hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mni/mni24090/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4094  ( 386 res)   mni24090

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SAC3_GANP SAC3/GANP/Nin1/mts3/eIF-3 p25 family          269.7    3.8e-77   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SAC3_GANP   1/1      93   315 ..     1   249 []   269.7  3.8e-77

Alignments of top-scoring domains:
SAC3_GANP: domain 1 of 1, from 93 to 315: score 269.7, E = 3.8e-77
                   *->erpnPeeLrplkvLlktldyLvdkildq.aeyeaeraWYsfvddrlr
                       rp P++Lrp++vLl+t++yL ++++ ++++++ae+a  sfv+drlr
   mKIAA4094    93    PRPPPSLLRPPPVLLATVRYLAGEVAGRgDVSCAEVA--SFVADRLR 137  

                   sirqDltvqgvedsitvkdyEsferyHilslarlalEegdeqFDlqqele
                   ++r Dl++qgv+d+++++++E+  +++++++ar+++Ee+++++D++++++
   mKIAA4094   138 AVRLDLSLQGVDDADAATVLEAALATLLAVVARVRPEETRGAADPVLLQT 187  

                   elnkClgllqLkelYqdlkkkleecpneaefrigynlLyklLaslndpdf
                   +++++  + +L+++Y+++k++   +p++a+f+ g++lLy    +l++ + 
   mKIAA4094   188 QVQEG--FGSLRRCYARGKGP---YPRQAAFQ-GLFLLY----NLGSVEA 227  

                   htelellDdppkevredpyvktalqLeaalmegnnTEacNLYnkffrllq
                   + e+++l   p+++r +p+++ al+++aa++e n       ++++frll+
   mKIAA4094   228 LQEVLQL---PAALRACPPLQAALAVDAAFREDN-------HARLFRLLR 267  

                   knnqppylcdysclmddifldtiRkealrvisksYnsr...hqkiplkyl
                   +   +pyl  +sc+++  ++ ++R++al+ +s++   +++++q++pl+++
   mKIAA4094   268 T---LPYL--QSCAVQ-EHIGYARRKALARLSRAL--StpkGQTLPLDFI 309  

                   aelLgf<-*
                   +++L++   
   mKIAA4094   310 EHFLAL    315  

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