hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mpg/mpg00558/w3open/interpro/cnk_1/seq.in
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query:  mKIAA4098  ( 1048 res)   mpg00558

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PLCYc    Phospholipase C, catalytic domain (part); do   267.5      1e-75   1
PLCXc    Phospholipase C, catalytic domain (part); do   257.4    1.1e-72   1
C2       Protein kinase C conserved region 2 (CalB)      61.9    7.9e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PLCXc      1/1     352   503 ..     1   182 []   257.4  1.1e-72
PLCYc      1/1     626   742 ..     1   119 []   267.5    1e-75
C2         1/1     763   861 ..     1    92 []    61.9  7.9e-14

Alignments of top-scoring domains:
PLCXc: domain 1 of 1, from 352 to 503: score 257.4, E = 1.1e-72
                   *->qDmdkPLshYfInsSHNsGtfkidiFPFGLDAPEKLRLPPYVTFLLR
                       Dm++PLs+YfInsSHN                              
   mKIAA4098   352    MDMTQPLSAYFINSSHN------------------------------ 368  

                   FTYLtgkQlwgessvegYiqaLkaGcRcvELDcwdg..pdgePviyHGhT
                    TYLt  Ql+g+ssve+Y+qaL  GcRcvELD+w g++p +eP i+HG+T
   mKIAA4098   369 -TYLTAGQLAGPSSVEMYRQALLWGCRCVELDVWKGrpPEEEPFITHGFT 417  

                   ftskikLsdVleaIKkfAFvtSpyPEFvIlSLenHc.spdqQakmaqmfk
                   +t++++L+dVleaI++ AF+tSpyP  vIlS+enH++s  qQakma++++
   mKIAA4098   418 MTTEVPLRDVLEAIAEAAFKTSPYP--VILSFENHVdSAKQQAKMAEYCR 465  

                   eiFgdlLytkPltsseeypgsnLPsPeqLkgKILLkgK<-*
                   +iFgd L+++Pl+    + g  LPsP++L+g+IL+k+K   
   mKIAA4098   466 SIFGDALLIDPLDKYPLSAGIPLPSPQDLMGRILVKNK    503  

PLCYc: domain 1 of 1, from 626 to 742: score 267.5, E = 1e-75
                   *->lseLvsycapvkFrsfelaeekdnafyemsSfsEtkaakkllekapt
                      +s+Lv+y  pvkF+sfe a+++ n + emsSf+Etk a+ +l+k+p+
   mKIAA4098   626    MSTLVNYVEPVKFKSFEAARKR-NKCFEMSSFVETK-AMEQLTKSPM 670  

                   dfvryNqrqLsRvYPkGtRvDSSNYnPqvfWnaGcQMVALNfQTpDkaMq
                   +fv+yN++qLsR+YPkGtRvDSSNY+Pq fWn+GcQ+VALNfQT D++Mq
   mKIAA4098   671 EFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDLPMQ 720  

                   lNqGmFraNGgCGYVLKPefLR<-*
                   lN+G+F++NG++GY+LKPef+R   
   mKIAA4098   721 LNAGVFEYNGRSGYLLKPEFMR    742  

C2: domain 1 of 1, from 763 to 861: score 61.9, E = 7.9e-14
                   *->tLtvkiisArnLp....DPYVkvs............kTkvvkktlsg
                       L+vk+is++ L +++   YV+v   + + +++++ +T++ +++   
   mKIAA4098   763    ALRVKVISGQFLSdkkvGIYVEVDmfglpvdtrrkyRTRTSQGNS-- 807  

                   fNPvWnEesetFeFevpp....s.LeieVyDk..dfiGrvtippnnahqh
                   fNPvW+Ee   F+F+ +  ++ ++L+i  ++++++f+G+ ++p       
   mKIAA4098   808 FNPVWDEE--PFDFPKVVlptlAsLRIAAFEEggKFVGHRILP------- 848  

                   sadglihlsell.ggrh.kl<-*
                          +s +++g+++  l   
   mKIAA4098   849 -------VSAIRsGYHYvCL    861  

//