hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/smart.HMMs Sequence file: /cdna4/rodent/full/goal/mia/mia05063/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA4114 ( 674 res) mia05063 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ENTH Epsin N-terminal homology (ENTH) domain 145.8 4.6e-39 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ENTH 1/1 39 164 .. 1 137 [] 145.8 4.6e-39 Alignments of top-scoring domains: ENTH: domain 1 of 1, from 39 to 164: score 145.8, E = 4.6e-39 *->sdlevkVrkATnndewgpkgkhlreIlqgTsneklrssfaeimavlw s + + V+kAT+++ +gpk+khl++++q+T++ + + ++++++ l+ mKIAA4114 39 SAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMN--VNIPQLADSLF 83 rRLndkgknWrvvyKaLillhyLlrnGspfervvlealrnrnrIltLsdf +R +++ +W+vv+K+Li++h+L+ G+ ++++++l++rn++++Ls+f mKIAA4114 84 ERTTNS--SWVVVFKSLITTHHLMVYGN---ERFIQYLASRNTLFNLSNF 128 qdkvfndidsrgkDqGaniRtyakyLlelledderlkeer<-* dk ++ +g+D++ +iR+y++yL+e++ +++ ++++ mKIAA4114 129 LDK----SGLQGYDMSTFIRRYSRYLNEKAVSYRQVAFDF 164 //