BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0010.22
(235 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BM187982 similar to GP|20197268|gb| expressed protein {Arabidops... 223 6e-59
TC220739 weakly similar to UP|PRP4_HUMAN (O43172) U4/U6 small nu... 91 6e-19
TC208265 similar to UP|Q6S7B0 (Q6S7B0) TAF5, partial (36%) 87 5e-18
TC207354 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat prot... 85 3e-17
TC220018 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana geno... 80 1e-15
TC208379 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana geno... 77 9e-15
TC207353 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat prot... 71 4e-13
TC216091 similar to PIR|T00593|T02480 sec13-related protein At2g... 70 6e-13
TC211342 similar to UP|Q9LVF2 (Q9LVF2) Arabidopsis thaliana geno... 70 6e-13
TC209377 similar to UP|Q9FLX9 (Q9FLX9) Notchless protein homolog... 69 2e-12
BI784574 similar to GP|16323188|gb AT5g67320/K8K14_4 {Arabidopsi... 67 7e-12
TC207267 similar to UP|Q8GTM1 (Q8GTM1) WD40, partial (53%) 67 9e-12
TC229097 similar to PIR|T46032|T46032 WD-40 repeat regulatory pr... 67 9e-12
TC216518 weakly similar to UP|Q9LW87 (Q9LW87) Coatomer protein c... 67 9e-12
TC206061 weakly similar to UP|Q9FNN2 (Q9FNN2) WD-repeat protein-... 66 1e-11
TC228588 similar to UP|Q6NLV4 (Q6NLV4) At5g13480, partial (29%) 64 5e-11
TC206060 weakly similar to UP|Q9FNN2 (Q9FNN2) WD-repeat protein-... 64 6e-11
TC222379 homologue to UP|Q9HGV7 (Q9HGV7) Gbeta like protein, par... 62 2e-10
TC228105 similar to GB|AAP37692.1|30725340|BT008333 At4g29830 {A... 62 2e-10
TC220207 similar to UP|Q6H975 (Q6H975) STY-L protein, partial (43%) 61 5e-10
>BM187982 similar to GP|20197268|gb| expressed protein {Arabidopsis
thaliana}, partial (22%)
Length = 428
Score = 223 bits (568), Expect = 6e-59
Identities = 102/112 (91%), Positives = 107/112 (95%)
Frame = +1
Query: 4 LELKEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAV 63
+ELKE+QRLEGH D+VWSL WNP TGHAG PLVFASCSGDKTVRIWEQ+LSSGLWAC AV
Sbjct: 91 MELKEIQRLEGHTDKVWSLAWNPTTGHAGIPLVFASCSGDKTVRIWEQNLSSGLWACTAV 270
Query: 64 LDETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENE 115
LDETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECV+TLEGHENE
Sbjct: 271 LDETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVSTLEGHENE 426
Score = 67.0 bits (162), Expect = 7e-12
Identities = 43/104 (41%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Frame = +1
Query: 66 ETHTRTVRSCAWSPSGK------LLATASFDATTAIWEN--VGGDFECVATL-EGHENEV 116
E HT V S AW+P+ + A+ S D T IWE G + C A L E H V
Sbjct: 118 EGHTDKVWSLAWNPTTGHAGIPLVFASCSGDKTVRIWEQNLSSGLWACTAVLDETHTRTV 297
Query: 117 KSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQD 160
+S +W+ SG LLAT S D + IWE +FECVS L+GH +
Sbjct: 298 RSCAWSPSGKLLATASFDATTAIWE-NVGGDFECVSTLEGHENE 426
Score = 62.0 bits (149), Expect = 2e-10
Identities = 35/103 (33%), Positives = 59/103 (56%), Gaps = 8/103 (7%)
Frame = +1
Query: 106 VATLEGHENEVKSVSWNASG------TLLATCSRDKSVWIWEMQPVNE-FECVSVL-QGH 157
+ LEGH ++V S++WN + + A+CS DK+V IWE + + C +VL + H
Sbjct: 106 IQRLEGHTDKVWSLAWNPTTGHAGIPLVFASCSGDKTVRIWEQNLSSGLWACTAVLDETH 285
Query: 158 TQDVKMVKWHPTEDILISCSYDNSIKVWADEGDSDDWQCVQTL 200
T+ V+ W P+ +L + S+D + +W + G D++CV TL
Sbjct: 286 TRTVRSCAWSPSGKLLATASFDATTAIWENVG--GDFECVSTL 408
Score = 49.3 bits (116), Expect = 2e-06
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Frame = +1
Query: 147 EFECVSVLQGHTQDVKMVKWHPTED------ILISCSYDNSIKVWADEGDSDDWQCVQTL 200
E + + L+GHT V + W+PT + SCS D ++++W S W C L
Sbjct: 94 ELKEIQRLEGHTDKVWSLAWNPTTGHAGIPLVFASCSGDKTVRIWEQNLSSGLWACTAVL 273
Query: 201 GQPNNGHTSTVWALSFNASGDKMVTCSSNLLMAV 234
+ HT TV + +++ SG + T S + A+
Sbjct: 274 DET---HTRTVRSCAWSPSGKLLATASFDATTAI 366
>TC220739 weakly similar to UP|PRP4_HUMAN (O43172) U4/U6 small nuclear
ribonucleoprotein Prp4 (U4/U6 snRNP 60 kDa protein) (WD
splicing factor Prp4) (hPrp4), partial (34%)
Length = 1206
Score = 90.5 bits (223), Expect = 6e-19
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 1/220 (0%)
Frame = +1
Query: 9 VQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETH 68
++ EGH DR+ + ++P+ + GT S DKT R+W+ + L +L E H
Sbjct: 298 LKTFEGHLDRLARIAFHPSGKYLGT------ASFDKTWRLWDIETGDEL-----LLQEGH 444
Query: 69 TRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTLL 128
+R+V A+ G L A+ D+ +W+ G + LEGH V +S++ +G L
Sbjct: 445 SRSVYGLAFHNDGSLAASCGLDSLARVWDLRTG--RSILALEGHVKPVLGISFSPNGYHL 618
Query: 129 ATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTED-ILISCSYDNSIKVWAD 187
AT D + IW+++ F + H+ + VK+ P E L++ SYD + KVW+
Sbjct: 619 ATGGEDNTCRIWDLRKKKSF---YTIPAHSNLISQVKFEPHEGYFLVTASYDMTAKVWSG 789
Query: 188 EGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMVTCS 227
D++ V+TL +GH + V ++ G +VT S
Sbjct: 790 R----DFKPVKTL----SGHEAKVTSVDVLGDGGSIVTVS 885
Score = 67.4 bits (163), Expect = 5e-12
Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Frame = +1
Query: 7 KEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDE 66
+ + LEGH V + ++P H T D T RIW+ + A
Sbjct: 544 RSILALEGHVKPVLGISFSPNGYHLATG------GEDNTCRIWDLRKKKSFYTIPA---- 693
Query: 67 THTRTVRSCAWSP-SGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASG 125
H+ + + P G L TAS+D T +W G DF+ V TL GHE +V SV G
Sbjct: 694 -HSNLISQVKFEPHEGYFLVTASYDMTAKVWS--GRDFKPVKTLSGHEAKVTSVDVLGDG 864
Query: 126 TLLATCSRDKSVWIWEMQPVNE 147
+ T S D+++ +W P +E
Sbjct: 865 GSIVTVSHDRTIKLWSSNPTDE 930
Score = 58.9 bits (141), Expect = 2e-09
Identities = 39/165 (23%), Positives = 75/165 (44%)
Frame = +1
Query: 70 RTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTLLA 129
R + C++S GK LAT S + +W + + +GH V+++ LA
Sbjct: 76 RPLSGCSFSRDGKWLATCSLTGASKLWSM--PKIKKHSIFKGHTERATDVAYSPVHDHLA 249
Query: 130 TCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKVWADEG 189
T S D++ W N+ + +GH + + +HP+ L + S+D + ++W +
Sbjct: 250 TASADRTAKYW-----NQGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLW--DI 408
Query: 190 DSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMVTCSSNLLMAV 234
++ D +Q GH+ +V+ L+F+ G +C + L V
Sbjct: 409 ETGDELLLQ------EGHSRSVYGLAFHNDGSLAASCGLDSLARV 525
Score = 46.2 bits (108), Expect = 1e-05
Identities = 31/117 (26%), Positives = 54/117 (45%)
Frame = +1
Query: 111 GHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTE 170
G + + S++ G LATCS + +W M + + S+ +GHT+ V + P
Sbjct: 67 GDDRPLSGCSFSRDGKWLATCSLTGASKLWSMPKIKKH---SIFKGHTERATDVAYSPVH 237
Query: 171 DILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMVTCS 227
D L + S D + K W ++G +L + GH + ++F+ SG + T S
Sbjct: 238 DHLATASADRTAKYW-NQG---------SLLKTFEGHLDRLARIAFHPSGKYLGTAS 378
>TC208265 similar to UP|Q6S7B0 (Q6S7B0) TAF5, partial (36%)
Length = 1048
Score = 87.4 bits (215), Expect = 5e-18
Identities = 58/191 (30%), Positives = 92/191 (47%)
Frame = +2
Query: 39 SCSGDKTVRIWEQDLSSGLWACKAVLDETHTRTVRSCAWSPSGKLLATASFDATTAIWEN 98
S S D T+R+W L++ L K H V +SP G A++S D T IW
Sbjct: 38 SSSADSTIRLWSTKLNANLVCYKG-----HNYPVWDVQFSPVGHYFASSSHDRTARIWSM 202
Query: 99 VGGDFECVATLEGHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHT 158
+ + + GH ++V V W+A+ +AT S DK+V +W++Q ECV V GH
Sbjct: 203 --DRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQ---SGECVRVFVGHR 367
Query: 159 QDVKMVKWHPTEDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNA 218
+ + P + S D +I +W D +C+ P GHTS VW+L+F++
Sbjct: 368 GMILSLAMSPDGRYMASGDEDGTIMMW----DLSSGRCL----TPLIGHTSCVWSLAFSS 523
Query: 219 SGDKMVTCSSN 229
G + + S++
Sbjct: 524 EGSVIASGSAD 556
Score = 78.6 bits (192), Expect = 2e-15
Identities = 50/173 (28%), Positives = 80/173 (45%)
Frame = +2
Query: 13 EGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTRTV 72
+GHN VW + ++P GH FAS S D+T RIW D L H V
Sbjct: 104 KGHNYPVWDVQFSPV-GH-----YFASSSHDRTARIWSMDRIQPLRIMAG-----HLSDV 250
Query: 73 RSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTLLATCS 132
W + +AT S D T +W+ G ECV GH + S++ + G +A+
Sbjct: 251 DCVQWHANCNYIATGSSDKTVRLWDVQSG--ECVRVFVGHRGMILSLAMSPDGRYMASGD 424
Query: 133 RDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKVW 185
D ++ +W++ + C++ L GHT V + + ++ S S D ++K+W
Sbjct: 425 EDGTIMMWDL---SSGRCLTPLIGHTSCVWSLAFSSEGSVIASGSADCTVKLW 574
>TC207354 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat protein 5,
partial (57%)
Length = 1124
Score = 84.7 bits (208), Expect = 3e-17
Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
Frame = +1
Query: 36 VFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTRTVRSCAWSPSGKLLATASFDATTAI 95
+ AS S DKT+ IW S+ L C ++ H+ + AWS + +AS D T I
Sbjct: 178 LLASASLDKTLIIWS---SATLTLCHRLVG--HSEGISDLAWSSDSHYICSASDDRTLRI 342
Query: 96 WE-NVGGDFECVATLEGHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVL 154
W+ VGG C+ L GH++ V V++N + + + S D+++ +W+ V +CV +
Sbjct: 343 WDATVGGG--CIKILRGHDDAVFCVNFNPQSSYIVSGSFDETIKVWD---VKTGKCVHTI 507
Query: 155 QGHTQDVKMVKWHPTEDILISCSYDNSIKVWADE 188
+GHT V V ++ +++IS S+D S K+W E
Sbjct: 508 KGHTMPVTSVHYNRDGNLIISASHDGSCKIWDTE 609
Score = 80.5 bits (197), Expect = 6e-16
Identities = 47/175 (26%), Positives = 88/175 (49%)
Frame = +1
Query: 11 RLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTR 70
RL GH++ + L W+ + + S S D+T+RIW+ + G C +L H
Sbjct: 247 RLVGHSEGISDLAWSSDSHY------ICSASDDRTLRIWDATVGGG---CIKIL-RGHDD 396
Query: 71 TVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTLLAT 130
V ++P + + SFD T +W+ G +CV T++GH V SV +N G L+ +
Sbjct: 397 AVFCVNFNPQSSYIVSGSFDETIKVWDVKTG--KCVHTIKGHTMPVTSVHYNRDGNLIIS 570
Query: 131 CSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKVW 185
S D S IW+ + N + ++++ V K+ P ++++ + ++++K+W
Sbjct: 571 ASHDGSCKIWDTETGNLLK--TLIEDKAPAVSFAKFSPNGKLILAATLNDTLKLW 729
Score = 79.7 bits (195), Expect = 1e-15
Identities = 46/160 (28%), Positives = 78/160 (48%)
Frame = +1
Query: 68 HTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTL 127
H V +S G LLA+AS D T IW + L GH + ++W++
Sbjct: 133 HENAVSCVKFSNDGTLLASASLDKTLIIWSS--ATLTLCHRLVGHSEGISDLAWSSDSHY 306
Query: 128 LATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKVWAD 187
+ + S D+++ IW+ C+ +L+GH V V ++P ++S S+D +IKVW
Sbjct: 307 ICSASDDRTLRIWDATVGG--GCIKILRGHDDAVFCVNFNPQSSYIVSGSFDETIKVW-- 474
Query: 188 EGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMVTCS 227
D +CV T+ GHT V ++ +N G+ +++ S
Sbjct: 475 --DVKTGKCVHTI----KGHTMPVTSVHYNRDGNLIISAS 576
Score = 48.9 bits (115), Expect = 2e-06
Identities = 30/132 (22%), Positives = 62/132 (46%)
Frame = +1
Query: 9 VQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETH 68
++ L GH+D V+ +++NP + + S S D+T+++W+ + K H
Sbjct: 370 IKILRGHDDAVFCVNFNPQSSY------IVSGSFDETIKVWDVKTGKCVHTIKG-----H 516
Query: 69 TRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTLL 128
T V S ++ G L+ +AS D + IW+ G+ +E V ++ +G L+
Sbjct: 517 TMPVTSVHYNRDGNLIISASHDGSCKIWDTETGNL-LKTLIEDKAPAVSFAKFSPNGKLI 693
Query: 129 ATCSRDKSVWIW 140
+ + ++ +W
Sbjct: 694 LAATLNDTLKLW 729
Score = 48.1 bits (113), Expect = 3e-06
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Frame = +2
Query: 91 ATTAIWENVGGDFECVATLEGHENEVKSVSWNAS---GTLLATCSRDKSVWIWEMQPVNE 147
+TT + G +C+ GH N V ++ S G + S D V+IW++Q
Sbjct: 707 STTLLSYGTMGVGKCLKIYSGHVNRVYCITSTFSVTNGKYIVGGSEDHCVYIWDLQQ--- 877
Query: 148 FECVSVLQGHTQDVKMVKWHPTEDILISCSY--DNSIKVWADE 188
+ V L+GHT V V HPTE+ + S D +++VW +
Sbjct: 878 -KLVQKLEGHTDTVISVTCHPTENKIASAGLAGDRTVRVWVQD 1003
Score = 40.8 bits (94), Expect = 5e-04
Identities = 21/49 (42%), Positives = 29/49 (58%)
Frame = +2
Query: 4 LELKEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQD 52
L+ K VQ+LEGH D V S+ +P + A +GD+TVR+W QD
Sbjct: 869 LQQKLVQKLEGHTDTVISVTCHPTE----NKIASAGLAGDRTVRVWVQD 1003
Score = 33.9 bits (76), Expect = 0.066
Identities = 26/96 (27%), Positives = 44/96 (45%)
Frame = +1
Query: 7 KEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDE 66
K V ++GH V S+ +N G ++ S S D + +IW+ + + L L E
Sbjct: 490 KCVHTIKGHTMPVTSVHYN----RDGNLII--SASHDGSCKIWDTETGNLL----KTLIE 639
Query: 67 THTRTVRSCAWSPSGKLLATASFDATTAIWENVGGD 102
V +SP+GKL+ A+ + T +W G+
Sbjct: 640 DKAPAVSFAKFSPNGKLILAATLNDTLKLWNYGSGE 747
>TC220018 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana genomic DNA,
chromosome 5, TAC clone:K8K14 (AT5g67320/K8K14_4),
partial (42%)
Length = 1050
Score = 79.7 bits (195), Expect = 1e-15
Identities = 65/239 (27%), Positives = 118/239 (49%), Gaps = 9/239 (3%)
Frame = +1
Query: 5 ELKEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVL 64
ELK L H ++SL WN G L+ SC D+T +W D+ + W +
Sbjct: 4 ELKST--LSKHKGPIFSLKWNKK----GDYLLTGSC--DQTAIVW--DVKAEEWKQQF-- 147
Query: 65 DETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNAS 124
E H+ W + AT+S D + + G+ + T GH+ EV V W+ +
Sbjct: 148 -EFHSGPTLDVDWR-NNVSFATSSTDNMIHVCKI--GETHPIKTFTGHQGEVNCVKWDPT 315
Query: 125 GTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPT---------EDILIS 175
G+LLA+CS D + IW M+ + + L+ H++++ ++W PT + +L S
Sbjct: 316 GSLLASCSDDITAKIWSMK---QDTYLHDLREHSKEIYTIRWSPTGPGTNNPNHKLVLAS 486
Query: 176 CSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMVTCSSNLLMAV 234
S+D+++K+W D + + + +L +GH V++++F+ +GD +V+ S + M +
Sbjct: 487 ASFDSTVKLW----DVELGKLIYSL----DGHRHPVYSVAFSPNGDYLVSGSLDRSMHI 639
Score = 72.4 bits (176), Expect = 2e-13
Identities = 51/189 (26%), Positives = 93/189 (48%), Gaps = 9/189 (4%)
Frame = +1
Query: 5 ELKEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVL 64
E ++ GH V + W+P T + ASCS D T +IW + L +
Sbjct: 247 ETHPIKTFTGHQGEVNCVKWDP------TGSLLASCSDDITAKIWSMKQDTYLHDLRE-- 402
Query: 65 DETHTRTVRSCAWSPSGK---------LLATASFDATTAIWENVGGDFECVATLEGHENE 115
H++ + + WSP+G +LA+ASFD+T +W+ G + + +L+GH +
Sbjct: 403 ---HSKEIYTIRWSPTGPGTNNPNHKLVLASASFDSTVKLWDVELG--KLIYSLDGHRHP 567
Query: 116 VKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILIS 175
V SV+++ +G L + S D+S+ IW ++ + + V G+ + V W+ D + +
Sbjct: 568 VYSVAFSPNGDYLVSGSLDRSMHIWSLR---DGKIVKTYTGN-GGIFEVCWNKEGDKIAA 735
Query: 176 CSYDNSIKV 184
C +N++ V
Sbjct: 736 CFANNTVCV 762
Score = 70.5 bits (171), Expect = 6e-13
Identities = 64/243 (26%), Positives = 99/243 (40%), Gaps = 17/243 (6%)
Frame = +1
Query: 10 QRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETHT 69
Q+ E H+ +DW + FA+ S D + + CK + ETH
Sbjct: 139 QQFEFHSGPTLDVDWR-------NNVSFATSSTDNMIHV-----------CK--IGETHP 258
Query: 70 --------RTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSW 121
V W P+G LLA+ S D T IW + + L H E+ ++ W
Sbjct: 259 IKTFTGHQGEVNCVKWDPTGSLLASCSDDITAKIWSMKQDTY--LHDLREHSKEIYTIRW 432
Query: 122 NASGT---------LLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDI 172
+ +G +LA+ S D +V +W+ V + + L GH V V + P D
Sbjct: 433 SPTGPGTNNPNHKLVLASASFDSTVKLWD---VELGKLIYSLDGHRHPVYSVAFSPNGDY 603
Query: 173 LISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMVTCSSNLLM 232
L+S S D S+ +W+ D + V+T N G W N GDK+ C +N +
Sbjct: 604 LVSGSLDRSMHIWS----LRDGKIVKTY-TGNGGIFEVCW----NKEGDKIAACFANNTV 756
Query: 233 AVM 235
V+
Sbjct: 757 CVL 765
Score = 60.8 bits (146), Expect = 5e-10
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Frame = +1
Query: 12 LEGHNDRVWSLDWNPA---TGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETH 68
L H+ ++++ W+P T + LV AS S D TV++W+ +L +++ + H
Sbjct: 394 LREHSKEIYTIRWSPTGPGTNNPNHKLVLASASFDSTVKLWDVELGKLIYSL-----DGH 558
Query: 69 TRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTLL 128
V S A+SP+G L + S D + IW G + V T G+ + V WN G +
Sbjct: 559 RHPVYSVAFSPNGDYLVSGSLDRSMHIWSLRDG--KIVKTYTGNGG-IFEVCWNKEGDKI 729
Query: 129 ATCSRDKSVWIWEMQ 143
A C + +V + + +
Sbjct: 730 AACFANNTVCVLDFR 774
>TC208379 similar to UP|Q9FN19 (Q9FN19) Arabidopsis thaliana genomic DNA,
chromosome 5, TAC clone:K8K14 (AT5g67320/K8K14_4),
partial (42%)
Length = 1062
Score = 76.6 bits (187), Expect = 9e-15
Identities = 61/239 (25%), Positives = 117/239 (48%), Gaps = 9/239 (3%)
Frame = +2
Query: 5 ELKEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVL 64
ELK L H ++SL WN G ++ SC D+T +W D+ + W +
Sbjct: 8 ELKST--LSKHKGPIFSLKWNKK----GDYILTGSC--DQTAIVW--DVKAEEWKQQF-- 151
Query: 65 DETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNAS 124
E H+ W + AT+S D + + G+ + T GH++EV + W+ +
Sbjct: 152 -EFHSGWTLDVDWR-NNVSFATSSTDTKIHVCKI--GEKLPIRTFVGHQSEVNCIKWDPT 319
Query: 125 GTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTED---------ILIS 175
G+LLA+CS D + IW M+ + + + + H++++ ++W PT +L S
Sbjct: 320 GSLLASCSDDMTAKIWSMK---QDKYLHEFREHSKEIYTIRWSPTGPGTNNPNKNLVLAS 490
Query: 176 CSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMVTCSSNLLMAV 234
S+D+++K+W D + + + +L NGH V++++F+ +G+ + + S + M +
Sbjct: 491 ASFDSTVKLW----DVELGKLLYSL----NGHRDRVYSVAFSPNGEYIASGSPDRSMLI 643
Score = 72.4 bits (176), Expect = 2e-13
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 9/185 (4%)
Frame = +2
Query: 9 VQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETH 68
++ GH V + W+P T + ASCS D T +IW L + H
Sbjct: 263 IRTFVGHQSEVNCIKWDP------TGSLLASCSDDMTAKIWSMKQDKYLHEFRE-----H 409
Query: 69 TRTVRSCAWSPSGK---------LLATASFDATTAIWENVGGDFECVATLEGHENEVKSV 119
++ + + WSP+G +LA+ASFD+T +W+ G + + +L GH + V SV
Sbjct: 410 SKEIYTIRWSPTGPGTNNPNKNLVLASASFDSTVKLWDVELG--KLLYSLNGHRDRVYSV 583
Query: 120 SWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYD 179
+++ +G +A+ S D+S+ IW ++ E + V G + V W+ D + +C +
Sbjct: 584 AFSPNGEYIASGSPDRSMLIWSLK---EGKIVKTYTG-DGGIFEVCWNKEGDKIAACFAN 751
Query: 180 NSIKV 184
N++ V
Sbjct: 752 NTVCV 766
Score = 61.6 bits (148), Expect = 3e-10
Identities = 39/140 (27%), Positives = 68/140 (47%), Gaps = 3/140 (2%)
Frame = +2
Query: 7 KEVQRLEGHNDRVWSLDWNPA---TGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAV 63
K + H+ ++++ W+P T + LV AS S D TV++W+ +L L++
Sbjct: 383 KYLHEFREHSKEIYTIRWSPTGPGTNNPNKNLVLASASFDSTVKLWDVELGKLLYSLNG- 559
Query: 64 LDETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNA 123
H V S A+SP+G+ +A+ S D + IW G + V T G + + V WN
Sbjct: 560 ----HRDRVYSVAFSPNGEYIASGSPDRSMLIWSLKEG--KIVKTYTG-DGGIFEVCWNK 718
Query: 124 SGTLLATCSRDKSVWIWEMQ 143
G +A C + +V + + +
Sbjct: 719 EGDKIAACFANNTVCVLDFR 778
Score = 59.3 bits (142), Expect = 1e-09
Identities = 44/177 (24%), Positives = 77/177 (42%), Gaps = 9/177 (5%)
Frame = +2
Query: 68 HTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGT- 126
H V W P+G LLA+ S D T IW + + H E+ ++ W+ +G
Sbjct: 281 HQSEVNCIKWDPTGSLLASCSDDMTAKIWSMKQDKY--LHEFREHSKEIYTIRWSPTGPG 454
Query: 127 --------LLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSY 178
+LA+ S D +V +W+ V + + L GH V V + P + + S S
Sbjct: 455 TNNPNKNLVLASASFDSTVKLWD---VELGKLLYSLNGHRDRVYSVAFSPNGEYIASGSP 625
Query: 179 DNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMVTCSSNLLMAVM 235
D S+ +W+ + + V+T ++ + +N GDK+ C +N + V+
Sbjct: 626 DRSMLIWS----LKEGKIVKTYTGDGG-----IFEVCWNKEGDKIAACFANNTVCVL 769
>TC207353 weakly similar to UP|WDR5_HUMAN (P61964) WD-repeat protein 5,
partial (58%)
Length = 898
Score = 71.2 bits (173), Expect = 4e-13
Identities = 54/187 (28%), Positives = 87/187 (45%), Gaps = 5/187 (2%)
Frame = +3
Query: 7 KEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDE 66
K V ++GH V S+ +N GT ++ S S D + +IW+ +G L E
Sbjct: 93 KCVHTIKGHTMPVTSVHYN----RDGTLII--SASHDGSCKIWD----TGTGNLLKTLIE 242
Query: 67 THTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNAS-- 124
V +SP+GK + A+ + T +W G F + GH N V ++ S
Sbjct: 243 DKAPAVSFAKFSPNGKFILAATLNDTLKLWNYGSGKF--LKIYSGHVNRVYCITSTFSVT 416
Query: 125 -GTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSY--DNS 181
G + + S D+ V+IW++Q N + L+GHT V V HPTE+ + S D +
Sbjct: 417 NGRYIVSGSEDRCVYIWDLQAKN---MIQKLEGHTDTVISVTCHPTENKIASAGLAGDRT 587
Query: 182 IKVWADE 188
++VW +
Sbjct: 588 VRVWVQD 608
Score = 60.5 bits (145), Expect = 7e-10
Identities = 30/109 (27%), Positives = 58/109 (52%)
Frame = +3
Query: 77 WSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTLLATCSRDKS 136
++P + + SFD T +W+ G +CV T++GH V SV +N GTL+ + S D S
Sbjct: 18 FNPQSSYIVSGSFDETIKVWDVKTG--KCVHTIKGHTMPVTSVHYNRDGTLIISASHDGS 191
Query: 137 VWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKVW 185
IW+ N + ++++ V K+ P +++ + ++++K+W
Sbjct: 192 CKIWDTGTGNLLK--TLIEDKAPAVSFAKFSPNGKFILAATLNDTLKLW 332
Score = 37.7 bits (86), Expect = 0.005
Identities = 20/64 (31%), Positives = 34/64 (52%)
Frame = +3
Query: 164 VKWHPTEDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKM 223
V ++P ++S S+D +IKVW D +CV T+ GHT V ++ +N G +
Sbjct: 12 VNFNPQSSYIVSGSFDETIKVW----DVKTGKCVHTI----KGHTMPVTSVHYNRDGTLI 167
Query: 224 VTCS 227
++ S
Sbjct: 168 ISAS 179
>TC216091 similar to PIR|T00593|T02480 sec13-related protein At2g30050 -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(83%)
Length = 930
Score = 70.5 bits (171), Expect = 6e-13
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 22/206 (10%)
Frame = +1
Query: 12 LEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTRT 71
L GH VW + W H + ASCS D V +W++ + W V D+ H +
Sbjct: 319 LTGHQGPVWQVAW----AHPKFGSLLASCSYDGRVIVWKEG-NQNEWTQAHVFDD-HKSS 480
Query: 72 VRSCAWSPS--GKLLATASFDAT-TAIWENVGGDFECVATLEGHENEVKSVSW---NASG 125
V S AW+P G LA S D + + G ++ + H V SVSW A G
Sbjct: 481 VNSVAWAPHELGLCLACGSSDGNISVLTARADGGWDTARIDQAHPVGVTSVSWAPSMAPG 660
Query: 126 TLLAT---------CSR--DKSVWIWEM-QPVNEFECVSVLQGHTQDVKMVKWHPT---- 169
L+ CS D +V +W++ + + +C LQ HT V+ V W P
Sbjct: 661 ALVGAGLLDPVQKLCSGGCDNTVKVWKLNNGLWKMDCFPALQMHTDWVRDVAWAPNLGLP 840
Query: 170 EDILISCSYDNSIKVWADEGDSDDWQ 195
+ + S S D + +W + D W+
Sbjct: 841 KSTIASASQDGKVIIWTVAKEGDQWE 918
Score = 66.2 bits (160), Expect = 1e-11
Identities = 53/152 (34%), Positives = 67/152 (43%), Gaps = 4/152 (2%)
Frame = +1
Query: 68 HTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNAS--G 125
H TV A GK LATAS D T I + +ATL GH+ V V+W G
Sbjct: 196 HQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTASQHLATLTGHQGPVWQVAWAHPKFG 375
Query: 126 TLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTE-DILISC-SYDNSIK 183
+LLA+CS D V +W+ NE+ V H V V W P E + ++C S D +I
Sbjct: 376 SLLASCSYDGRVIVWKEGNQNEWTQAHVFDDHKSSVNSVAWAPHELGLCLACGSSDGNIS 555
Query: 184 VWADEGDSDDWQCVQTLGQPNNGHTSTVWALS 215
V D W + G TS WA S
Sbjct: 556 VLTARADG-GWDTARIDQAHPVGVTSVSWAPS 648
Score = 50.1 bits (118), Expect = 9e-07
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Frame = +1
Query: 111 GHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKW-HPT 169
GH++ V V+ + G LAT S D ++ I + + ++ L GH V V W HP
Sbjct: 193 GHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTAS-QHLATLTGHQGPVWQVAWAHPK 369
Query: 170 -EDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWA 213
+L SCSYD + VW EG+ ++W + S WA
Sbjct: 370 FGSLLASCSYDGRVIVW-KEGNQNEWTQAHVFDDHKSSVNSVAWA 501
Score = 46.6 bits (109), Expect = 1e-05
Identities = 55/225 (24%), Positives = 87/225 (38%), Gaps = 21/225 (9%)
Frame = +1
Query: 10 QRLE-GHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDET- 67
Q++E GH D V + A + G L A+ S D T++I + A + + T
Sbjct: 178 QKVETGHQDTVHDV----AMDYYGKRL--ATASSDHTIKI----IGVSNTASQHLATLTG 327
Query: 68 HTRTVRSCAWSPS--GKLLATASFDATTAIW-ENVGGDFECVATLEGHENEVKSVSW--N 122
H V AW+ G LLA+ S+D +W E ++ + H++ V SV+W +
Sbjct: 328 HQGPVWQVAWAHPKFGSLLASCSYDGRVIVWKEGNQNEWTQAHVFDDHKSSVNSVAWAPH 507
Query: 123 ASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTE------------ 170
G LA S D ++ + + ++ + Q H V V W P+
Sbjct: 508 ELGLCLACGSSDGNISVLTARADGGWDTARIDQAHPVGVTSVSWAPSMAPGALVGAGLLD 687
Query: 171 --DILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWA 213
L S DN++KVW C L + WA
Sbjct: 688 PVQKLCSGGCDNTVKVWKLNNGLWKMDCFPALQMHTDWVRDVAWA 822
>TC211342 similar to UP|Q9LVF2 (Q9LVF2) Arabidopsis thaliana genomic DNA,
chromosome 3, P1 clone: MIL23, partial (29%)
Length = 862
Score = 70.5 bits (171), Expect = 6e-13
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 13/229 (5%)
Frame = +1
Query: 12 LEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTRT 71
L GH V +L +N A + AS S D V +W+ +GL+ + D+ +
Sbjct: 28 LNGHKGAVTTLRYNKAGS------LLASGSRDNDVILWDVVGETGLFRLRGHRDQAAKQL 189
Query: 72 VRS-------------CAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKS 118
S A SP K +A A D+T + + F+ +L GH+ V
Sbjct: 190 TVSNVSTMKMNDDALVVAISPDAKYIAVALLDSTVKV--HFADTFKFFLSLYGHKLPVLC 363
Query: 119 VSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSY 178
+ ++ G L+ T S DK++ IW + + +C + H V V++ P + S
Sbjct: 364 MDISSDGDLIVTGSADKNIKIWGL---DFGDCHKSIFAHADSVMAVQFVPKTHYVFSVGK 534
Query: 179 DNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMVTCS 227
D +K W D+D ++ + TL GH + +W L+ + GD +VT S
Sbjct: 535 DRLVKYW----DADKFELLLTL----EGHHADIWCLAVSNRGDFIVTGS 657
Score = 40.4 bits (93), Expect = 7e-04
Identities = 25/101 (24%), Positives = 45/101 (43%)
Frame = +1
Query: 41 SGDKTVRIWEQDLSSGLWACKAVLDETHTRTVRSCAWSPSGKLLATASFDATTAIWENVG 100
S DK ++IW D K++ H +V + + P + + D W+
Sbjct: 403 SADKNIKIWGLDFGD---CHKSIF--AHADSVMAVQFVPKTHYVFSVGKDRLVKYWD--A 561
Query: 101 GDFECVATLEGHENEVKSVSWNASGTLLATCSRDKSVWIWE 141
FE + TLEGH ++ ++ + G + T S D+S+ W+
Sbjct: 562 DKFELLLTLEGHHADIWCLAVSNRGDFIVTGSHDRSIRRWD 684
Score = 40.0 bits (92), Expect = 0.001
Identities = 37/143 (25%), Positives = 63/143 (43%), Gaps = 18/143 (12%)
Frame = +1
Query: 105 CVATLEGHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGH------- 157
C TL GH+ V ++ +N +G+LLA+ SRD V +W++ V E L+GH
Sbjct: 16 CETTLNGHKGAVTTLRYNKAGSLLASGSRDNDVILWDV--VGETGLFR-LRGHRDQAAKQ 186
Query: 158 -----------TQDVKMVKWHPTEDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNG 206
D +V P + D+++KV +D ++ +L G
Sbjct: 187 LTVSNVSTMKMNDDALVVAISPDAKYIAVALLDSTVKVHF----ADTFKFFLSL----YG 342
Query: 207 HTSTVWALSFNASGDKMVTCSSN 229
H V + ++ GD +VT S++
Sbjct: 343 HKLPVLCMDISSDGDLIVTGSAD 411
>TC209377 similar to UP|Q9FLX9 (Q9FLX9) Notchless protein homolog
(At5g52820), partial (33%)
Length = 669
Score = 68.6 bits (166), Expect = 2e-12
Identities = 36/118 (30%), Positives = 58/118 (48%)
Frame = +2
Query: 68 HTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTL 127
H + V +SP G+ +A+ASFD + +W G F V GH V +SW+A L
Sbjct: 122 HQQLVNHVYFSPDGQWVASASFDKSVKLWNGTTGKF--VTAFRGHVGPVYQISWSADSRL 295
Query: 128 LATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKVW 185
L + S+D ++ +W+ + + L GH +V V W P + + S D +K+W
Sbjct: 296 LLSGSKDSTLKVWD---IRTRKLKQDLPGHADEVFSVDWSPDGEKVASGGKDKVLKLW 460
Score = 50.8 bits (120), Expect = 5e-07
Identities = 32/117 (27%), Positives = 57/117 (48%)
Frame = +2
Query: 109 LEGHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHP 168
+ GH+ V V ++ G +A+ S DKSV +W +F V+ +GH V + W
Sbjct: 113 MTGHQQLVNHVYFSPDGQWVASASFDKSVKLWN-GTTGKF--VTAFRGHVGPVYQISWSA 283
Query: 169 TEDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMVT 225
+L+S S D+++KVW + L Q GH V+++ ++ G+K+ +
Sbjct: 284 DSRLLLSGSKDSTLKVWDIR--------TRKLKQDLPGHADEVFSVDWSPDGEKVAS 430
Score = 29.6 bits (65), Expect = 1.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 10 QRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIW 49
Q L GH D V+S+DW+P AS DK +++W
Sbjct: 359 QDLPGHADEVFSVDWSPDGEKV------ASGGKDKVLKLW 460
Score = 29.3 bits (64), Expect = 1.6
Identities = 20/81 (24%), Positives = 37/81 (44%)
Frame = +2
Query: 154 LQGHTQDVKMVKWHPTEDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWA 213
+ GH Q V V + P + S S+D S+K+W G + + GH V+
Sbjct: 113 MTGHQQLVNHVYFSPDGQWVASASFDKSVKLW--NGTTGKFVTA------FRGHVGPVYQ 268
Query: 214 LSFNASGDKMVTCSSNLLMAV 234
+S++A +++ S + + V
Sbjct: 269 ISWSADSRLLLSGSKDSTLKV 331
>BI784574 similar to GP|16323188|gb AT5g67320/K8K14_4 {Arabidopsis thaliana},
partial (22%)
Length = 426
Score = 67.0 bits (162), Expect = 7e-12
Identities = 35/124 (28%), Positives = 59/124 (47%)
Frame = +2
Query: 68 HTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTL 127
H + S W+ G L + S D T +W G+++ + E H V W +
Sbjct: 23 HRGPIFSLKWNKKGDYLLSGSVDKTAIVWNIKTGEWKQL--FEFHTGPTLDVDWR-NNVS 193
Query: 128 LATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKVWAD 187
ATCS DK + + + + E + GH +V +KW P+ +L SCS D++ K+W+
Sbjct: 194 FATCSTDKMIHVCK---IGENRPIKTFSGHQDEVNAIKWDPSGSLLASCSDDHTAKIWSL 364
Query: 188 EGDS 191
+ D+
Sbjct: 365 KQDN 376
Score = 58.9 bits (141), Expect = 2e-09
Identities = 41/135 (30%), Positives = 63/135 (46%)
Frame = +2
Query: 12 LEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTRT 71
L H ++SL WN + S S DKT +W ++ +G W L E HT
Sbjct: 14 LNKHRGPIFSLKWNKKGDY------LLSGSVDKTAIVW--NIKTGEWK---QLFEFHTGP 160
Query: 72 VRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTLLATC 131
W + AT S D + + G+ + T GH++EV ++ W+ SG+LLA+C
Sbjct: 161 TLDVDWR-NNVSFATCSTDKMIHVCKI--GENRPIKTFSGHQDEVNAIKWDPSGSLLASC 331
Query: 132 SRDKSVWIWEMQPVN 146
S D + IW ++ N
Sbjct: 332 SDDHTAKIWSLKQDN 376
Score = 34.3 bits (77), Expect = 0.050
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 5 ELKEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIW 49
E + ++ GH D V ++ W+P+ + ASCS D T +IW
Sbjct: 242 ENRPIKTFSGHQDEVNAIKWDPSGS------LLASCSDDHTAKIW 358
>TC207267 similar to UP|Q8GTM1 (Q8GTM1) WD40, partial (53%)
Length = 1254
Score = 66.6 bits (161), Expect = 9e-12
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 4/175 (2%)
Frame = +2
Query: 15 HNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTRTVRS 74
H D +++DW+P P AS + + +WE S+G W HT +V
Sbjct: 209 HKDEGYAIDWSPL-----VPGKLASGDCNNCIYLWE-PTSAGTWNVDNAPFIGHTASVED 370
Query: 75 CAWSPS-GKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWN-ASGTLLATCS 132
WSP+ + A+ S D AIW+ G A+ + H +V +SWN + +LA+ S
Sbjct: 371 LQWSPTESHVFASCSVDGNIAIWDTRLGK-SPAASFKAHNADVNVMSWNRLASCMLASGS 547
Query: 133 RDKSVWIWEMQPVNEFE-CVSVLQGHTQDVKMVKWHPTE-DILISCSYDNSIKVW 185
D ++ I +++ + E + V+ + H + ++W P E L S DN + +W
Sbjct: 548 DDGTISIRDLRLLKEGDSVVAHFEYHKHPITSIEWSPHEASSLAVSSSDNQLTIW 712
Score = 53.9 bits (128), Expect = 6e-08
Identities = 41/134 (30%), Positives = 61/134 (44%), Gaps = 5/134 (3%)
Frame = +2
Query: 14 GHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTRTVR 73
GH V L W+P H VFASCS D + IW+ L A + H V
Sbjct: 347 GHTASVEDLQWSPTESH-----VFASCSVDGNIAIWDTRLGKS----PAASFKAHNADVN 499
Query: 74 SCAWSP-SGKLLATASFDATTAIWE---NVGGDFECVATLEGHENEVKSVSWNA-SGTLL 128
+W+ + +LA+ S D T +I + GD VA E H++ + S+ W+ + L
Sbjct: 500 VMSWNRLASCMLASGSDDGTISIRDLRLLKEGD-SVVAHFEYHKHPITSIEWSPHEASSL 676
Query: 129 ATCSRDKSVWIWEM 142
A S D + IW++
Sbjct: 677 AVSSSDNQLTIWDL 718
Score = 39.3 bits (90), Expect = 0.002
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Frame = +2
Query: 112 HENEVKSVSWNASGT-LLATCSRDKSVWIWEMQPVNEFECVSV-LQGHTQDVKMVKWHPT 169
H++E ++ W+ LA+ + +++WE + + GHT V+ ++W PT
Sbjct: 209 HKDEGYAIDWSPLVPGKLASGDCNNCIYLWEPTSAGTWNVDNAPFIGHTASVEDLQWSPT 388
Query: 170 ED-ILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMVTCSS 228
E + SCS D +I +W D + ++ H + V +S+N M+ S
Sbjct: 389 ESHVFASCSVDGNIAIW-------DTRLGKSPAASFKAHNADVNVMSWNRLASCMLASGS 547
Query: 229 N 229
+
Sbjct: 548 D 550
>TC229097 similar to PIR|T46032|T46032 WD-40 repeat regulatory protein tup1
homolog - Arabidopsis thaliana {Arabidopsis thaliana;} ,
partial (47%)
Length = 755
Score = 66.6 bits (161), Expect = 9e-12
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 5/160 (3%)
Frame = +1
Query: 36 VFASCSGDKTVRIWEQDLSSGLWACKAVLDETHTRTVRSCAWSPSGKLLATASFDATTAI 95
+ S S D RIW D S+G C L + V +SP+ K + + D T +
Sbjct: 40 LIVSSSYDGLCRIW--DASTG--HCMKTLIDDENPPVSFVKFSPNAKFILVGTLDNTLRL 207
Query: 96 WENVGGDFECVATLEGHENEVKSVSWNAS---GTLLATCSRDKSVWIWEMQPVNEFECVS 152
W G F + T GH N +S S G + S D +++W++Q + V
Sbjct: 208 WNYSTGKF--LKTYTGHVNSKYCISSTFSITNGKYIVGGSEDNCIYLWDLQ---SRKIVQ 372
Query: 153 VLQGHTQDVKMVKWHPTEDILIS--CSYDNSIKVWADEGD 190
L+GH+ V V HPTE+++ S DN++K+W + D
Sbjct: 373 KLEGHSDAVVSVSCHPTENMIASGALGNDNTVKIWTQQKD 492
Score = 32.3 bits (72), Expect = 0.19
Identities = 17/45 (37%), Positives = 24/45 (52%)
Frame = +1
Query: 7 KEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQ 51
K VQ+LEGH+D V S+ +P + + D TV+IW Q
Sbjct: 361 KIVQKLEGHSDAVVSVSCHPTE----NMIASGALGNDNTVKIWTQ 483
>TC216518 weakly similar to UP|Q9LW87 (Q9LW87) Coatomer protein complex, beta
prime; beta'-COP protein, partial (29%)
Length = 1189
Score = 66.6 bits (161), Expect = 9e-12
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 5/224 (2%)
Frame = +1
Query: 5 ELKEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVL 64
+++++ H D + SL +P + S S D+ +++W W+C
Sbjct: 313 KMEKIVEFAEHKDYIRSLAVHPVLPYV------ISASDDQVLKLWNWRKG---WSCYENF 465
Query: 65 DETHTRTVRSCAWSPSG-KLLATASFDATTAIW--ENVGGDFECVATLEGHENEVKSVSW 121
E H+ V A++P A+AS D T IW ++ +F TLEGH+ V V +
Sbjct: 466 -EGHSHYVMQVAFNPKDPSTFASASLDGTLKIWSLDSSAPNF----TLEGHQKGVNCVDY 630
Query: 122 NASGT--LLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYD 179
+ L + S D + +W+ N CV L+GH +V + HP I+I+ S D
Sbjct: 631 FITNDKQYLLSGSDDYTAKVWDYHSRN---CVQTLEGHENNVTAICAHPELPIIITASED 801
Query: 180 NSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKM 223
+++K+W D+ ++ TL N VW++ + ++
Sbjct: 802 STVKIW----DAVTYRLQTTL----NFGLKRVWSIGYKKGSSQL 909
Score = 30.0 bits (66), Expect = 0.95
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 138 WIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKVW 185
+++ M+ FE +T VK V HPTE ++ Y +I +W
Sbjct: 34 FVYNMEQTLSFEFEHEFVQNTARVKSVDMHPTEPWILLGLYSGTISIW 177
>TC206061 weakly similar to UP|Q9FNN2 (Q9FNN2) WD-repeat protein-like,
partial (36%)
Length = 657
Score = 66.2 bits (160), Expect = 1e-11
Identities = 42/137 (30%), Positives = 70/137 (50%), Gaps = 2/137 (1%)
Frame = +3
Query: 66 ETHTRTVRSCAWSPSGKLLATASFDATTAIWE-NVGGDFECVATLEGHENEVKSVSWNAS 124
E H V +S +GK LA+AS D + IWE ++ G+ L GH+ V SVSW+ +
Sbjct: 201 EAHDDEVWYVQFSHNGKYLASASNDRSAIIWEVDMNGELSVKHKLSGHQKPVSSVSWSPN 380
Query: 125 GTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKV 184
L TC +++V W+ V+ C+ V + + + W P+ ++S D SI +
Sbjct: 381 DQELLTCGVEEAVRRWD---VSTGTCLQVYEKNGPGLISCAWFPSGKYILSGLSDKSICM 551
Query: 185 WADEG-DSDDWQCVQTL 200
W +G + + W+ +TL
Sbjct: 552 WDLDGKEVESWKGQRTL 602
Score = 62.8 bits (151), Expect = 1e-10
Identities = 32/104 (30%), Positives = 50/104 (47%)
Frame = +3
Query: 109 LEGHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHP 168
LE H++EV V ++ +G LA+ S D+S IWE+ E L GH + V V W P
Sbjct: 198 LEAHDDEVWYVQFSHNGKYLASASNDRSAIIWEVDMNGELSVKHKLSGHQKPVSSVSWSP 377
Query: 169 TEDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVW 212
+ L++C + +++ W D C+Q + G S W
Sbjct: 378 NDQELLTCGVEEAVRRW----DVSTGTCLQVYEKNGPGLISCAW 497
Score = 59.3 bits (142), Expect = 1e-09
Identities = 41/136 (30%), Positives = 68/136 (49%)
Frame = +3
Query: 7 KEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDE 66
+ +Q LE H+D VW + ++ H G L AS S D++ IWE D++ L + K L
Sbjct: 183 RTLQILEAHDDEVWYVQFS----HNGKYL--ASASNDRSAIIWEVDMNGEL-SVKHKL-S 338
Query: 67 THTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGT 126
H + V S +WSP+ + L T + W+ G C+ E + + S +W SG
Sbjct: 339 GHQKPVSSVSWSPNDQELLTCGVEEAVRRWDVSTG--TCLQVYEKNGPGLISCAWFPSGK 512
Query: 127 LLATCSRDKSVWIWEM 142
+ + DKS+ +W++
Sbjct: 513 YILSGLSDKSICMWDL 560
Score = 46.2 bits (108), Expect = 1e-05
Identities = 30/100 (30%), Positives = 47/100 (47%)
Frame = +3
Query: 5 ELKEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVL 64
EL +L GH V S+ W+P +C ++ VR W D+S+G C V
Sbjct: 312 ELSVKHKLSGHQKPVSSVSWSP------NDQELLTCGVEEAVRRW--DVSTG--TCLQVY 461
Query: 65 DETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFE 104
++ + SCAW PSGK + + D + +W+ G + E
Sbjct: 462 EKNGPGLI-SCAWFPSGKYILSGLSDKSICMWDLDGKEVE 578
>TC228588 similar to UP|Q6NLV4 (Q6NLV4) At5g13480, partial (29%)
Length = 1178
Score = 64.3 bits (155), Expect = 5e-11
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Frame = +1
Query: 111 GHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHP-T 169
GH+N V V WN +G + T S+D+ + +++++ + E E +GH +DV + WHP
Sbjct: 7 GHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELES---FRGHRKDVTTLAWHPFH 177
Query: 170 EDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMVTCSSN 229
E+ +S SYD SI W ++ + +N H + VW L+++ G + + SS+
Sbjct: 178 EEYFVSGSYDGSIFHWLVGHETPQIEI-------SNAHDNNVWDLAWHPIGYLLCSGSSD 336
Score = 45.8 bits (107), Expect = 2e-05
Identities = 33/129 (25%), Positives = 56/129 (42%), Gaps = 4/129 (3%)
Frame = +1
Query: 68 HTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLE---GHENEVKSVSWNA- 123
H TV W+ +G + TAS D ++ D + LE GH +V +++W+
Sbjct: 10 HKNTVLCVKWNQNGNWVLTASKDQIIKLY-----DIRAMKELESFRGHRKDVTTLAWHPF 174
Query: 124 SGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIK 183
+ S D S++ W + +E + + H +V + WHP +L S S D++ K
Sbjct: 175 HEEYFVSGSYDGSIFHWLVG--HETPQIEISNAHDNNVWDLAWHPIGYLLCSGSSDHTTK 348
Query: 184 VWADEGDSD 192
W D
Sbjct: 349 FWCRNRPGD 375
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Frame = +1
Query: 6 LKEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLD 65
+KE++ GH V +L W+P F S S D ++ W G + +
Sbjct: 109 MKELESFRGHRKDVTTLAWHPFHEE-----YFVSGSYDGSIFHW----LVGHETPQIEIS 261
Query: 66 ETHTRTVRSCAWSPSGKLLATASFDATTAIW-ENVGGD 102
H V AW P G LL + S D TT W N GD
Sbjct: 262 NAHDNNVWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGD 375
Score = 27.7 bits (60), Expect = 4.7
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +1
Query: 5 ELKEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSG--DKTVRIW 49
E +++ H++ VW L W+ P+ + CSG D T + W
Sbjct: 238 ETPQIEISNAHDNNVWDLAWH--------PIGYLLCSGSSDHTTKFW 354
>TC206060 weakly similar to UP|Q9FNN2 (Q9FNN2) WD-repeat protein-like,
partial (62%)
Length = 1510
Score = 63.9 bits (154), Expect = 6e-11
Identities = 40/137 (29%), Positives = 66/137 (47%), Gaps = 2/137 (1%)
Frame = +3
Query: 66 ETHTRTVRSCAWSPSGKLLATASFDATTAIWE-NVGGDFECVATLEGHENEVKSVSWNAS 124
E H V +S +GK LA+AS D T IWE + G L GH+ V SVSW+ +
Sbjct: 414 EAHDDEVWYVQFSHNGKYLASASKDQTAIIWEVGINGRLSVKHRLSGHQKPVSSVSWSPN 593
Query: 125 GTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILISCSYDNSIKV 184
L TC ++++ W+ V+ +C+ + + + W P ++ D SI +
Sbjct: 594 DQELLTCGVEEAIRRWD---VSTGKCLQIYEKAGAGLVSCSWFPCGKYILCGLSDKSICM 764
Query: 185 WADEG-DSDDWQCVQTL 200
W +G + + W+ +TL
Sbjct: 765 WELDGKEVESWKGQKTL 815
Score = 59.3 bits (142), Expect = 1e-09
Identities = 31/104 (29%), Positives = 51/104 (48%)
Frame = +3
Query: 109 LEGHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHP 168
LE H++EV V ++ +G LA+ S+D++ IWE+ L GH + V V W P
Sbjct: 411 LEAHDDEVWYVQFSHNGKYLASASKDQTAIIWEVGINGRLSVKHRLSGHQKPVSSVSWSP 590
Query: 169 TEDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVW 212
+ L++C + +I+ W D +C+Q + G S W
Sbjct: 591 NDQELLTCGVEEAIRRW----DVSTGKCLQIYEKAGAGLVSCSW 710
Score = 55.5 bits (132), Expect = 2e-08
Identities = 40/136 (29%), Positives = 63/136 (45%)
Frame = +3
Query: 7 KEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDE 66
+ +Q LE H+D VW + ++ H G L AS S D+T IWE ++ L +
Sbjct: 396 RTLQILEAHDDEVWYVQFS----HNGKYL--ASASKDQTAIIWEVGINGRLSVKHRL--S 551
Query: 67 THTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGT 126
H + V S +WSP+ + L T + W+ G +C+ E + S SW G
Sbjct: 552 GHQKPVSSVSWSPNDQELLTCGVEEAIRRWDVSTG--KCLQIYEKAGAGLVSCSWFPCGK 725
Query: 127 LLATCSRDKSVWIWEM 142
+ DKS+ +WE+
Sbjct: 726 YILCGLSDKSICMWEL 773
Score = 52.4 bits (124), Expect = 2e-07
Identities = 45/167 (26%), Positives = 73/167 (42%), Gaps = 20/167 (11%)
Frame = +3
Query: 39 SCSGDKTVRIWEQDLSSG----LWACKA---VLDETHTR---------TVRSCAWSPSGK 82
S G KT++I + +++ L CKA +L T+ T+ S + S K
Sbjct: 792 SWKGQKTLKISDLEITDDGEEILSICKANVVLLFNRETKDERFIEEYETITSFSLSNDNK 971
Query: 83 LLATASFDATTAIWENVGGDFECVATLEGHENE---VKSVSWNASGTLLATCSRDKSVWI 139
L + +W N+ GD + V +GH+ ++S +A+ S D V+I
Sbjct: 972 FLLVNLLNQEIHLW-NIEGDPKLVGKYKGHKRARFIIRSCFGGLKQAFIASGSEDSQVYI 1148
Query: 140 WEMQPVNEFECVSVLQGHTQDVKMVKWHPTE-DILISCSYDNSIKVW 185
W + E + L GH+ V V W+P +L S S D +I+VW
Sbjct: 1149WHR---SSGELIEALTGHSGSVNCVSWNPANPHMLASASDDRTIRVW 1280
Score = 43.1 bits (100), Expect = 1e-04
Identities = 30/102 (29%), Positives = 47/102 (45%)
Frame = +3
Query: 3 RLELKEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKA 62
RL +K RL GH V S+ W+P +C ++ +R W D+S+G C
Sbjct: 525 RLSVKH--RLSGHQKPVSSVSWSP------NDQELLTCGVEEAIRRW--DVSTG--KCLQ 668
Query: 63 VLDETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFE 104
+ ++ V SC+W P GK + D + +WE G + E
Sbjct: 669 IYEKAGAGLV-SCSWFPCGKYILCGLSDKSICMWELDGKEVE 791
Score = 37.4 bits (85), Expect = 0.006
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 9 VQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIW 49
++ L GH+ V + WNPA H + AS S D+T+R+W
Sbjct: 1173 IEALTGHSGSVNCVSWNPANPH-----MLASASDDRTIRVW 1280
>TC222379 homologue to UP|Q9HGV7 (Q9HGV7) Gbeta like protein, partial (84%)
Length = 950
Score = 62.4 bits (150), Expect = 2e-10
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Frame = +1
Query: 68 HTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTL 127
H+ V C S G ++S+D T +WE G + GH N+V SVS++A
Sbjct: 31 HSHIVSDCVISSDGAYALSSSWDKTLRLWELSTG--QTTRRFVGHNNDVLSVSFSADNRQ 204
Query: 128 LATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKW--HPTEDILISCSYDNSIKVW 185
+ + SRD+++ +W + + + +GHT+ V V++ +P +++S +D +KVW
Sbjct: 205 IVSGSRDRTIKLW--NTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKFVKVW 378
Score = 49.7 bits (117), Expect = 1e-06
Identities = 43/149 (28%), Positives = 65/149 (42%), Gaps = 2/149 (1%)
Frame = +1
Query: 39 SCSGDKTVRIWEQDLSSGLWACKAVLDETHTRTVRSCAWSPSGKLLATASFDATTAIWEN 98
S S DKT+R+WE LS+G + V H V S ++S + + + S D T +W N
Sbjct: 85 SSSWDKTLRLWE--LSTGQTTRRFV---GHNNDVLSVSFSADNRQIVSGSRDRTIKLW-N 246
Query: 99 VGGDFECVATLEGHENEVKSV--SWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQG 156
GD + T +GH V V S N ++ + DK V +WE+ + G
Sbjct: 247 TLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKFVKVWELATC---RIQTDHIG 417
Query: 157 HTQDVKMVKWHPTEDILISCSYDNSIKVW 185
HT + V P + S D + +W
Sbjct: 418 HTGYINTVTISPDGSLCASGGKDGTTMLW 504
Score = 43.5 bits (101), Expect = 8e-05
Identities = 32/121 (26%), Positives = 54/121 (44%)
Frame = +1
Query: 108 TLEGHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWH 167
+L GH + V ++ G + S DK++ +WE+ + + GH DV V +
Sbjct: 19 SLHGHSHIVSDCVISSDGAYALSSSWDKTLRLWEL---STGQTTRRFVGHNNDVLSVSFS 189
Query: 168 PTEDILISCSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASGDKMVTCS 227
++S S D +IK+W GD C T+ + GHT V + F+ + V S
Sbjct: 190 ADNRQIVSGSRDRTIKLWNTLGD-----CKYTI--TDKGHTEWVSCVRFSPNPQNPVIVS 348
Query: 228 S 228
+
Sbjct: 349 A 351
Score = 39.7 bits (91), Expect = 0.001
Identities = 45/188 (23%), Positives = 69/188 (35%), Gaps = 15/188 (7%)
Frame = +1
Query: 13 EGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDET-HTRT 71
+GH + V + ++P + V S DK V++WE L C+ D HT
Sbjct: 280 KGHTEWVSCVRFSPNPQNP----VIVSAGWDKFVKVWE------LATCRIQTDHIGHTGY 429
Query: 72 VRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNASGTLLATC 131
+ + SP G L A+ D TT +W+ + + G E S N AT
Sbjct: 430 INTVTISPDGSLCASGGKDGTTMLWD-LNESKHLYSLTAGDEIHALVFSPNRYWXCAATS 606
Query: 132 SR------DKSVWIWEMQP--------VNEFECVSVLQGHTQDVKMVKWHPTEDILISCS 177
S +K + E++P E EC+S + W L +
Sbjct: 607 SSIIVFDLEKKSKVDELKPEYVEVGKKAREPECIS-----------LAWSADGQTLFAGY 753
Query: 178 YDNSIKVW 185
DN I+ W
Sbjct: 754 TDNKIRAW 777
>TC228105 similar to GB|AAP37692.1|30725340|BT008333 At4g29830 {Arabidopsis
thaliana;} , complete
Length = 1113
Score = 62.0 bits (149), Expect = 2e-10
Identities = 58/197 (29%), Positives = 87/197 (43%), Gaps = 17/197 (8%)
Frame = +3
Query: 6 LKEVQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLD 65
LK V+ H+D VW++ W PAT A P + + S D+TVR+W D VLD
Sbjct: 12 LKSVEN--AHDDSVWAVTWVPAT--ANRPPLLLTGSLDETVRLWRSD--------DLVLD 155
Query: 66 ET---HTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWN 122
T H V S A P G + A++S D+ +++ +ATLE +EV + ++
Sbjct: 156 RTNTGHCLGVASVAAHPLGSVAASSSLDSFVRVFDVDSN--ATIATLEAPPSEVWQMRFD 329
Query: 123 ASGTLLATC-SRDKSVWIWEMQPVNEFECVSVL-------------QGHTQDVKMVKWHP 168
G +LA SV +W+ + +E V+ L G + V V W P
Sbjct: 330 PKGAILAVAGGGSASVKLWD---TSSWELVATLSIPRPEGQKPTDKSGSKKFVLSVAWSP 500
Query: 169 TEDILISCSYDNSIKVW 185
L S D +I V+
Sbjct: 501 DGKRLACGSMDGTISVF 551
Score = 60.5 bits (145), Expect = 7e-10
Identities = 62/225 (27%), Positives = 100/225 (43%), Gaps = 13/225 (5%)
Frame = +3
Query: 9 VQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVL---- 64
+ LE VW + ++P G L A G +V++W D SS W A L
Sbjct: 279 IATLEAPPSEVWQMRFDPK----GAILAVAG-GGSASVKLW--DTSS--WELVATLSIPR 431
Query: 65 -------DETHTRT-VRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATLEGHENEV 116
D++ ++ V S AWSP GK LA S D T ++++ F + LEGH V
Sbjct: 432 PEGQKPTDKSGSKKFVLSVAWSPDGKRLACGSMDGTISVFDVPRAKF--LHHLEGHFMPV 605
Query: 117 KSVSWNA-SGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILIS 175
+S+ ++ LL T S D +V +++ + + + GH V V P + +
Sbjct: 606 RSLVYSPYDPRLLFTASDDGNVHMYDAEGK---ALIGTMSGHASWVLCVDVSPDGAAIAT 776
Query: 176 CSYDNSIKVWADEGDSDDWQCVQTLGQPNNGHTSTVWALSFNASG 220
S D S+++W D + VQT+ + H+ VW ++F G
Sbjct: 777 GSSDRSVRLW----DLNMRASVQTM----SNHSDQVWGVAFRPPG 887
Score = 47.8 bits (112), Expect = 4e-06
Identities = 40/127 (31%), Positives = 60/127 (46%), Gaps = 7/127 (5%)
Frame = +3
Query: 66 ETHTRTVRSCAWSP-SGKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNAS 124
E H VRS +SP +LL TAS D +++ G + T+ GH + V V +
Sbjct: 585 EGHFMPVRSLVYSPYDPRLLFTASDDGNVHMYDAEGKAL--IGTMSGHASWVLCVDVSPD 758
Query: 125 GTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPT--EDI----LISCSY 178
G +AT S D+SV +W++ N V + H+ V V + P D+ L S S
Sbjct: 759 GAAIATGSSDRSVRLWDL---NMRASVQTMSNHSDQVWGVAFRPPGGSDVRGGRLASVSD 929
Query: 179 DNSIKVW 185
D SI ++
Sbjct: 930 DKSISLY 950
Score = 29.6 bits (65), Expect = 1.2
Identities = 13/42 (30%), Positives = 23/42 (53%)
Frame = +3
Query: 9 VQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWE 50
VQ + H+D+VW + + P G AS S DK++ +++
Sbjct: 828 VQTMSNHSDQVWGVAFRPPGGSDVRGGRLASVSDDKSISLYD 953
>TC220207 similar to UP|Q6H975 (Q6H975) STY-L protein, partial (43%)
Length = 1244
Score = 60.8 bits (146), Expect = 5e-10
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Frame = +3
Query: 50 EQDLSSGLWACKAVLDETHTRTVRSCAWSPSGKLLATASFDATTAIWENVGGDFECVATL 109
+++ S G + T V C +S GK LA+A D IW E +T
Sbjct: 354 QKESSKGFTFAEVGCRRTRNSKVTCCHFSSDGKWLASAGDDMKVDIWNM--DTLETESTP 527
Query: 110 EGHENEVKSVSWNASGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPT 169
H++ + V + + + LAT S DKSV +W+ N C+ GH+ + + +HP
Sbjct: 528 AEHKSVITDVRFRPNSSQLATASTDKSVRLWD--TTNPSRCLQEYSGHSSAIMSLDFHPK 701
Query: 170 E-DILISCSYDNSIKVW 185
+ ++ C +N I+ W
Sbjct: 702 KTELFCFCDGENEIRYW 752
Score = 46.6 bits (109), Expect = 1e-05
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 5/171 (2%)
Frame = +3
Query: 9 VQRLEGHNDRVWSLDWNPATGHAGTPLVFASCSGDKTVRIWEQDLSSGLWACKAVLDETH 68
+Q GH+ + SLD++P +F C G+ +R W + T
Sbjct: 645 LQEYSGHSSAIMSLDFHPKKTE-----LFCFCDGENEIRYWN------------INSATC 773
Query: 69 TRTVRSCA----WSPS-GKLLATASFDATTAIWENVGGDFECVATLEGHENEVKSVSWNA 123
TR + + + P G+ LA AS D +I++ V D + + TL+GH V + W+
Sbjct: 774 TRVTKGASAQVRFQPRLGRFLAAAS-DKGVSIFD-VESDTQ-IYTLQGHPEPVSYICWDG 944
Query: 124 SGTLLATCSRDKSVWIWEMQPVNEFECVSVLQGHTQDVKMVKWHPTEDILI 174
+G LA+ S V +W + + EC+ + +HP+ L+
Sbjct: 945 NGDALASVS-PNLVKVWSL--TSGGECIHEFSSTGSQLHSCVFHPSYSTLL 1088
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.316 0.129 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,238,269
Number of Sequences: 63676
Number of extensions: 244801
Number of successful extensions: 1712
Number of sequences better than 10.0: 196
Number of HSP's better than 10.0 without gapping: 1193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1482
length of query: 235
length of database: 12,639,632
effective HSP length: 94
effective length of query: 141
effective length of database: 6,654,088
effective search space: 938226408
effective search space used: 938226408
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Lotus: description of TM0010.22