TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0004a.6
         (418 letters)

Database: GMGI 
           63,676 sequences; 37,918,896 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC226454 similar to UP|Q84X92 (Q84X92) Phosphoethanolamine cytid...   764  0.0
TC229484 similar to UP|Q84X92 (Q84X92) Phosphoethanolamine cytid...   387  e-108
TC226453 weakly similar to UP|Q84JV7 (Q84JV7) CTP:ethanolamine c...   178  4e-45
TC226455 homologue to UP|Q84JV7 (Q84JV7) CTP:ethanolamine cytidy...   177  6e-45
BF009812                                                              124  8e-29
TC211408 similar to UP|Q8L4J8 (Q8L4J8) CTP:phosphorylcholine cyt...   114  6e-26
BE805781                                                               59  5e-09
TC229485 similar to UP|Q84X92 (Q84X92) Phosphoethanolamine cytid...    46  3e-05

>TC226454 similar to UP|Q84X92 (Q84X92) Phosphoethanolamine
           cytidylyltransferase, partial (71%)
          Length = 1889

 Score =  764 bits (1972), Expect = 0.0
 Identities = 373/420 (88%), Positives = 398/420 (93%), Gaps = 2/420 (0%)
 Frame = +1

Query: 1   MDYESNSWIWEGVYYYPHLFGGLMVTAALLGLSTSYFGGIG--HLPLPFPWSNSGIFHKK 58
           MDYE+NSWIWEGV YYP +FGGLMVTAALLGLSTSYFGGIG  +L LP  WSN GIFHKK
Sbjct: 223 MDYENNSWIWEGVNYYPRVFGGLMVTAALLGLSTSYFGGIGVPYLSLPCSWSNLGIFHKK 402

Query: 59  KSGKRRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGLVNDEEILATKGPPVLTMAER 118
           KSGKRR+RVYMDGCFDLMHYGHANALRQAKALGDELVVGLV+DEEI+A KGPPVL+M ER
Sbjct: 403 KSGKRRIRVYMDGCFDLMHYGHANALRQAKALGDELVVGLVSDEEIVANKGPPVLSMEER 582

Query: 119 LALVSGLKWVDEVITDAPYAITEQFLHRLFHEYKIDYVIHGDDPCLLPDGTDAYAAAKKA 178
           LALVSGLKWVDEVITDAPYAITEQFL+RLFHEYKIDYVIHGDDPCLLPDGTDAYAAAKKA
Sbjct: 583 LALVSGLKWVDEVITDAPYAITEQFLNRLFHEYKIDYVIHGDDPCLLPDGTDAYAAAKKA 762

Query: 179 GRYKQIKRTEGVSSTDIVGRIMSSLKDQKTCEDQNGTDVKRQEESMSKDSHISQFLPTSR 238
           GRYKQIKRTEGVSSTDIVGRI+SSL+DQK CED NGT+VK QEE+ S+ SHI+QFLPTSR
Sbjct: 763 GRYKQIKRTEGVSSTDIVGRILSSLRDQKNCEDHNGTEVKPQEENQSQASHIAQFLPTSR 942

Query: 239 RIVQFSNGKGPGPNARIVYIDGAFDLFHAGHVEILKRARELGDFLLVGIHSDETVSEHRG 298
           RIVQFSNGKGPGPN+RIVYIDGAFDLFHAGHVEILKRARELGDFLLVGIHSDETVSEHRG
Sbjct: 943 RIVQFSNGKGPGPNSRIVYIDGAFDLFHAGHVEILKRARELGDFLLVGIHSDETVSEHRG 1122

Query: 299 NHYPIMHLHERSLSVLACRHVDEVIIGAPWEITKDMITTFNISLVVHGTVAEKSLHSERD 358
           NHYPIMHLHERSLSVLACR+VDEVIIG+PWEIT DMITTFNIS+VVHGTVAEK+L+ E D
Sbjct: 1123NHYPIMHLHERSLSVLACRYVDEVIIGSPWEITNDMITTFNISVVVHGTVAEKTLNCELD 1302

Query: 359 PYEVPKSMGMFRLLESPKDITTTTVAQRILANHEAYEKRNAKKSQSEKRYYEEKNYVSGD 418
           PYEVPKSMG+F LLESPKDITT TVAQRI+ANHEAY KRNAKK++SE+RYYEEK YVSGD
Sbjct: 1303PYEVPKSMGIFHLLESPKDITTATVAQRIMANHEAYVKRNAKKTRSEQRYYEEKKYVSGD 1482


>TC229484 similar to UP|Q84X92 (Q84X92) Phosphoethanolamine
           cytidylyltransferase, partial (61%)
          Length = 947

 Score =  387 bits (993), Expect = e-108
 Identities = 193/287 (67%), Positives = 235/287 (81%), Gaps = 16/287 (5%)
 Frame = +2

Query: 146 RLFHEYKIDYVIHGDDPCLLPDGTDAYAAAKKAGRYKQIKRTEGVSSTDIVGRIMSSLKD 205
           +LF EYKID++IHGDDPC+LPDGTDAYA AKKAGRYKQIKRTEGVSSTDIVGR++  +++
Sbjct: 2   KLFDEYKIDFIIHGDDPCVLPDGTDAYAHAKKAGRYKQIKRTEGVSSTDIVGRMLLCVRE 181

Query: 206 QKTCE-DQNGTDVKRQ-------------EESMSKDSHISQFLPTSRRIVQFSNGKGPGP 251
           +   E + N + ++RQ               + +  + IS FLPTSRRIVQFSNG+GPGP
Sbjct: 182 RSIAEKNHNHSSLQRQFSNGHSPKFEAGVSAATASGTRISHFLPTSRRIVQFSNGRGPGP 361

Query: 252 NARIVYIDGAFDLFHAGHVEILKRARELGDFLLVGIHSDETVSEHRGNHYPIMHLHERSL 311
           ++ IVYIDGAFDLFHAGHVEIL+ AR+LGDFLLVGIH+D+TVS  RG+H PIM+LHERSL
Sbjct: 362 DSHIVYIDGAFDLFHAGHVEILRLARDLGDFLLVGIHTDQTVSATRGSHRPIMNLHERSL 541

Query: 312 SVLACRHVDEVIIGAPWEITKDMITTFNISLVVHGTVAEKS--LHSERDPYEVPKSMGMF 369
           SVLACR+VDEVIIGAPWEI+KDM+TTFNISLVVHGT+AE +     E +PY VP SMG+F
Sbjct: 542 SVLACRYVDEVIIGAPWEISKDMLTTFNISLVVHGTIAESNDFKKEECNPYAVPISMGIF 721

Query: 370 RLLESPKDITTTTVAQRILANHEAYEKRNAKKSQSEKRYYEEKNYVS 416
           ++LESP DITTTT+ +RI+ NHEAY+ RN KK +SEKRYYE K++VS
Sbjct: 722 KVLESPLDITTTTIIRRIVCNHEAYQNRNKKKDESEKRYYEGKSHVS 862



 Score = 83.2 bits (204), Expect = 2e-16
 Identities = 54/171 (31%), Positives = 88/171 (50%), Gaps = 5/171 (2%)
 Frame = +2

Query: 67  VYMDGCFDLMHYGHANALRQAKALGDELVVGLVNDEEILATKGP--PVLTMAERLALVSG 124
           VY+DG FDL H GH   LR A+ LGD L+VG+  D+ + AT+G   P++ + ER   V  
Sbjct: 374 VYIDGAFDLFHAGHVEILRLARDLGDFLLVGIHTDQTVSATRGSHRPIMNLHERSLSVLA 553

Query: 125 LKWVDEVITDAPYAITEQFLHRLFHEYKIDYVIHG---DDPCLLPDGTDAYAAAKKAGRY 181
            ++VDEVI  AP+ I++  L      + I  V+HG   +      +  + YA     G +
Sbjct: 554 CRYVDEVIIGAPWEISKDML----TTFNISLVVHGTIAESNDFKKEECNPYAVPISMGIF 721

Query: 182 KQIKRTEGVSSTDIVGRIMSSLKDQKTCEDQNGTDVKRQEESMSKDSHISQ 232
           K ++    +++T I+ RI+ + +  +    +     KR  E     SH+S+
Sbjct: 722 KVLESPLDITTTTIIRRIVCNHEAYQNRNKKKDESEKRYYEG---KSHVSE 865


>TC226453 weakly similar to UP|Q84JV7 (Q84JV7) CTP:ethanolamine
           cytidylyltransferase (CTP-phosphoethanolamine
           cytidylyltransferase), partial (11%)
          Length = 620

 Score =  178 bits (452), Expect = 4e-45
 Identities = 85/102 (83%), Positives = 96/102 (93%)
 Frame = +2

Query: 317 RHVDEVIIGAPWEITKDMITTFNISLVVHGTVAEKSLHSERDPYEVPKSMGMFRLLESPK 376
           R+VDEVIIG+PWEIT DMITTFNIS+VVHGTV+EKSL+ E DPYE+PKSMG+FRLLESPK
Sbjct: 2   RYVDEVIIGSPWEITNDMITTFNISVVVHGTVSEKSLNCELDPYEIPKSMGIFRLLESPK 181

Query: 377 DITTTTVAQRILANHEAYEKRNAKKSQSEKRYYEEKNYVSGD 418
           DITT TVAQRI+ANHEAY KRNAKK++SE+RYYEEK YVSGD
Sbjct: 182 DITTATVAQRIMANHEAYVKRNAKKTRSEQRYYEEKKYVSGD 307


>TC226455 homologue to UP|Q84JV7 (Q84JV7) CTP:ethanolamine
           cytidylyltransferase (CTP-phosphoethanolamine
           cytidylyltransferase), partial (7%)
          Length = 593

 Score =  177 bits (450), Expect = 6e-45
 Identities = 85/98 (86%), Positives = 90/98 (91%), Gaps = 2/98 (2%)
 Frame = +1

Query: 1   MDYESNSWIWEGVYYYPHLFGGLMVTAALLGLSTSYFGGIG--HLPLPFPWSNSGIFHKK 58
           MDYE+NSWIWEGV YYP +FGGLMVTAALLGLSTSYFGGIG  +L LP  WSN GIFH+K
Sbjct: 298 MDYENNSWIWEGVNYYPCVFGGLMVTAALLGLSTSYFGGIGVPYLSLPCSWSNLGIFHQK 477

Query: 59  KSGKRRVRVYMDGCFDLMHYGHANALRQAKALGDELVV 96
           KSGKRR+RVYMDGCFDLMHYGHANALRQAKALGDELVV
Sbjct: 478 KSGKRRIRVYMDGCFDLMHYGHANALRQAKALGDELVV 591



 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 22/52 (42%), Positives = 29/52 (55%)
 Frame = +1

Query: 234 LPTSRRIVQFSNGKGPGPNARIVYIDGAFDLFHAGHVEILKRARELGDFLLV 285
           LP S   +   + K  G     VY+DG FDL H GH   L++A+ LGD L+V
Sbjct: 436 LPCSWSNLGIFHQKKSGKRRIRVYMDGCFDLMHYGHANALRQAKALGDELVV 591


>BF009812 
          Length = 247

 Score =  124 bits (311), Expect = 8e-29
 Identities = 60/82 (73%), Positives = 70/82 (85%)
 Frame = +2

Query: 180 RYKQIKRTEGVSSTDIVGRIMSSLKDQKTCEDQNGTDVKRQEESMSKDSHISQFLPTSRR 239
           RYKQIKRTEGVSSTDI GRI+SSL+DQK+C+D NGT+VK QEE+ S+  HI+QF+PT RR
Sbjct: 2   RYKQIKRTEGVSSTDIEGRILSSLRDQKSCDDHNGTEVKPQEENQSQAWHIAQFVPTCRR 181

Query: 240 IVQFSNGKGPGPNARIVYIDGA 261
           IVQ  NGKGP PN RI Y+DGA
Sbjct: 182 IVQL*NGKGPDPNLRIEYMDGA 247


>TC211408 similar to UP|Q8L4J8 (Q8L4J8) CTP:phosphorylcholine
           cytidylyltransferase  , partial (83%)
          Length = 870

 Score =  114 bits (286), Expect = 6e-26
 Identities = 64/142 (45%), Positives = 85/142 (59%), Gaps = 4/142 (2%)
 Frame = +2

Query: 63  RRVRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGLVNDEEILATKGPPVLTMAERLA 120
           R VRVY DG +DL H+GHA +L QAK       L+VG  ND+     KG  V+T AER  
Sbjct: 92  RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDQVTHKYKGKTVMTEAERYE 271

Query: 121 LVSGLKWVDEVITDAPYAITEQFLHRLFHEYKIDYVIHGDDPCLLPDG--TDAYAAAKKA 178
            +   KWVDEVI DAP+ I ++FL +    + IDYV H   P    +G   D Y   K  
Sbjct: 272 SLRHCKWVDEVIPDAPWVINQEFLDK----HNIDYVAHDSLPYADANGAANDVYEFVKSV 439

Query: 179 GRYKQIKRTEGVSSTDIVGRIM 200
           GR+K+ KRTEG+S++D++ RI+
Sbjct: 440 GRFKETKRTEGISTSDVIMRIV 505



 Score = 88.6 bits (218), Expect = 5e-18
 Identities = 55/164 (33%), Positives = 87/164 (52%), Gaps = 7/164 (4%)
 Frame = +2

Query: 256 VYIDGAFDLFHAGHVEILKRAREL--GDFLLVGIHSDETVSEHRGNHYPIMHLHERSLSV 313
           VY DG +DLFH GH   L++A++     +LLVG  +D+   +++G    +M   ER  S+
Sbjct: 104 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDQVTHKYKGK--TVMTEAERYESL 277

Query: 314 LACRHVDEVIIGAPWEITKDMITTFNISLVVHGTVAEKSLH-SERDPYEVPKSMGMFRLL 372
             C+ VDEVI  APW I ++ +   NI  V H ++     + +  D YE  KS+G F+  
Sbjct: 278 RHCKWVDEVIPDAPWVINQEFLDKHNIDYVAHDSLPYADANGAANDVYEFVKSVGRFKET 457

Query: 373 ESPKDITTTTVAQRILANHEAYEKRNAKKSQSEKR----YYEEK 412
           +  + I+T+ V  RI+ ++  Y  RN  +  S       Y +EK
Sbjct: 458 KRTEGISTSDVIMRIVKDYNQYVLRNLDRGYSRNELGVSYVKEK 589


>BE805781 
          Length = 156

 Score = 58.5 bits (140), Expect = 5e-09
 Identities = 26/31 (83%), Positives = 30/31 (95%)
 Frame = +1

Query: 324 IGAPWEITKDMITTFNISLVVHGTVAEKSLH 354
           IG+PWEIT DMITTFNIS+VVHGTVAEK+L+
Sbjct: 1   IGSPWEITNDMITTFNISVVVHGTVAEKTLN 93


>TC229485 similar to UP|Q84X92 (Q84X92) Phosphoethanolamine
           cytidylyltransferase, partial (7%)
          Length = 553

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 19/29 (65%), Positives = 25/29 (85%)
 Frame = +3

Query: 388 LANHEAYEKRNAKKSQSEKRYYEEKNYVS 416
           ++NHEAY+ RN KK +SEKRYYE K++VS
Sbjct: 3   VSNHEAYQNRNKKKGESEKRYYEGKSHVS 89


  Database: GMGI
    Posted date:  Oct 22, 2004  4:58 PM
  Number of letters in database: 37,918,896
  Number of sequences in database:  63,676
  
Lambda     K      H
   0.319    0.137    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,905,854
Number of Sequences: 63676
Number of extensions: 248293
Number of successful extensions: 1248
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of query: 418
length of database: 12,639,632
effective HSP length: 100
effective length of query: 318
effective length of database: 6,272,032
effective search space: 1994506176
effective search space used: 1994506176
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)