hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/Pfam Sequence file: /cdna4/rodent/full/goal/mbg/mbg00956/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA4195 ( 1061 res) mbg00956 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- E1-E2_ATPase E1-E2 ATPase 423.1 2.5e-123 1 Cation_ATPase_C Cation transporting ATPase, C-terminu 292.2 6.4e-84 1 Cation_ATPase_N Cation transporter/ATPase, N-terminus 103.1 5.4e-27 1 Hydrolase haloacid dehalogenase-like hydrolase 52.8 7.4e-12 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Cation_ATPase_N 1/1 16 94 .. 1 87 [] 103.1 5.4e-27 E1-E2_ATPase 1/1 110 358 .. 1 245 [] 423.1 2.5e-123 Hydrolase 1/1 362 740 .. 1 183 [] 52.8 7.4e-12 Cation_ATPase_C 1/1 835 1007 .. 1 199 [] 292.2 6.4e-84 Alignments of top-scoring domains: Cation_ATPase_N: domain 1 of 1, from 16 to 94: score 103.1, E = 5.4e-27 *->eelkkevdldahkltvEevleklktdpeeGLsseeaaeRlkkyGpNe ++++ ah+ tvEevl ++++++++GLs e++++ ++ G Ne mKIAA4195 16 AAMEN-----AHTKTVEEVLGHFGVNESTGLSLEQVKKLKERWGSNE 57 LppekktslwlkfLeQFkdplvllLlaAAiiSALdfvlgg<-* Lp+e++++l+++++eQF d+lv++Ll+AA+iS fvl++ mKIAA4195 58 LPAEEGKTLLELVIEQFEDLLVRILLLAACIS---FVLAW 94 E1-E2_ATPase: domain 1 of 1, from 110 to 358: score 423.1, E = 2.5e-123 *->villivllnatlefyqesrAekAleaLkklvpptAtVlRdG.gkeee villi+++na+++++qe++Ae+A+eaLk++ p++ +V+R+++ + + mKIAA4195 110 VILLILVANAIVGVWQERNAENAIEALKEYEPEMGKVYRQDrKSVQR 156 ipaeeLvpGDiVevkpGdrVPADgrvveges.tLkVDESaLTGESlPVeK i+a+++vpGDiVe+++Gd+VPAD+r+++ +s+tL+VD+S+LTGES+ V K mKIAA4195 157 IKAKDIVPGDIVEIAVGDKVPADIRLTSIKStTLRVDQSILTGESVSVIK 206 hsdvvtp.dnp.lergnmVfaGTlvvsGsltgvVtatGddTflgkIakLV h+d+v+++++++++++nm+f+GT++ G + gvV+atG +T++gkI + + mKIAA4195 207 HTDPVPDpRAVnQDKKNMLFSGTNIAAGKAMGVVVATGVNTEIGKIRDEM 256 eeAqssktPlQrlldkfgkiltpvililavlvfiiwllrnfn.aafggsw +++++tPlQ++ld+fg +l++vi +++++v+ii+++ +fn++++ggsw mKIAA4195 257 VATEQERTPLQQKLDEFGEQLSKVISLICIAVWIINIG-HFNdPVHGGSW 305 legllyalifavallVaAcPegLplvvtvalalGtgrmAkkgaLVKglpA ++g++y++++aval+VaA+PegLp+v+t++lalGt+rmAkk+a+V++lp+ mKIAA4195 306 IRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPS 355 vEt<-* vEt mKIAA4195 356 VET 358 Hydrolase: domain 1 of 1, from 362 to 740: score 52.8, E = 7.4e-12 *->ikavvFDkDGTLtdgkeppiaeaiveaaaelgl..........lple + +++ Dk+GTLt+ + + +++ + +++++ + ++ mKIAA4195 362 TSVICSDKTGTLTTNQ-----MSVCRMFILDKVegdtcslnefSITG 403 evekllgrgl.g...erilleggltaell..................... +++++g+ +++++++ +++ gl++ + +++ + ++ ++ ++ mKIAA4195 404 STYAPIGEVQkDdkpVKCHQYDGLVELATicalcndsaldyneakgvyek 453 .................................................. ++ +++ + ++ + +++ ++ ++ ++ + ++ + +++ + + mKIAA4195 454 vgeatetaltclvekmnvfdtelkglskieranacnsvikqlmkkeftle 503 .................................................. ++++++ + +++++++++ ++ ++ +++ ++ ++ + ++++ + mKIAA4195 504 fsrdrksmsvyctpnkpsrtsmskmfvkgapegvidrcthirvgstkvpm 553 .................................................. +++ + + + ++ ++++++ + +++++ ++++ + +++ + + mKIAA4195 554 tpgvkqkimsvirewgsgsdtlrclalathdnplkreemhledsanfiky 603 ..d.evlglial.dklypgarealkaLkerGikvailTggdr.naealle +++ ++g + d+++ +++ +k ++++Gi+v+++Tg++ ++a+a+ + mKIAA4195 604 etNlTFVGCVGMlDPPRIEVASSVKLCRQAGIRVIMITGDNKgTAVAICR 653 .....algla.lfdvivdsddvggvgpivvgKPkpeifllalerlgvkpe + + + + ++ + ++ + +p + + a+ ++ + mKIAA4195 654 rigifGQDEDvTSKAFTGREFDE---------LSPSAQRDACLNARCFAR 694 evg...............pe.vlmvGDgvnDapalaaAGvgvamgngg<- +++++++ + ++ +e ++m GDgvnDapal++ +g+amg+g+ mKIAA4195 695 --VepshkskiveflqsfDEiTAMTGDGVNDAPALKKSEIGIAMGSGT 740 * mKIAA4195 - - Cation_ATPase_C: domain 1 of 1, from 835 to 1007: score 292.2, E = 6.4e-84 *->RpPRnpkkDeliftgllffrylviGvivavatlaaFvwwfygggenG +pPRnpk e++++g+lffryl+iG++v++at++a++wwf++ mKIAA4195 835 KPPRNPK--EPLISGWLFFRYLAIGCYVGAATVGAAAWWFIAA---- 875 edfgPhllygqlshwescgandltdsfkgqewCeifrkglearaqTmaFt d+gP+++++qlsh+ +c+ + +++f +++C+if+ + ++Tma++ mKIAA4195 876 -DGGPRVSFYQLSHFLQCKED--NPDF-DGVDCAIFE---SPYPMTMALS 918 vlVviqmfNAWEalncrsefFmhpldrnSlfqmgpgLfrNkwLllAvvls vlV+i+m+N aln++se ++Sl++m+p ++N+wL+++++ls mKIAA4195 919 VLVTIEMCN---ALNSLSE-------NQSLLRMPP--WENIWLVGSICLS 956 lalqllivYvPglqtiFgthpllslqeWlvvigfsflvfildElrKfikR ++l++li+Yv++l+ iF+++pl +l++Wl+v+++s++v++ dE++Kf++R mKIAA4195 957 MSLHFLILYVEPLPLIFQITPL-NLTQWLMVLKISLPVILMDETLKFVAR 1005 rr<-* + mKIAA4195 1006 NY 1007 //