hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg03549/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4185  ( 578 res)   mbg03549

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Death    Death domain                                    96.0    7.5e-25   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Death      1/1     293   376 ..     1    87 []    96.0  7.5e-25

Alignments of top-scoring domains:
Death: domain 1 of 1, from 293 to 376: score 96.0, E = 7.5e-25
                   *->eklcallDpdellgkdWkeLArkLglseneIdeiesdenpgdlrspt
                      + ++a++  +++lg +W+eLAr+L++s +eI++i+  enp++l s++
   mKIAA4185   293    DIRMAIV--ADHLGLSWTELARELNFSVDEINQIRV-ENPNSLISQS 336  

                   yeLLrlWeqrhGknatvgtLleaLrklgrrdaaellesal<-*
                    +LL++W  r Gknat ++L ++L+k++r d++ lle  +   
   mKIAA4185   337 FMLLKKWVTRDGKNATTDALTSVLTKINRIDIVTLLEGPI    376  

//