hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj16282/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4203  ( 1062 res)   mfj16282

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TyrKc    Tyrosine kinase, catalytic domain              449.7   1.5e-130   1
S_TKc    Serine/Threonine protein kinases, catalytic    186.3    2.8e-51   1
B41      Band 4.1 homologues                            146.6    2.6e-39   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
B41        1/1      41   268 ..     1   232 []   146.6  2.6e-39
TyrKc      1/1     432   686 ..     1   280 []   449.7 1.5e-130
S_TKc      1/1     432   690 ..     1   231 []   186.3  2.8e-51

Alignments of top-scoring domains:
B41: domain 1 of 1, from 41 to 268: score 146.6, E = 2.6e-39
                   *->spkprvlkVylldgt.......tlefevdssttaeelletvcrklgl
                        ++rvlkV+ + ++++++++    ++++ +t+++ ++++++ +  +
   mKIAA4203    41    GAMERVLKVFHYFESssepttwASIIRHGDATDVRGIIQKIVDSHKV 87   

                   spreseyFgLqfedkded.shWldpaktilkqdvks...pksepltlyFR
                     ++  ++g ++ +  + ++hWl+ +  +  +++k++  +++e++++ +R
   mKIAA4203    88 --KHVACYGFRLSHLRSEeVHWLHVDMGVSSVREKYelaHPPEEWKYELR 135  

                   vkFyppdwhgppeqlkeDptrynllylQvrddilsGrlpcpseeeallLA
                   +++ p+ +    +q++eD+ ++n++y+Qv++d++++ +   ++e al L+
   mKIAA4203   136 IRYLPKGF---LNQFTEDKPTLNFFYQQVKSDYMQEIADQVDQEIALKLG 182  

                   aLalqaefGdydpeeeekkkslkhvakelslkrflPkqlldsikasflqi
                   +L +++ + ++  +++ekk+++++++k+++lkrf+Pk+llds+ka     
   mKIAA4203   183 CLEIRRSYWEMRGNALEKKSNYEVLEKDVGLKRFFPKSLLDSVKA----- 227  

                   qltlkewrerIvelhkehaglspeeaklkYLelarrLpptYGvelF<-*
                       k +r+ I++ ++++a+l++ee+ lk++e+++    ++  e+F   
   mKIAA4203   228 ----KTLRKLIQQTFRQFANLNREESILKFFEILSPVY-RFDKECF    268  

TyrKc: domain 1 of 1, from 432 to 686: score 449.7, E = 1.5e-130
                   *->ltlgkkLGeGaFGeVykGtlk......ieVAVKtLkeda....keeF
                      ++lg+ +GeG+FG V++G++ +++++ + VA+Kt+k++++++ +e F
   mKIAA4203   432    IELGRCIGEGQFGDVHQGVYLspenpaLAVAIKTCKNCTsdsvREKF 478  

                   lrEakiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymegGdLl
                   l+Ea  M+++  +Hp+iVkL+Gv+te         P++i+mE++ +G L+
   mKIAA4203   479 LQEALTMRQF--DHPHIVKLIGVITE--------NPVWIIMELCTLGELR 518  

                   dyLrknrpklslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenk
                   ++L+ ++  l l+ L+ +A+Q +   +YLesk+fvHRD+AARN+Lv++n 
   mKIAA4203   519 SFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND 568  

                   vvKIsDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWmAPEslkd
                   +vK +DFGLsR+ +d         yY+++    gk  lPi+WmAPEs+++
   mKIAA4203   569 CVKLGDFGLSRYMEDS-------TYYKAS---KGK--LPIKWMAPESINF 606  

                   gkFtskSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneevleylkkGyRl
                   ++Fts+SDVW+FGV++WEi+  G +P  g     ++n +v+ ++++G+Rl
   mKIAA4203   607 RRFTSASDVWMFGVCMWEILMHGVKPFQG-----VKNNDVIGRIENGERL 651  

                   pkPendlpiSsvtCPdelYdlMlqCWaedPedRPtFselverl<-*
                   p P+n        CP+ lY+lM++CWa+dP+ RP+F+el+ +l   
   mKIAA4203   652 PMPPN--------CPPTLYSLMTKCWAYDPSRRPRFTELKAQL    686  

S_TKc: domain 1 of 1, from 432 to 690: score 186.3, E = 2.8e-51
                   *->YellkklGkGaFGkVylardkk...tgrlvAiKvik........eri
                       el++ +G+G FG V++++  ++++    vAiK  k+ ++++ +e++
   mKIAA4203   432    IELGRCIGEGQFGDVHQGVYLSpenPALAVAIKTCKnctsdsvrEKF 478  

                   lrEikiLkk.dHPNIVkLydvfeddklylVmEyceGdlGdLfdllkkrgr
                   l+E   +++ dHP+IVkL++v+ ++ ++++mE+c    G+L+++l+ r++
   mKIAA4203   479 LQEALTMRQfDHPHIVKLIGVITENPVWIIMELCTL--GELRSFLQVRKY 526  

                   rglrkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds..hvK
                         l+      y++Q+  aL+YL s++++HRD+   N+L++s+++vK
   mKIAA4203   527 S-----LDLaSLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSndCVK 571  

                   laDFGlArql........ttfvGTpeYmAPEvl...gYgkpavDiWSlGc
                   l+DFGl+r +++++  + +       +mAPE ++ + ++  a+D+W +G+
   mKIAA4203   572 LGDFGLSRYMedstyykaSKGKLPIKWMAPESInfrRFTS-ASDVWMFGV 620  

                   ilyEllt.GkpPFp..qldlifkkig...........SpeakdLikklLv
                   +++E l +G  PF++   + ++ +i ++++ + +++ +p + +L+ k++ 
   mKIAA4203   621 CMWEILMhGVKPFQgvKNNDVIGRIEngerlpmppncPPTLYSLMTKCWA 670  

                   kdPekRlta.eaLedeldikaHPff<-*
                   +dP++R+  +e+ +      +   +   
   mKIAA4203   671 YDPSRRPRFtELKA-----QLSTIL    690  

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