hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpj/mpj02503/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4154  ( 702 res)   mpj02503

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
UBX      UBX domain                                     118.1    1.6e-31   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
UBX        1/1     620   700 ..     1    90 []   118.1  1.6e-31

Alignments of top-scoring domains:
UBX: domain 1 of 1, from 620 to 700: score 118.1, E = 1.6e-31
                   *->ekaedvcrlqiRlPDGsRlvrrFnssdtlqdvydfvdshrygadepe
                      e+ae+v++l+iR+P+G++l+rrF++s++lq v+dfv+s+++++de  
   mKIAA4154   620    ENAEPVSKLRIRTPSGEFLERRFLASNKLQIVFDFVASKGFPWDE-- 664  

                   dYkheFeFsLltpfPrrlltkldesktLkeagllpnstlvlep<-*
                          F+Ll++fPrr +t+ld++k+L+e++l+p++tl+l++   
   mKIAA4154   665 -------FKLLSTFPRRDVTQLDPNKSLLEVNLFPQETLFLQA    700  

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