hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj22326/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4210  ( 647 res)   mfj22326

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
BTB      Broad-Complex, Tramtrack and Bric a brac       119.1    4.9e-31   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
BTB        1/1     106   203 ..     1   114 []   119.1  4.9e-31

Alignments of top-scoring domains:
BTB: domain 1 of 1, from 106 to 203: score 119.1, E = 4.9e-31
                   *->cDvtlvvggdlggdnaegkkfhasqHkavLaacrrdSpyFkalfes.
                      cDv+lvvg          kk++a  H+++L+ac   SpyF+a+f+++
   mKIAA4210   106    CDVVLVVGA---------KKIYA--HRVILSAC---SPYFRAMFTGe 138  

                   ........ieldDeallievspeaFralLnflYt.kldlpeedvenveel
                     +++++++ + D      ++  a+++l++f Yt+++ + e    nv+ l
   mKIAA4210   139 laesrqteVVIRD------IDERAMELLIDFAYTsQITVEEG---NVQTL 179  

                   LelAdfldSYGqip.lvelCeefllknl<-*
                   L +A +l    q+ +++e+C+efl+++l   
   mKIAA4210   180 LPAACLL----QLAeIQEACCEFLKRQL    203  

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