLGK--RQSSKTLLPSSQVIRTSKTRSL 199
           SLP LPS ++  +PSP     S+ HR      +L    RQSSK +  SS  +R S  +S 
Sbjct: 451 SLPILPSFRVSLTPSP-----STQHRQRN*PNSLKPCWRQSSKAMASSSTALRNSMEKST 615

Query: 200 EKISGNKVATDILSVSTPPRQHPEIRHSSPGERTRT-LCSPCFPTTTSRQE 249
              +    AT +  ++ P      ++    G+R    +C+  +   T R++
Sbjct: 616 PATTRKPRATRLGILALPL**AEPLKRKQRGDRRAW*VCTSVWLGLTQREK 768


>TC216072 similar to UP|Q8LD77 (Q8LD77) 6-phosphogluconolactonase-like
           protein, partial (36%)
          Length = 684

 Score = 30.8 bits (68), Expect = 0.66
 Identities = 23/61 (37%), Positives = 26/61 (41%), Gaps = 11/61 (18%)
 Frame = +2

Query: 137 PSEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRSL-----------TTTLGKRQSSKTLL 185
           PS  T  S    P T    +PS +K  ASS  R L           TTTL  R S K +L
Sbjct: 128 PSSQTAPSFIHPPHTSSSLAPSDSKVFASSISRDLFPR*KHRWRRPTTTLPSRSSKKRIL 307

Query: 186 P 186
           P
Sbjct: 308 P 310


>TC225829 weakly similar to UP|Q9C5Q6 (Q9C5Q6) Fasciclin-like
           arabinogalactan-protein 2, partial (57%)
          Length = 1652

 Score = 30.8 bits (68), Expect = 0.66
 Identities = 28/121 (23%), Positives = 43/121 (35%)
 Frame = +2

Query: 137 PSEGTRTSLPKLPSTQLKSSPSPAKTKASSDHRSLTTTLGKRQSSKTLLPSSQVIRTSKT 196
           P   T +  P  P     + PSP+           +T+      SKT  PS+    TS  
Sbjct: 119 PPSTTTSPSPTWPKRSTAARPSPSWPSTMPPCPPSSTSTSPSPPSKTSSPSTSSSTTSAP 298

Query: 197 RSLEKISGNKVATDILSVSTPPRQHPEIRHSSPGERTRTLCSPCFPTTTSRQEKVEGKDP 256
           +S  + +    ++   S    P   P    +SP  R     SP  P TT+        +P
Sbjct: 299 KSSTRSTTAPPSSPPCSRPPAPPPAPPATSTSPTSRPARSASP--PKTTTAPSTPSTSNP 472

Query: 257 T 257
           +
Sbjct: 473 S 475


>TC220881 similar to UP|Q9T0K5 (Q9T0K5) Extensin-like protein, partial (3%)
          Length = 728

 Score = 30.8 bits (68), Expect = 0.66
 Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 1/109 (0%)
 Frame = +1

Query: 149 PSTQLKSSPSPAKT-KASSDHRSLTTTLGKRQSSKTLLPSSQVIRTSKTRSLEKISGNKV 207
           PST   ++P+PA T   +S   +L ++     +S T  PS        T S    +    
Sbjct: 181 PSTTSATAPTPAATAPTASSSSTLASSALSASNSTTTRPS-----LPTTASCASAAPPSH 345

Query: 208 ATDILSVSTPPRQHPEIRHSSPGERTRTLCSPCFPTTTSRQEKVEGKDP 256
              + S    P  HP   H S       L SP   + T+R E      P
Sbjct: 346 TVPVRSPPPTPPLHPRQHHRSSALLVSILTSPTSNSPTARPEPSTSSPP 492


>TC226605 similar to UP|Q93YR3 (Q93YR3) HSP associated protein like, partial
           (37%)
          Length = 670

 Score = 30.4 bits (67), Expect = 0.86
 Identities = 27/113 (23%), Positives = 48/113 (41%), Gaps = 5/113 (4%)
 Frame = +3

Query: 111 TCHIRYIHPQRRQERASNNQGRRTMLPSE-----GTRTSLPKLPSTQLKSSPSPAKTKAS 165
           +C+I+         R    Q +  M P+       + ++ P LPS+ +  SPS A     
Sbjct: 36  SCNIKTTEENITAPRCHTEQTQTWMHPNSIN*SISSNSASPTLPSSPILHSPSSATIPKV 215

Query: 166 SDHRSLTTTLGKRQSSKTLLPSSQVIRTSKTRSLEKISGNKVATDILSVSTPP 218
           S   SL   +  R++ +  + + +++R SK R  +K    K    +LS    P
Sbjct: 216 SGRNSLNLLIPNRRAWRA-MRT*KMLRRSKRREKKKKKMMK*LNPMLSSRVKP 371


>BG882626 
          Length = 417

 Score = 30.0 bits (66), Expect = 1.1
 Identities = 29/117 (24%), Positives = 46/117 (38%), Gaps = 9/117 (7%)
 Frame = +1

Query: 151 TQLKSSPSPAKTKASSDHRS------LTTTLGKRQSSKTLL---PSSQVIRTSKTRSLEK 201
           T L+SS S   T  +   R+       +TTLG R+  +      P  +V R ++TR+   
Sbjct: 19  TLLQSSESSEGTSLTQSPRTDLTAQRASTTLGLRKKEEEAWRCGPQCRVSRWTRTRARAP 198

Query: 202 ISGNKVATDILSVSTPPRQHPEIRHSSPGERTRTLCSPCFPTTTSRQEKVEGKDPTP 258
                  +     S PP + P +R ++P   +        PT+T       G  P P
Sbjct: 199 ACSGVSPS---RRSPPPTRTPALRRTAPAATSCPGARTAGPTSTPTASSSSGPGPAP 360


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.310    0.125    0.354 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,245,638
Number of Sequences: 63676
Number of extensions: 173639
Number of successful extensions: 1657
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 1631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1653
length of query: 263
length of database: 12,639,632
effective HSP length: 95
effective length of query: 168
effective length of database: 6,590,412
effective search space: 1107189216
effective search space used: 1107189216
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)