hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh04331/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4160  ( 676 res)   mbh04331

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
RING     Ring finger                                     34.4    1.5e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
RING       1/1     467   527 ..     1    23 []    34.4  1.5e-05

Alignments of top-scoring domains:
RING: domain 1 of 1, from 467 to 527: score 34.4, E = 1.5e-05
                   *->CpICle......................pvvlpCgH.FCr.Ci....
                      C+IC+e+  + ++ ++  ++++ +++   ++  CgH ++  C+    
   mKIAA4160   467    CTICMErlvtasgyegvlrnksvrpelvGRLGRCGHmYHLlCLvamy 513  

                   ..........CPlC<-*
                   ++++++++ +CP+C   
   mKIAA4160   514 sngnkdgslqCPTC    527  

//