hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg08227/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4212  ( 600 res)   mbg08227

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
FYVE     Protein present in Fab1, YOTB, Vac1, and EEA    96.6      3e-24   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
FYVE       1/1     526   593 ..     1    81 []    96.6    3e-24

Alignments of top-scoring domains:
FYVE: domain 1 of 1, from 526 to 593: score 96.6, E = 3e-24
                   *->etaphWvpDeeasnClmnCgkeFtlvtrRrHHCRnCGrifCskCssk
                       + ++W +D ea +C   C+k F++  rR+HHCRnCG+ifC+ Css+
   mKIAA4212   526    LKGHTWLKDDEATHC-KQCEKDFSI-SRRKHHCRNCGHIFCNTCSSN 570  

                   kaplpklgkekkngknedftpvRVCdsCyerlsk<-*
                   ++ lp+  k           pvRVCdsC++ l     
   mKIAA4212   571 ELALPSYPK-----------PVRVCDSCHTLLLQ    593  

//