hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj16277/w3open/interpro/cnk_1/seq.in
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query:  mKIAA4247  ( 326 res)   mfj16277

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
acidPPc  Acid phosphatase homologues                     68.2    1.1e-15   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
acidPPc    1/1     129   273 ..     1   161 []    68.2  1.1e-15

Alignments of top-scoring domains:
acidPPc: domain 1 of 1, from 129 to 273: score 68.2, E = 1.1e-15
                   *->vglllllvaavsalfnlisaiKlvfgrpRPfflslckpdhsavddtd
                      +g+++++ ++++++f++    + v g++ P+fl +c+p ++  d+  
   mKIAA4247   129    IGVFAFG-LFATDIFVNA--GQVVTGHLTPYFLTVCQPNYTSTDCRA 172  

                   ktrtreak.qisakdvcctpnfllvleagySFPSGHtafaaafalfllly
                          ++q++++  +ct+  + +  a++SFPS H+a++ + al+++ y
   mKIAA4247   173 -------HqQFINNGNICTGDLEVIEKARRSFPSKHAALSIYSALYATMY 215  

                   lparatsrgakqiSqlfrllrklliilllllalvvgfSRvylgvHypsDV
                   +   ++ ++        rl +++l+++ l  a+++g+ Rv  ++ + sDV
   mKIAA4247   216 ITSTIKTKSS-------RLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDV 258  

                   lAGlllGilvallll<-*
                   +AG++lG +val+l    
   mKIAA4247   259 IAGFILGTAVALFLG    273  

//