hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg03549/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4185  ( 578 res)   mbg03549

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
DEATH    DEATH domain, found in proteins involved in    124.2    1.4e-32   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
DEATH      1/1     282   376 ..     1   108 []   124.2  1.4e-32

Alignments of top-scoring domains:
DEATH: domain 1 of 1, from 282 to 376: score 124.2, E = 1.4e-32
                   *->pagaaslteltreklaklldhpldlgddWreLArkLglseaeidqie
                        g++s++e+t+ ++a+++dh   lg +W+eLAr+L++s +ei+qi+
   mKIAA4185   282    EKGPQSPCERTDIRMAIVADH---LGLSWTELARELNFSVDEINQIR 325  

                   tesprelnAyyeddlreqsyqlLrlWeqregkneqatlgtLleaLrkmgr
                   +e+p+        +l +qs++lL++W++r+gkn  at ++L ++L+k++r
   mKIAA4185   326 VENPN--------SLISQSFMLLKKWVTRDGKN--ATTDALTSVLTKINR 365  

                   ddavellrsel<-*
                   +d+v ll++++   
   mKIAA4185   366 IDIVTLLEGPI    376  

//