hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj18089/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4197  ( 244 res)   mfj18089

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
IQ       IQ calmodulin-binding motif                     20.8      0.032   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
IQ         1/1     148   168 ..     1    21 []    20.8    0.032

Alignments of top-scoring domains:
IQ: domain 1 of 1, from 148 to 168: score 20.8, E = 0.032
                   *->rraaikIQaawRGylaRkryk<-*
                        +a++IQ+a+R+y+ R++ k   
   mKIAA4197   148    DVSATIIQRAYRRYRLRQNVK    168  

//