hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbf/mbf00283/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4128  ( 1002 res)   mbf00283

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PH       Pleckstrin homology domain.                     39.5    4.5e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/1     122   218 ..     1    82 []    39.5  4.5e-07

Alignments of top-scoring domains:
PH: domain 1 of 1, from 122 to 218: score 39.5, E = 4.5e-07
                   *->vikeGwLlkks...k.swkkryfvLfngvLlyyksk......kpkgs
                        +eG++lkk + ++++w+kr+fvL+ng+L y k + + +++k  gs
   mKIAA4128   122    DRHEGFMLKKRkwpLkGWHKRFFVLDNGMLKYSKAPldiqkgKVHGS 168  

                   ipLsgcsvre.p...cFeivt.drtlllqAeseeereeWvealqsaiaka
                   i++     + +++ + + + t+++ ++l+ +s++ ++ Wv+ l+ +    
   mKIAA4128   169 IDVGLSVMSIkKkarRIDLDTeEHIYHLKVKSQDWFDAWVSKLRHHRLYR 218  

                   <-*
                      
   mKIAA4128     -     -    

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