hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj03248/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4235  ( 394 res)   mfj03248

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
Glyco_transf_43 Glycosyltransferase family 43           477.5   1.1e-139   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
Glyco_transf_43   1/1     165   379 ..     1   284 []   477.5 1.1e-139

Alignments of top-scoring domains:
Glyco_transf_43: domain 1 of 1, from 165 to 379: score 477.5, E = 1.1e-139
                   *->LanTLrlVpnpLHWIVVEDgegttplvsniLartGLptiythlvvkt
                      +anTL++Vpn LHW+VVED++++tpl++++L++tGL+  ythl+v+t
   mKIAA4235   165    MANTLLHVPN-LHWLVVEDAPRRTPLTARLLRDTGLN--YTHLHVET 208  

                   PstyklrgdePnwvkPRGveQRnlALrwiRehssqilgdgdregVVYFAD
                   P++yklrgd++++++PRG++QRnlALrw+Re+++++++++   gVVYFAD
   mKIAA4235   209 PRNYKLRGDARDPRIPRGTMQRNLALRWLRETFPRNSTQP---GVVYFAD 255  

                   DDNtYdLeLFeemIRnvkkvGvWpVGlLAqSGNAEEmVLmekrkemekee
                   DDNtY+LeLFeem R +++v+vWpV+                        
   mKIAA4235   256 DDNTYSLELFEEM-RSTRRVSVWPVA------------------------ 280  

                   eelvgglrVEgPvvnkngtkVvgfhtvwkpeevRpFpvDMAGFAvNlkll
                     +vgglr+E+P+vn++g kVvg++tv++p+  RpF++DMAGFAvNl+l+
   mKIAA4235   281 --FVGGLRYEAPRVNGAG-KVVGWKTVFDPH--RPFAIDMAGFAVNLRLI 325  

                   ldnpnAvFpfkvprggeGyqEssfLesLglldlddlEPlPAnnCtksvll
                   l++++A+F+ ++ + g GyqEss+L++L  ++l+dlEP+ A+nCtk    
   mKIAA4235   326 LQRSQAYFKLRGVK-G-GYQESSLLREL--VTLNDLEPK-AANCTK---- 366  

                   wwLrvearadsklppgwiidpnrEILVWHTRTekpkl<-*
                                           ILVWHTRTekp l   
   mKIAA4235   367 ------------------------ILVWHTRTEKPVL    379  

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