hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg17504/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4137  ( 832 res)   mbg17504

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
FN2      Fibronectin type 2 domain                       96.5    3.2e-24   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
FN2        1/1     158   206 ..     1    49 []    96.5  3.2e-24

Alignments of top-scoring domains:
FN2: domain 1 of 1, from 158 to 206: score 96.5, E = 3.2e-24
                   *->gnsdGapCvFPFiYrGksYhdCTseGrndgmlWCsTTsnYDrDgkWg
                      g+++G+pC+FPF++  k+Y++CTs+Gr+dg+lWC+TT +Y  D+kWg
   mKIAA4137   158    GTAHGEPCHFPFLFLDKEYDECTSDGREDGRLWCATTYDYKTDEKWG 204  

                   fC<-*
                   fC   
   mKIAA4137   205 FC    206  

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