hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbf/mbf03536/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4152  ( 478 res)   mbf03536

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
Phosphodiest Type I phosphodiesterase / nucleotide py   419.4   3.3e-122   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
Phosphodiest   1/1      29   343 ..     1   460 []   419.4 3.3e-122

Alignments of top-scoring domains:
Phosphodiest: domain 1 of 1, from 29 to 343: score 419.4, E = 3.3e-122
                   *->pkllvislDGfradyldrlyhagltPnlsaLlaeeGvsapytltpvf
                      +k+lv+s+DGfr+dyl++     +tP+++++ +++Gv++   +t+vf
   mKIAA4152    29    QKVLVVSFDGFRWDYLYK----VPTPHFHYI-MKNGVHVNQ-VTNVF 69   

                   PtlTfPnhytlvTGlyPesHGIvgNtfyDpktgavvyffeltdseavldp
                    t+T+PnhytlvTGl+ e+HGIv+N+++Dp ++++   f l+ ++ ++d 
   mKIAA4152    70 ITKTYPNHYTLVTGLFAENHGIVANDMFDPILNKS---FSLE-HMDIYDS 115  

                   knWWdtttdglslkdng.gepiwvtaqkqGgaiaaagvkaaaffWPgsev
                   k +W             ++ piw+t q++G       + ++a +WPg++v
   mKIAA4152   116 K-FW------------EeATPIWITNQRAG-------HASGAAMWPGADV 145  

                   aiidstyyrpqypqwvapgyrrPdireelaysgrpyngdvpvlagspldl
                   +i+                  +P++     y   pyn +v          
   mKIAA4152   146 KIH----------------DSFPTY-----Y--LPYNESV---------- 162  

                   pleervdtilkarfqpldlaslewlalsaklpgtderPdllllYleepDs
                   ++e+rv +i             ew+++       +++ +l +lY+eepD 
   mKIAA4152   163 SFEDRVAKII------------EWFTA-------KDPINLGFLYWEEPDD 193  

                   aGHkyGPdnspeavldalrrvDraigrLieaLkerglledtnlivvSDHG
                    GH  GPd sp  +   +++vD+ +g+Li+ Lk+++l++++nliv+SDHG
   mKIAA4152   194 TGHDVGPD-SPL-MGSVISDVDHKLGYLIKMLKRAKLWNNVNLIVTSDHG 241  

                   mapvkspdkviflndpaylpdkgllalkeedledadsasiksdafavseg
                   m+++ s+ +vi+l++  yl+++++                      ++  
   mKIAA4152   242 MTQC-SKQRVIELDR--YLDKEHYTL--------------------IDHS 268  

                   pvariypnkpgeleevyearqavdelLsklpgvaevskliallegdphvk
                   pva+i p k+g+ +evy+a       L++                +p+++
   mKIAA4152   269 PVAAILP-KEGKFDEVYDA-------LAGA---------------HPNLT 295  

                   vylkedlpkrlhyaknerypRigdlvlvadpGwyitadyywldekkapdf
                   vy ke++p+r+hy++n   +R+ ++v+vad+Gwyi +    ++++     
   mKIAA4152   296 VYKKEEIPERWHYKHN---DRVQPIVAVADEGWYILQ---NKSDDF---- 335  

                   aktvdypgGtHGyd<-*
                          +G HGyd   
   mKIAA4152   336 ------LLGNHGYD    343  

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