BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0002.14
(340 letters)
Database: GMGI
63,676 sequences; 37,918,896 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC219068 similar to UP|O81138 (O81138) AP2 domain family transcr... 209 1e-54
TC224501 similar to UP|Q8GZF2 (Q8GZF2) Dehydration responsive el... 110 7e-25
TC226582 similar to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding pr... 108 3e-24
TC226581 similar to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding pr... 108 5e-24
TC226585 homologue to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding ... 107 6e-24
CO980537 103 9e-23
TC226583 similar to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding pr... 103 9e-23
TC217288 homologue to GB|AAS76737.1|45773866|BT012250 At5g13330 ... 102 2e-22
TC225490 homologue to UP|Q7XAU4 (Q7XAU4) Ethylene responsive pro... 102 3e-22
TC211213 similar to PIR|T48518|T48518 transcription factor like ... 101 6e-22
TC215013 homologue to UP|Q7XAU4 (Q7XAU4) Ethylene responsive pro... 100 1e-21
TC219340 homologue to UP|ERF4_ARATH (O80340) Ethylene responsive... 97 1e-20
TC204035 homologue to UP|ERF4_ARATH (O80340) Ethylene responsive... 96 2e-20
TC204740 similar to UP|Q40478 (Q40478) Ethylene-responsive eleme... 96 2e-20
TC221817 similar to GB|AAP37839.1|30725634|BT008480 At5g64750 {A... 96 3e-20
AW706727 homologue to GP|9369375|gb|A F10A5.29 {Arabidopsis thal... 95 5e-20
TC204739 similar to UP|Q40478 (Q40478) Ethylene-responsive eleme... 95 5e-20
TC225486 similar to UP|Q70AB2 (Q70AB2) Ethylene transcription fa... 94 9e-20
TC217467 similar to UP|Q949B2 (Q949B2) AP2 domain-containing pro... 94 1e-19
TC225579 similar to UP|Q84KS7 (Q84KS7) AP2/ERF-domain protein, p... 93 2e-19
>TC219068 similar to UP|O81138 (O81138) AP2 domain family transcription
factor homolog (AP2 domain transcription factor)
(ABI4:abscisic acid-insensitive 4 ) (ABI4), partial
(25%)
Length = 1064
Score = 209 bits (532), Expect = 1e-54
Identities = 146/297 (49%), Positives = 178/297 (59%), Gaps = 32/297 (10%)
Frame = +1
Query: 75 VRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQPSPTSS 134
VRQRSWGKWVAEIREPRKRTRKWLGTF+TAEDAARAYDRAAIILYGSRAQLNLQPS S
Sbjct: 1 VRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQPS--GS 174
Query: 135 SSQSSSSSSRASSSSSSTQTLRPLLPRPSGYGFSFSGSHLPVVFSAAASGPFGFYNANNG 194
SSQSSSS SSSSSTQTLRPLLPRPSG+ F+F + P A + P+ + N++N
Sbjct: 175 SSQSSSS----RSSSSSTQTLRPLLPRPSGFTFNFPFNSAP-----ATTVPYPYNNSHN- 324
Query: 195 YMQLQP----------------QQHHFHHQEVVQSQLQPQLQQCRQPEPDVKGGG----- 233
Y P Q HH HH + ++ Q E D+ G G
Sbjct: 325 YTYTPPVLYPIDNSKNHNINTVQVHHPHHYRCPE-----EVVQVPHSESDLGGLGGNNNI 489
Query: 234 VVD-HVRSTSYQ------NQHSHHHQDQVVMQNYPVLNHQQHNQNCMGEGVSDNTLVGPS 286
VVD +RSTSYQ N +++++ V +Q+ N QQ +QN + EGV ++++VG
Sbjct: 490 VVDGSIRSTSYQRHGFLDNINNNNNHVHVQVQHGVFSNQQQQHQNSVVEGV-NSSVVGSV 666
Query: 287 LASQNFVHIDAAPMDPDPG----SGIGSPSIWPLTSTELEDYNPVCLWDYNDPFFLD 339
+S +DA+ +DPD G+GS S P S ED LWDYNDPFF D
Sbjct: 667 SSS-----MDASSVDPDLALVGTMGLGSSS--PFWSMANEDDYTGSLWDYNDPFFFD 816
>TC224501 similar to UP|Q8GZF2 (Q8GZF2) Dehydration responsive element
binding protein, partial (38%)
Length = 476
Score = 110 bits (276), Expect = 7e-25
Identities = 62/125 (49%), Positives = 81/125 (64%), Gaps = 4/125 (3%)
Frame = +1
Query: 34 SENSNSSHNNNITTPNTSTTINNRKC-KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRK 92
+E+ S +++ TTP + + C KGKGGP N++ YRGVRQR+WGKWV EIREP +
Sbjct: 97 NEHLYSGKDDSRTTPKAPAKGSKKGCMKGKGGPQNSQCNYRGVRQRTWGKWVGEIREPNR 276
Query: 93 RTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQPSPTSSSSQSSS---SSSRASSSS 149
+R WLGTFS+A++AA AYD AA +YG A+LN P T +S S S ASSS
Sbjct: 277 GSRLWLGTFSSAQEAALAYDEAARAMYGPCARLNC-PGITDYASFKESLKESPMAASSSC 453
Query: 150 SSTQT 154
SS +T
Sbjct: 454 SSAET 468
>TC226582 similar to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding protein,
partial (27%)
Length = 942
Score = 108 bits (271), Expect = 3e-24
Identities = 57/109 (52%), Positives = 70/109 (63%), Gaps = 2/109 (1%)
Frame = +3
Query: 60 KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 119
KGKGGP+N++ YRGVRQR+WGKWVAEIREP + R WLGTF TA AA AYD AA +Y
Sbjct: 297 KGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPTAIGAALAYDEAARAMY 476
Query: 120 GSRAQLNLQPSPTSSSSQSSSSSSRASS--SSSSTQTLRPLLPRPSGYG 166
GS A+LN SS S+ SS S ++ SS + + PS +G
Sbjct: 477 GSCARLNFPNVSVSSFSEESSKDSPVANHCGSSMAVSANESMISPSNFG 623
>TC226581 similar to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding protein,
partial (27%)
Length = 943
Score = 108 bits (269), Expect = 5e-24
Identities = 53/96 (55%), Positives = 66/96 (68%)
Frame = +3
Query: 60 KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 119
KGKGGP+N++ YRGVRQR+WGKWVAEIREP + R WLGTF TA AA AYD AA +Y
Sbjct: 312 KGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPTAIGAALAYDEAARAMY 491
Query: 120 GSRAQLNLQPSPTSSSSQSSSSSSRASSSSSSTQTL 155
GS A+LN SS S+ SS S +++ S+ +
Sbjct: 492 GSCARLNFPNVSVSSFSEESSKDSPSANHCGSSMAV 599
>TC226585 homologue to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding protein,
partial (23%)
Length = 549
Score = 107 bits (268), Expect = 6e-24
Identities = 52/89 (58%), Positives = 66/89 (73%)
Frame = +3
Query: 60 KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 119
KGKGGP+N++ YRGVRQR+WGKWVAEIREP + +R WLGTF TA AA AYD AA +Y
Sbjct: 48 KGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAISAALAYDEAARAMY 227
Query: 120 GSRAQLNLQPSPTSSSSQSSSSSSRASSS 148
GS A+LN S+ S+ SS +S A+++
Sbjct: 228 GSCARLNFPNVQVSTLSEESSRNSPAAAN 314
>CO980537
Length = 374
Score = 103 bits (258), Expect = 9e-23
Identities = 51/78 (65%), Positives = 58/78 (73%), Gaps = 3/78 (3%)
Frame = +2
Query: 60 KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 119
+GKGGP N YRGVRQR+WGKWVAEIREP+KR WLG+F+TAE+AA AYD AA LY
Sbjct: 80 RGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRILLWLGSFATAEEAAMAYDEAAXXLY 259
Query: 120 GSRAQLN---LQPSPTSS 134
G A LN LQP TS+
Sbjct: 260 GPDAYLNLPHLQPRSTST 313
>TC226583 similar to UP|Q9LEM7 (Q9LEM7) AP2-domain DNA-binding protein,
partial (27%)
Length = 1180
Score = 103 bits (258), Expect = 9e-23
Identities = 51/91 (56%), Positives = 64/91 (70%)
Frame = +3
Query: 60 KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 119
KGKGGP+N + YRGVRQR+WGKWVAEIREP + +R WLGTF TA AA AYD AA+ +Y
Sbjct: 363 KGKGGPENLRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAISAALAYDEAAMAMY 542
Query: 120 GSRAQLNLQPSPTSSSSQSSSSSSRASSSSS 150
G A+LN S+ S+ S +S A++ S
Sbjct: 543 GFCARLNFPNVQVSTFSEEPSRNSPAAAYQS 635
>TC217288 homologue to GB|AAS76737.1|45773866|BT012250 At5g13330 {Arabidopsis
thaliana;} , partial (33%)
Length = 1315
Score = 102 bits (254), Expect = 2e-22
Identities = 68/164 (41%), Positives = 92/164 (55%), Gaps = 22/164 (13%)
Frame = +3
Query: 11 PPQEITKPTATAAIT-TTPSETSNSENSNS------SHNNNIT---TPN----TSTTINN 56
PP E K I TPS+ + S S S+N N T TP+ TS +N+
Sbjct: 255 PPHEEKKEAFNFPIIHPTPSQNRKEQASPSPFSLLMSNNKNNTFFPTPHGQISTSEFVNS 434
Query: 57 R---KCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDR 113
+ + +G D K YRGVRQR WGKW AEIR+P+K R WLGTF TAE AA AYD
Sbjct: 435 QNPPQATNQGIDDIRKKHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAMAYDA 614
Query: 114 AAIILYGSRAQLN-----LQPSPTSSSSQSSSSSSRASSSSSST 152
AA+ G++A+LN + P P +++ +S+SSS ++ SSS+
Sbjct: 615 AALRFKGNKAKLNFPERVVMPIPPQTNNNNSTSSSAPTTQSSSS 746
>TC225490 homologue to UP|Q7XAU4 (Q7XAU4) Ethylene responsive protein,
partial (64%)
Length = 865
Score = 102 bits (253), Expect = 3e-22
Identities = 54/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Frame = +3
Query: 34 SENSNSSHNNNITTPNTSTTINNRKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKR 93
S +SN + + ++ S T+ ++ K K +YRG+RQR WGKW AEIR+PRK
Sbjct: 351 SRSSNKAASKPLS--RGSATVESKGQAEKCAKRKRKNQYRGIRQRPWGKWAAEIRDPRKG 524
Query: 94 TRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNL--QPSPTSSSSQSSSSSSRASSSSSS 151
R WLGTFSTAE+AARAYD A + G +A++N +PS ++SS+ + A +
Sbjct: 525 VRVWLGTFSTAEEAARAYDAEARRIRGKKAKVNFPDEPSGAAASSKRLKVNPEAQPMKEN 704
Query: 152 TQTLRPLLPRPSGYGFSFSGSHLPV 176
T++P + + +G + G + P+
Sbjct: 705 LNTVKPKMNQMFNFGHNLEGYYSPI 779
Score = 31.6 bits (70), Expect = 0.54
Identities = 18/35 (51%), Positives = 21/35 (59%)
Frame = -1
Query: 133 SSSSQSSSSSSRASSSSSSTQTLRPLLPRPSGYGF 167
+SSS SSSSSS +S S SS +L P S GF
Sbjct: 328 NSSSSSSSSSSTSSISESSLNSLNPASKSSSSSGF 224
>TC211213 similar to PIR|T48518|T48518 transcription factor like protein -
Arabidopsis thaliana {Arabidopsis thaliana;} , partial
(45%)
Length = 789
Score = 101 bits (251), Expect = 6e-22
Identities = 61/149 (40%), Positives = 88/149 (58%), Gaps = 22/149 (14%)
Frame = +2
Query: 28 PSETSNSENSNSSHNNNITTPNTSTTIN-------NRKCKGKGGPDNNKFR--------Y 72
P+ ++SE S+S+ N N TP+ S++ + + K DNN R Y
Sbjct: 104 PAVAASSELSDSTRNTNTNTPSPSSSSSLSPSPSPSSSSSKKRARDNNNSRNNSNKHSVY 283
Query: 73 RGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQ---- 128
RGVR R+WGKWV+EIREPRK+ R WLGTF+TAE AARA+D AA+ + GS A LN
Sbjct: 284 RGVRMRTWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDVAALTIKGSSAILNFPELAA 463
Query: 129 --PSPTSSSSQS-SSSSSRASSSSSSTQT 154
P P S+S + +++++A+S + +T
Sbjct: 464 SLPRPASNSPRDVQAAAAKAASMEAPPRT 550
>TC215013 homologue to UP|Q7XAU4 (Q7XAU4) Ethylene responsive protein,
complete
Length = 1999
Score = 100 bits (248), Expect = 1e-21
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 1/144 (0%)
Frame = +3
Query: 34 SENSNSSHNNNITTPNTSTTINNRKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKR 93
S +SN + + ++ S T+ ++ K K +YRG+RQR WGKW AEIR+PRK
Sbjct: 483 SRSSNKAASKPLS--RGSATVESKGQAEKCAKRKRKNQYRGIRQRPWGKWAAEIRDPRKG 656
Query: 94 TRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQPSPT-SSSSQSSSSSSRASSSSSST 152
R WLGTFSTAE+AARAYD A + G +A++N P+ ++SS+ ++ A +
Sbjct: 657 VRVWLGTFSTAEEAARAYDAEARRIRGKKAKVNFPDEPSGAASSKRLKANPEAQPMKKNL 836
Query: 153 QTLRPLLPRPSGYGFSFSGSHLPV 176
+++P + + +G + G + P+
Sbjct: 837 NSVKPKMNQMFNFGHNLEGYYSPI 908
Score = 31.6 bits (70), Expect = 0.54
Identities = 18/35 (51%), Positives = 21/35 (59%)
Frame = -1
Query: 133 SSSSQSSSSSSRASSSSSSTQTLRPLLPRPSGYGF 167
+SSS SSSSSS +S S SS +L P S GF
Sbjct: 460 NSSSSSSSSSSTSSISESSLNSLNPASKSSSSSGF 356
>TC219340 homologue to UP|ERF4_ARATH (O80340) Ethylene responsive element
binding factor 4 (AtERF4), partial (42%)
Length = 875
Score = 97.1 bits (240), Expect = 1e-20
Identities = 58/142 (40%), Positives = 75/142 (51%)
Frame = +2
Query: 37 SNSSHNNNITTPNTSTTINNRKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRK 96
SNSS + P N G P + + RYRGVR+R WG++ AEIR+P K+TR
Sbjct: 32 SNSSERLTLMAPRDINRSNVVVVAGVSNPTHKEIRYRGVRKRPWGRYAAEIRDPGKKTRV 211
Query: 97 WLGTFSTAEDAARAYDRAAIILYGSRAQLNLQPSPTSSSSQSSSSSSRASSSSSSTQTLR 156
WLGTF TAE+AARAYD AA G++A+ N ++ S S SS+ +SS TL
Sbjct: 212 WLGTFDTAEEAARAYDTAAREFRGTKAKTNFPTHAAAARSPSQSSTLDSSSPPPLDLTLA 391
Query: 157 PLLPRPSGYGFSFSGSHLPVVF 178
L F + PVVF
Sbjct: 392 APLTAAGALVFPVA---RPVVF 448
>TC204035 homologue to UP|ERF4_ARATH (O80340) Ethylene responsive element
binding factor 4 (AtERF4), partial (37%)
Length = 1004
Score = 96.3 bits (238), Expect = 2e-20
Identities = 65/163 (39%), Positives = 84/163 (50%), Gaps = 2/163 (1%)
Frame = +1
Query: 6 TTPHHPPQEITKPTATAAITTTPSETSNSENSNSSHNNNITTPNTSTTINNRKCKGKGGP 65
TTP P KPT TA ++ +NSS + P +N G P
Sbjct: 52 TTPLSPS---LKPTYTALLSD--QFFLGLRITNSSKKLTLMAPRDINR-SNVVVAGGSNP 213
Query: 66 DNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQL 125
+ RYRGVR+R WG++ AEIR+P K+TR WLGTF TAE+AARAYD AA G++A+
Sbjct: 214 TRKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDAAAREFRGAKAKT 393
Query: 126 NL--QPSPTSSSSQSSSSSSRASSSSSSTQTLRPLLPRPSGYG 166
N T ++++S S SS SSS T L L P G
Sbjct: 394 NFPTHAELTHAAARSPSQSSTLDSSSPPTPPLDLTLAAPLAAG 522
>TC204740 similar to UP|Q40478 (Q40478) Ethylene-responsive element binding
protein, partial (26%)
Length = 1370
Score = 96.3 bits (238), Expect = 2e-20
Identities = 59/143 (41%), Positives = 86/143 (59%), Gaps = 4/143 (2%)
Frame = +1
Query: 13 QEITKPTATAAITTTPSETSNSENSNSS---HNNNITTPNTSTTINNRKCKGKGGPDNNK 69
+ IT P+ T+ + T S+T+ + + ++ +NN +++ + S+ N K
Sbjct: 379 KNITIPSITSGLATAMSQTTATTTTIATTMYNNNQVSSSSFSSDETNNTKDDK------- 537
Query: 70 FRYRGVRQRSWGKWVAEIREP-RKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQ 128
YRGVR+R WGK+ AEIR+P RK +R WLGTF TA +AA+AYD+AA + GS+A LN
Sbjct: 538 -HYRGVRRRPWGKYAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDKAAFKMRGSKAILNFP 714
Query: 129 PSPTSSSSQSSSSSSRASSSSSS 151
S S+ SSSS +S SSSS
Sbjct: 715 LEIGSDQSKEESSSSSSSVSSSS 783
>TC221817 similar to GB|AAP37839.1|30725634|BT008480 At5g64750 {Arabidopsis
thaliana;} , partial (24%)
Length = 1008
Score = 95.5 bits (236), Expect = 3e-20
Identities = 60/151 (39%), Positives = 77/151 (50%)
Frame = +1
Query: 2 DDATTTPHHPPQEITKPTATAAITTTPSETSNSENSNSSHNNNITTPNTSTTINNRKCKG 61
D T + HPP P+ +++E S S N + T T N +K +G
Sbjct: 361 DTYTPSFSHPPSSF------------PAMPTSAECSKSGMGNAVYEYRTRGTENVKKEEG 504
Query: 62 KGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGS 121
+ +YRGVRQR WGKW AEIR+P K R WLGTF TAE AARAYD AA+ GS
Sbjct: 505 RR-------KYRGVRQRPWGKWAAEIRDPFKAARVWLGTFETAEAAARAYDEAALRFRGS 663
Query: 122 RAQLNLQPSPTSSSSQSSSSSSRASSSSSST 152
+A+LN + T Q + S+S S T
Sbjct: 664 KAKLNFPENVTLRQPQFTVSTSTDPFQLSGT 756
>AW706727 homologue to GP|9369375|gb|A F10A5.29 {Arabidopsis thaliana},
partial (38%)
Length = 436
Score = 94.7 bits (234), Expect = 5e-20
Identities = 45/68 (66%), Positives = 51/68 (74%)
Frame = +1
Query: 60 KGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILY 119
+GKGGP+N Y+GVRQR+WGKWVAEIREP R WLGTF TA +AA AYD AA LY
Sbjct: 166 RGKGGPENATCTYKGVRQRTWGKWVAEIREPNCGARLWLGTFDTAREAALAYDAAARKLY 345
Query: 120 GSRAQLNL 127
G A+LNL
Sbjct: 346 GPDAKLNL 369
>TC204739 similar to UP|Q40478 (Q40478) Ethylene-responsive element binding
protein, partial (27%)
Length = 1307
Score = 94.7 bits (234), Expect = 5e-20
Identities = 57/131 (43%), Positives = 81/131 (61%), Gaps = 2/131 (1%)
Frame = +2
Query: 13 QEITKPTATAAITTTPSETSNSEN-SNSSHNNNITTPNTSTTINNRKCKGKGGPDNNKFR 71
+ IT P+ T+ +TTT S+T+ + + + +NNN T ++ T N ++ K
Sbjct: 353 RNITIPSITSGLTTTMSQTTTTTTIATTMYNNNQVTSSSDETNNIKENK----------H 502
Query: 72 YRGVRQRSWGKWVAEIREP-RKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQPS 130
YRGVR+R WGK+ AEIR+P RK +R WLGTF TA +AA+AYD+AA + GS+A LN P
Sbjct: 503 YRGVRRRPWGKYAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDKAAFKMRGSKAILNF-PL 679
Query: 131 PTSSSSQSSSS 141
S +S SS
Sbjct: 680 EIGESEESVSS 712
>TC225486 similar to UP|Q70AB2 (Q70AB2) Ethylene transcription factor,
partial (49%)
Length = 1458
Score = 94.0 bits (232), Expect = 9e-20
Identities = 49/109 (44%), Positives = 71/109 (64%)
Frame = +1
Query: 69 KFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQ 128
K +YRG+RQR WGKW AEIR+PRK R WLGTF+TAE+AARAYD A + G +A++N
Sbjct: 340 KNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFP 519
Query: 129 PSPTSSSSQSSSSSSRASSSSSSTQTLRPLLPRPSGYGFSFSGSHLPVV 177
+P +SS + S + + + +T++P L G+ FS +H+ +V
Sbjct: 520 EAPGTSSVKRSKVNPQ-----ENLKTVQPNL----GHKFSAGNNHMDLV 639
>TC217467 similar to UP|Q949B2 (Q949B2) AP2 domain-containing protein Rap211,
partial (48%)
Length = 1166
Score = 93.6 bits (231), Expect = 1e-19
Identities = 53/141 (37%), Positives = 79/141 (55%), Gaps = 6/141 (4%)
Frame = +2
Query: 14 EITKPTATAAITTTPSETSNSENSNSSHNNNITTPNTSTTINNRKCKGKGGPDNNKFRYR 73
E+ T++++ T T TS+S + + N +TT +K + + YR
Sbjct: 95 EVQPTTSSSSFTITTPSTSSSSSIEEATN--------TTTKEKKKKRAISNIEGKHPTYR 250
Query: 74 GVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGSRAQLNLQ----- 128
GVR R WGKWV+EIREPRK++R WLGTF T + AARA+D AA+ + GS A LN
Sbjct: 251 GVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNFPELAAK 430
Query: 129 -PSPTSSSSQSSSSSSRASSS 148
P P S+S + +++ +S+
Sbjct: 431 LPRPASTSPKDIQAAAAKASA 493
>TC225579 similar to UP|Q84KS7 (Q84KS7) AP2/ERF-domain protein, partial (31%)
Length = 1156
Score = 93.2 bits (230), Expect = 2e-19
Identities = 52/114 (45%), Positives = 62/114 (53%), Gaps = 1/114 (0%)
Frame = +2
Query: 62 KGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAAIILYGS 121
K G K YRG+RQR WGKW AEIR+P K R WLGTF TAE+AARAYD AA + G
Sbjct: 347 KSGGRARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFPTAEEAARAYDDAAKRIRGD 526
Query: 122 RAQLNL-QPSPTSSSSQSSSSSSRASSSSSSTQTLRPLLPRPSGYGFSFSGSHL 174
+A+LN +P S Q S + SSS+Q+ P F G L
Sbjct: 527 KAKLNFPATAPPPSKKQRCLSPDTTTEQSSSSQSTTGSTGSPPSAAFHGGGDEL 688
Database: GMGI
Posted date: Oct 22, 2004 4:58 PM
Number of letters in database: 37,918,896
Number of sequences in database: 63,676
Lambda K H
0.312 0.127 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,031,546
Number of Sequences: 63676
Number of extensions: 392432
Number of successful extensions: 11123
Number of sequences better than 10.0: 624
Number of HSP's better than 10.0 without gapping: 5843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8386
length of query: 340
length of database: 12,639,632
effective HSP length: 98
effective length of query: 242
effective length of database: 6,399,384
effective search space: 1548650928
effective search space used: 1548650928
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0002.14