hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/Pfam Sequence file: /cdna4/rodent/full/goal/mia/mia05063/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA4114 ( 674 res) mia05063 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ANTH ANTH domain 377.0 1.9e-109 1 ENTH ENTH domain 80.0 5e-20 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ENTH 1/1 38 160 .. 1 140 [] 80.0 5e-20 ANTH 1/1 38 304 .. 1 301 [] 377.0 1.9e-109 Alignments of top-scoring domains: ENTH: domain 1 of 1, from 38 to 160: score 80.0, E = 5e-20 *->yseaeikVreATnnDpwGPsgklmaeIaeaTyneklyvefeeimsvL s ++V++AT+ + +GP++k++++++++T++ +v ++ ++ L mKIAA4114 38 GSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNE--MNVNIPQLADSL 82 wkRLnkddknegknWRhVYKaLtlLeYLlknGSErvvddcreniyHkfnI ++R++ +++W +V+K+L++ ++L+ +G+Er+++++ + ++ fn+ mKIAA4114 83 FERTT------NSSWVVVFKSLITTHHLMVYGNERFIQYLASRNT-LFNL 125 rtLedFqyVfiDenGkmlrfDqGinVRkKAkelleLLnDderL<-* + + d+ + +G +D+++ +R+++++l e+ ++ mKIAA4114 126 SNFLDKSG----LQG----YDMSTFIRRYSRYLNEKAVSYRQV 160 ANTH: domain 1 of 1, from 38 to 304: score 377.0, E = 1.9e-109 *->dsdLevAVvKATshedevPpKekhvreIlvtTssnspakvaacfwal +s+ + V+KAT+he + P+K+++++ I++t++ n +++++++ +l mKIAA4114 38 GSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMN--VNIPQLADSL 82 srRlpltrnwvValKaLiliHklLreGhpsvlqellrarrrissllriss ++R ++ +wvV++K+Li++H+l+ +G+++++q+l+++++ +++ +++++ mKIAA4114 83 FERTTNS-SWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFNLSNFLDK 131 RftfrddsssltwdygafiRaYakYLdeRlefhrklpvdpGtferveygt ++ ++ +d+++fiR+Y++YL+e++ +r+ ++d f +v++g mKIAA4114 132 ---SGLQG----YDMSTFIRRYSRYLNEKAVSYRQVAFD---FTKVKRG- 170 stakkslvavddpnerNNYyeltmsmedlLdkipkLQklldrllkckptg d+++r tm++e+lL+++p++Q+++d+ll++ +++ mKIAA4114 171 ----------ADGVMR------TMNTEKLLKTVPIIQNQMDALLDFNVNS 204 nalsneciiaAlillikEsfglYkainegiinLlekffedklskhdAdaa n+l+n++i+aA++ll+k+ ++l++a+negiinLlek+f+ ++k+++++ mKIAA4114 205 NELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFD--MKKNQCKEG 252 ldiykrfskQferLkeFyevCkslgylrsletIPkLphiPpnllealeey ldiyk+f+++++r++eF++v++++g++r++ IP+L ++P++ll+ale++ mKIAA4114 253 LDIYKKFLTRMTRISEFLKVAEQVGIDRGD--IPDLSQAPSSLLDALEQH 300 lrdp<-* l+ mKIAA4114 301 LASL 304 //