hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh00584/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4192  ( 1066 res)   mbh00584

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
E1_dh        Dehydrogenase E1 component                 499.3     3e-146   1
Transket_pyr Transketolase, pyridine binding domain     231.9    9.4e-66   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
E1_dh          1/1     299   625 ..     1   327 []   499.3   3e-146
Transket_pyr   1/1     694   909 ..     1   187 []   231.9  9.4e-66

Alignments of top-scoring domains:
E1_dh: domain 1 of 1, from 299 to 625: score 499.3, E = 3e-146
                   *->yrmmllrRmedarmalykrkgirGFyhlyaGqEAlqvGiaaAldkgv
                      +r+++++R+e+++++++++++++G++++++ ++Al+++i+ ++ +gv
   mKIAA4192   299    ARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDMSSANGV 345  

                   DyviptmPYRdhgvllarGvsk.leevlaelyGreaGcskGkGGSmhmpg
                   Dyvi++mP+R++ ++la++++k+le+++++++++ +++++G+G+ ++++g
   mKIAA4192   346 DYVIMGMPHRGRLNVLANVIRKeLEQIFCQFDSKLEAADEGSGDMKYHLG 395  

                   yygpknnrfyggngivgaqaqvpipaAvGiAlAakekreQfyvgdyrgkk
                   +y++++nr++++n++++++a++++ +A+++++++k+k+eQfy+gd++gkk
   mKIAA4192   396 MYHRRINRVTDRNITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTEGKK 445  

                   evaitlfGDGAFtnqGqffEalNfAalwklPvgGaIFvceNNqyAisTpa
                   +++i+l+GD+AF++qG+++E++++++l++++++G+++v++NNq++++T++
   mKIAA4192   446 VMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDP 495  

                   erssasteyadrArGygIPgirVDGmDplAVyqAvKeAaerAreGkGPtL
                   +++++s++++d+Ar++++P+++V+++Dp+AV++++K+Aae++++++++++
   mKIAA4192   496 RMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVCKVAAEWRNTFHKDVV 545  

                   IElvTYRygGHsmsDdpstYRtreeveevrkkkDPikrlkkhLvskGlvs
                   ++lv+YR++GH+++D+p++++ + +++++rk+k+++++++++Lvs+G+v+
   mKIAA4192   546 VDLVCYRRNGHNEMDEPMFTQ-PLMYKQIRKQKPVLQKYAELLVSQGVVN 594  

                   eeElkeiekevrkeieeAvkkAesapepnpe<-*
                   ++E++e++++++k++eeA+ +++++++++++   
   mKIAA4192   595 QPEYEEEISKYDKICEEAFTRSKDEKILHIK    625  

Transket_pyr: domain 1 of 1, from 694 to 909: score 231.9, E = 9.4e-66
                   *->iatrkAlgeALaelaerdprVvglgaDvgaygGtftvtkglldpqg.
                      ++++ A+ +A+++l++++ +V+++g+Dv   +Gtf++++++l++q  
   mKIAA4192   694    VDWALAEYMAFGSLLKEGIHVRLSGQDVE--RGTFSHRHHVLHDQNv 738  

                   ................egRvidtgIaEqamvGfanGmAlaGpnllppvea
                   ++++  + ++  +++ ++ v+++ ++E++++Gf+ G A+a pn+l+ +ea
   mKIAA4192   739 dkrtcipmnhlwpnqaPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEA 788  

                   qFsdFlnpAfdQiradaairhyaalgklpvpfvvtrapiGvGedGptHhs
                   qF+dF n  ++Q+++d++i  + a++ ++ + +v+++p+G ++ Gp+H+s
   mKIAA4192   789 QFGDFNN--MAQCIIDQFICPGQAKWVRQNG-IVLLLPHGMEGMGPEHSS 835  

                   qedeaflraiPg..................e.nNlkVvrPsdpaeakglL
                   +++e+fl+++  +++  ++ ++++ + ++  ++N++Vv++s+p + ++ L
   mKIAA4192   836 ARPERFLQMCNDdpdvlpdlqeenfdinqlYdCNWIVVNCSTPGNFFHVL 885  

                   raAirsdrddddPvvfreprqllrhk<-*
                   r++i+   ++++P+++++p++llrh+   
   mKIAA4192   886 RRQIL--LPFRKPLIVFTPKSLLRHP    909  

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