hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mid/mid35078/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4131  ( 789 res)   mid35078

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
DAGKa    Diacylglycerol kinase accessory domain (pres   402.1   3.1e-116   1
DAGKc    Diacylglycerol kinase catalytic domain (pres   230.8    1.2e-64   1
C1       Protein kinase C conserved region 1 (C1) dom    67.9    1.3e-15   2
EFh      EF-hand, calcium binding motif                  38.0    1.3e-06   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
EFh        1/2     177   205 ..     1    29 []    20.6     0.22
EFh        2/2     222   250 ..     1    29 []    20.2     0.29
C1         1/2     270   319 ..     1    61 []    50.2  2.8e-10
C1         2/2     335   381 ..     1    61 []    25.5   0.0072
DAGKc      1/1     432   556 ..     1   157 []   230.8  1.2e-64
DAGKa      1/1     576   750 ..     1   195 []   402.1 3.1e-116

Alignments of top-scoring domains:
EFh: domain 1 of 2, from 177 to 205: score 20.6, E = 0.22
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                      +l+ +Fr++D D +G +d  E+ ++++ +   
   mKIAA4131   177    KLEFMFRLYDSDENGLLDQAEMDQIVSQM    205  

EFh: domain 2 of 2, from 222 to 250: score 20.2, E = 0.29
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                       lke+ + +D D+dG+++++E++ + ++    
   mKIAA4131   222    ILKEMLQGMDYDKDGFVSLQEWINGGMTT    250  

C1: domain 1 of 2, from 270 to 319: score 50.2, E = 2.8e-10
                   *->Hkfvfrtf.kptfCdvCrksiwgsfkqaaksqglrCseCkvkcHkkC
                      H +  + f+kpt+C+ Cr +++g+ kq     gl+C+ Ck+++H++C
   mKIAA4131   270    HAWTLKHFkKPTYCNFCRAMLMGVGKQ-----GLCCIYCKYTVHQRC 311  

                   aekvpaqshksglsC<-*
                   ++k           C   
   mKIAA4131   312 VSKTIH-------GC    319  

C1: domain 2 of 2, from 335 to 381: score 25.5, E = 0.0072
                   *->HkfvfrtfkptfCdvCrksiwgsfkqaaksqglrCseCkvkcHkkCa
                      H +v+++  + +Cd C+ksi++++     ++++ C +C++++H kC 
   mKIAA4131   335    HAWVEGNS-SVKCDRCHKSIKCYQS----VTARHCVWCRMTFHRKCE 376  

                   ekvpaqshksglsC<-*
                                C   
   mKIAA4131   377 LST---------VC    381  

DAGKc: domain 1 of 1, from 432 to 556: score 230.8, E = 1.2e-64
                   *->plLVfvNPkSGggqgeellkseskllrkfrelLnprqVfdltktggp
                      plLV+vNPkSGg qge       ++lrkf++lLnp qVf+l++ ggp
   mKIAA4131   432    PLLVLVNPKSGGRQGE-------RILRKFHYLLNPEQVFNLDN-GGP 470  

                   dvglelefrdvpkfkeqsdqkgddrvlvcGGDGTvgwVlnaldkrelplq
                   ++gl + f d p+f          rvl+cGGDGTvgw+l+++dk++++++
   mKIAA4131   471 TPGLNF-FHDTPDF----------RVLACGGDGTVGWILDCIDKANFTKH 509  

                   cqvedrefpePPvailPlGTGNdLarvLgwgggydginekllkilkeale
                             PPva+lPlGTGNdLar+L+wgggy+g    l+kilke++ 
   mKIAA4131   510 ----------PPVAVLPLGTGNDLARCLRWGGGYEG--GSLTKILKEIE- 546  

                   eadtvkldrW<-*
                    ++ v+ldrW   
   mKIAA4131   547 QSPLVMLDRW    556  

DAGKa: domain 1 of 1, from 576 to 750: score 402.1, E = 3.1e-116
                   *->iMNNYFSiGvDAkiaLeFHnsREanPekFnSRlkNKlwYfelGtkel
                      iMNNYFSiGvDA+ia++FH +RE++PekFnSR+kNKlwYfe+Gt+e+
   mKIAA4131   576    IMNNYFSIGVDASIAHRFHMMREKHPEKFNSRMKNKLWYFEFGTSET 622  

                   fartcKdLheqIeLecDGvdidlpnkdlslEGIivLNIPSygGGtnLWGe
                   fa+tcK+Lh++IeLecDGv++dl+n  ++lEGI++LNIPS++GGtnLWGe
   mKIAA4131   623 FAATCKKLHDHIELECDGVEVDLSN--IFLEGIAILNIPSMYGGTNLWGE 670  

                   PfgskkkravcgifkksftdkedlnfekqsidDgllEVVGvtgamhmaqv
                      +kk+rav+++++ks+td+++l++++q+++D+llEVVG++gam+m+q+
   mKIAA4131   671 ---TKKNRAVIRESRKSVTDPKELKCCVQDLSDQLLEVVGLEGAMEMGQI 717  

                   rtsiqvglasiilvkllKgrRiaQCsevrlkdtiltkktiPmQVDGEP<-
                   +t  +++ a         grR+aQCs v    ti+t+k +PmQVDGEP  
   mKIAA4131   718 YT--GLKSA---------GRRLAQCSSV----TIRTNKLLPMQVDGEP   750  

                   *
                    
   mKIAA4131     -   -    

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