hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mid/mid06095/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4110  ( 737 res)   mid06095

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
GYF      GYF domain                                     102.8    6.9e-27   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
GYF        1/1     170   225 ..     1    59 []   102.8  6.9e-27

Alignments of top-scoring domains:
GYF: domain 1 of 1, from 170 to 225: score 102.8, E = 6.9e-27
                   *->vlwlYkDpNkqgeiqGPFtasqMsqWyqaGYFtdslqvkrldeperi
                       +w+YkDp  qgeiqGPFt+++M++W+qaGYF++sl vkr++++++ 
   mKIAA4110   170    RKWFYKDP--QGEIQGPFTTQEMAEWFQAGYFSMSLLVKRGCDEGF- 213  

                   eplgdlkrligl<-*
                   +plg +++++g+   
   mKIAA4110   214 QPLGEVIKMWGR    225  

//