hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg12940/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4194  ( 320 res)   mbg12940

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
C2       C2 domain                                      254.0      2e-72   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
C2         1/2      57   143 ..     1    88 []   128.2  1.5e-34
C2         2/2     188   276 ..     1    88 []   128.4  1.3e-34

Alignments of top-scoring domains:
C2: domain 1 of 2, from 57 to 143: score 128.2, E = 1.5e-34
                   *->LrVtvieAknLppkDfkngksDPYVkvslggdkkdqkkkTkvikktl
                      L+V v++A  Lp+ D ++g+sDPYVkv+l++dkk +k+ Tkv++ktl
   mKIAA4194    57    LTVGVLQAAELPALD-MGGTSDPYVKVFLLPDKK-KKYETKVHRKTL 101  

                   NPvWNEtFtFevpppdlqe.tLeieVyDydrfgrddflGevs<-*
                   NP +NEtFtF vp+ +l  +tL+  +yD+drf+++d++Gev+   
   mKIAA4194   102 NPAFNETFTFKVPYQELGGkTLVMAIYDFDRFSKHDIIGEVK    143  

C2: domain 2 of 2, from 188 to 276: score 128.4, E = 1.3e-34
                   *->LrVtvieAknLppkDfkngksDPYVkvslggdkkd.qkkkTkvikkt
                      L+V ++eAknL+++D ++g+sDPYVk++l + +k+ +kkkT v+kkt
   mKIAA4194   188    LTVCILEAKNLKKMD-VGGLSDPYVKIHLMQNGKRlKKKKTTVKKKT 233  

                   lNPvWNEtFtFevpppdlqe.tLeieVyDydrfgrddflGevs<-*
                   lNP++NE+F Fe+p+++ q+  ++++V Dyd++g+++ +G++    
   mKIAA4194   234 LNPYFNESFSFEIPFEQIQKvQVVVTVLDYDKLGKNEAIGKIF    276  

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