hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/Pfam Sequence file: /cdna4/rodent/full/goal/mpg/mpg00558/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA4098 ( 1048 res) mpg00558 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PI-PLC-X Phosphatidylinositol-specific phospholipase 294.6 1.3e-84 1 PI-PLC-Y Phosphatidylinositol-specific phospholipase 283.4 2.8e-81 1 C2 C2 domain 64.2 2.7e-15 1 DUF1154 Protein of unknown function (DUF1154) -2.9 0.47 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PI-PLC-X 1/1 353 504 .. 1 153 [] 294.6 1.3e-84 PI-PLC-Y 1/1 625 742 .. 1 128 [] 283.4 2.8e-81 C2 1/1 764 846 .. 1 88 [] 64.2 2.7e-15 DUF1154 1/1 978 1032 .. 1 58 [] -2.9 0.47 Alignments of top-scoring domains: PI-PLC-X: domain 1 of 1, from 353 to 504: score 294.6, E = 1.3e-84 *->dmsiPLsHYfisSshntYLtgkQlwGkssvesYrqqLdaGcRcvELD dm +PLs Yfi+SshntYLt Ql+G+ssve+Yrq L+ GcRcvELD mKIAA4098 353 DMTQPLSAYFINSSHNTYLTAGQLAGPSSVEMYRQALLWGCRCVELD 399 cwdGk.pddepiIyHGhtltleiklkdVleaIkdfafkPtSpyPvIlSle +w+G++p++ep I+HG+t+t+e++l dVleaI++ afk tSpyPvIlS+e mKIAA4098 400 VWKGRpPEEEPFITHGFTMTTEVPLRDVLEAIAEAAFK-TSPYPVILSFE 448 nHcnsddqQrkmakyfkeiFgdmLltkPtldslttepglpLPslkdlrgK nH++s++qQ+kma+y+++iFgd Ll +P ld+++++ g+pLPs+ dl+g+ mKIAA4098 449 NHVDSAKQQAKMAEYCRSIFGDALLIDP-LDKYPLSAGIPLPSPQDLMGR 497 ILLknkk<-* IL+knkk mKIAA4098 498 ILVKNKK 504 PI-PLC-Y: domain 1 of 1, from 625 to 742: score 283.4, E = 2.8e-81 *->ElsnLvnYiqsikFrsFelsGeekntsyeisSFsErkvkakkllkes E+s LvnY+ ++kF+sFe + ++n ++e+sSF+E+ ka+++l++s mKIAA4098 625 EMSTLVNYVEPVKFKSFEAA-RKRNKCFEMSSFVET--KAMEQLTKS 668 pvefVkyNkrqLsRvYPkGtRvDSSNfmPqvfWnaGCQmVALNfQTsDlp p efV+yNk qLsR+YPkGtRvDSSN+mPq+fWn GCQ+VALNfQT+Dlp mKIAA4098 669 PMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDLP 718 mqiNdGmFeyNggqPdGsfksGYlLKPeflR<-* mq+N G+FeyNg+ sGYlLKPef+R mKIAA4098 719 MQLNAGVFEYNGR-------SGYLLKPEFMR 742 C2: domain 1 of 1, from 764 to 846: score 64.2, E = 2.7e-15 *->LrVtvieAknLppkDfkngksDPYVkvslggdkkd.qk.kkTkvikk LrV+vi+++ L + k YV+v + g ++d+ ++++T++ + mKIAA4098 764 LRVKVISGQFLSD----K-KVGIYVEVDMFGLPVDtRRkYRTRTSQG 805 t.lNPvWN.EtFtFe.vpppdlqetLeieVyDydrfgrddflGevs<-* +++NPvW++E F+F++v++p+l++ L+i ++++ + f+G+ + mKIAA4098 806 NsFNPVWDeEPFDFPkVVLPTLAS-LRIAAFEEGGK----FVGHRI 846 DUF1154: domain 1 of 1, from 978 to 1032: score -2.9, E = 0.47 *->kKkdilkvePvelEdLRqeKaFlKllKKQQKELdsLRKKHaKERsSi + +v P lE LR+ Ka Kl +Q L L KKH +R + mKIAA4098 978 IASILSEVTPTPLEELRSHKAMVKLRSRQDRDLRELHKKH--QRKAV 1022 QKlQctavDKL<-* + D L mKIAA4098 1023 ALTRR-LLDGL 1032 //