hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg18924/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4233  ( 1195 res)   mbg18924

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
Hydrolase    haloacid dehalogenase-like hydrolase        16.9      0.015   1
E1-E2_ATPase E1-E2 ATPase                               -91.6     0.0017   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
E1-E2_ATPase   1/1     138   396 ..     1   245 []   -91.6   0.0017
Hydrolase      1/1     434   853 ..     1   183 []    16.9    0.015

Alignments of top-scoring domains:
E1-E2_ATPase: domain 1 of 1, from 138 to 396: score -91.6, E = 0.0017
                   *->villivllnatlefyqesrAekAleaLkklvpptAtVlRdGgkeeei
                       il++  + +++e + + +A +A+ +      ++++VlR+G  +e +
   mKIAA4233   138    FILAVAAIKEIIEDIKRHKADNAVNK------KQTQVLRNG-AWEIV 177  

                   paeeLvpGDiVevkpGdrVPADgrvvege...stLkVDESaLTGESlPVe
                     e + +G iV v  G+  PAD+  ++++++++++++  S+L GE     
   mKIAA4233   178 HWEKVAVGEIVKVTNGEHLPADLLSLSSSepqAMCYIETSNLDGETNLKI 227  

                   Khsdvvtp....................................dnp.le
                   ++  ++t + ++ ++  + +++ + ++++++  +  ++ + +++++++l+
   mKIAA4233   228 RQGLPATSdikdidslmrisgriecespnrhlydfvgnirldghGTVpLG 277  

                   rgnmVfaGTlvvs.GsltgvVtatGddTflgkIakLVeeAqs..sktPlQ
                    + ++  G + +++ + +g+V+ tG dT      kL+++  s++ k    
   mKIAA4233   278 ADQILLRGAQLRNtQWVHGIVVYTGHDT------KLMQNSTSppLKLSNV 321  

                   rlldkfgkiltpvililavlvfiiwllr..............nfn..aaf
                    +++ +   +  +ili+  lv+ ++ ++ ++++++++   + ++++ ++f
   mKIAA4233   322 ERITNVQILILFCILIAMSLVCSVGSAIwnrrhsgkdwylhlHYGgaSNF 371  

                   ggswlegllyalifa..vallVaAcPegLplvvtvalalGtgrmAkkgaL
                   g ++l+ +++ + ++ +++llV                            
   mKIAA4233   372 GLNFLT-FIILFNNLipISLLVT--------------------------- 393  

                   VKglpAvEt<-*
                         +E    
   mKIAA4233   394 ------LEV    396  

Hydrolase: domain 1 of 1, from 434 to 853: score 16.9, E = 0.015
                   *->ikavvFDkDGTLtdgk...............................
                      +k ++ Dk+GTLt    + ++ +  +   ++ +++++ + ++++ ++
   mKIAA4233   434    VKYIFSDKTGTLTCNVmqfkkctiagvayghvpepedygcspdewqs 480  

                   ....................eppiaeaiveaaaelgl..lpleevekllg
                   ++ +++++ ++++  ++ ++ +p a +i e++    + ++++ e e    
   mKIAA4233   481 sqfgdektfndpslldnlqnNHPTAPIICEFLTMMAVchTAVPEREGDKI 530  

                   rgl.g..erilleggltaell.............................
                    +  +++++++l+++++  ++  +++++++   ++ + +++ +  +  + 
   mKIAA4233   531 IYQaAspDEGALVRAAKQLNFvftgrtpdsviidslgqeeryellnvlef 580  

                   ..................................................
                   ++ +++ +   ++++++ +   ++ ++   ++  ++++ ++ + ++ +  
   mKIAA4233   581 tsarkrmsvvvrtpsgklrlyckgadtviyerlaetskykeitlkhleqf 630  

                   ..................................................
                    +++ ++      + ++++ ++ +   ++ +++  ++  + +++ +  ++
   mKIAA4233   631 ateglrtlcfavaeisesdfeewravyhrastsvqnrllkleesyeliek 680  

                   d.evlglial.dklypgarealkaLkerGikvailTggdr.naealle..
                   + ++lg+ a +dkl + ++e+++ L ++ ik++ilTg+ +++a  ++ + 
   mKIAA4233   681 NlQLLGATAIeDKLQDQVPETIETLMKADIKIWILTGDKQeTAINIGHsc 730  

                   ..................................................
                   +  +++ +    ++++ ++++++ +++ ++ ++  +++++     ++++ 
   mKIAA4233   731 rllkrnmgmivinegsldgtretlsrhcttlgdalrkendfaliidgktl 780  

                   ....algla.lfdvivdsddvggvgpivvgKPkpeifllalerlgvkpee
                   +    +g++++f  +  s+ +      ++ + +p  + +++e+ +++++ 
   mKIAA4233   781 kyalTFGVRqYFLDLALSCKAV-----ICCRVSPLQKSEVVEMVKKQVKV 825  

                   vgpevlmvGDgvnDapalaaAGvgvamgngg<-*
                   +   +l++GDg nD+ ++  A+vgv +       
   mKIAA4233   826 I---TLAIGDGANDVSMIQTAHVGVGISGNE    853  

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