hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj29222/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4181  ( 591 res)   mfj29222

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
BTB      Broad-Complex, Tramtrack and Bric a brac       120.8    1.5e-31   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
BTB        1/1      48   146 ..     1   114 []   120.8  1.5e-31

Alignments of top-scoring domains:
BTB: domain 1 of 1, from 48 to 146: score 120.8, E = 1.5e-31
                   *->cDvtlvvggdlggdnaegkkfhasqHkavLaacrrdSpyFkalfes.
                      +Dv l++g+         + f++  H+avLaac   S yF+a+f+++
   mKIAA4181    48    TDVLLHAGN---------RTFPC--HRAVLAAC---SRYFEAMFSGg 80   

                   ........ieldDeallievspeaFralLnflYt.kldlpeedvenveel
                    ++++++++++d      +++pe++++lL++ Y+++++++ee   n+e+l
   mKIAA4181    81 lkesqdseVNFDN-----SIHPEVLELLLDYAYSsRVIINEE---NAESL 122  

                   LelAdfldSYGqip.lvelCeefllknl<-*
                   Le+ d+l    + ++++++C efl+knl   
   mKIAA4181   123 LEAGDML----EFQdIRDACAEFLEKNL    146  

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