hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mia/mia04077/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4220  ( 516 res)   mia04077

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
Oxysterol_BP Oxysterol-binding protein                  755.3   2.6e-223   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
Oxysterol_BP   1/1      90   506 ..     1   440 []   755.3 2.6e-223

Alignments of top-scoring domains:
Oxysterol_BP: domain 1 of 1, from 90 to 506: score 755.3, E = 2.6e-223
                   *->kSqhsSsssltsklkfilsepkdltrRldipeeslspisLwsisqlw
                      +S++sS+ sl++++k++l+e+k+++r ++ip++++++++Lwsi++++
   mKIAA4220    90    ISGASSDVSLDEQYKHQLEETKKEKR-TRIPYKPNYSLNLWSIMKNC 135  

                   vGkdLskitlPvfinEpkSmLqrvtedleYpelLdkAaaredsltrWfly
                   +Gk+Lski++Pv++nEp+SmLqr+tedleY+elLd+Aa++e+sl++ ++y
   mKIAA4220   136 IGKELSKIPMPVNFNEPLSMLQRLTEDLEYHELLDRAAKCENSLEQ-LCY 184  

                   vaastlssysettrrvkKPlNPlLGEtFelkrendElpnkgqyrllsEQV
                   vaa+t+ssys+t++r++KP+NPlLGEtFel+r++   +n  +yr+++EQV
   mKIAA4220   185 VAAFTVSSYSTTVFRTSKPFNPLLGETFELDRLE---EN--GYRSICEQV 229  

                   SHHPPvsAffaespkskwrvqgevqikskFlGkslavmkeGltvhtildi
                   SHHPP++A++aes+++ w++++e++i+skF+Gk+l++m++G+ +h+i++ 
   mKIAA4220   230 SHHPPAAAHHAESKNG-WTLRQEIKITSKFRGKYLSIMPLGT-IHCIFHS 277  

                   kdingkpEtYtwtqPnttveGILvGkpfvElSGdesvinsstGdkcvIeF
                   ++     ++Ytw++++ttv++I+vGk+++++SG+++++n++tGdkc+++F
   mKIAA4220   278 TG-----HHYTWKKVTTTVHNIIVGKLWIDQSGEIDIVNHKTGDKCNLKF 322  

                   ktkGyfSGkkdsfkgrivkdpdgnkdKEkklytlsGkWndsmyikKvqsk
                   ++++yfS++++++++++v+dp+g     k++++l+G+W+++m ++Kvq+ 
   mKIAA4220   323 VPYSYFSRDVARKVTGEVTDPSG-----KVHFALLGTWDEKMDCFKVQA- 366  

                   segelflDahktphealkvrpLeeqhelesrkaWkkvadalkvgnltvft
                    +ge+++Da++++hea+ +r++++++++++++a++++++++++++l++++
   mKIAA4220   367 ASGENGGDARQRGHEAEDSRVMLWKRNPLPKNAENMYYFSELALTLNAWE 416  

                   ktkneleerqRpllkptesrgvedqralfkrledkedldkeekkekpead
                    +++++++r+Rp+++++e++++++++a+++rle+k+ +++++k+e+++a+
   mKIAA4220   417 GGTAPTDSRLRPDQRLMENGRWDEANAEKQRLEEKQ-RLSRKKREAEAAK 465  

                   dkerkqkgslyepkwfvpsgqpvtdKeklyikarkeyWefrKk<-*
                   ++e++++ ++y+++wf+++++pvt   +l++++++eyWe+++k   
   mKIAA4220   466 ATEDGTPHDPYKALWFERKKDPVT--RELTHIYSGEYWECKEK    506  

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