hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg06649/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4086  ( 1158 res)   mbg06649

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
KISc     Kinesin motor, catalytic domain. ATPase.       589.0   1.7e-172   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
KISc       1/1     138   466 ..     1   404 []   589.0 1.7e-172

Alignments of top-scoring domains:
KISc: domain 1 of 1, from 138 to 466: score 589.0, E = 1.7e-172
                   *->kgnIrVavRvdrdRPlnkrEksekakeespsvvtv....tvtvn...
                      +++I+V +R+   RPln+ E+ ++     + +  ++++++v++ +++
   mKIAA4086   138    ECSIKVLCRF---RPLNQAEILRG----DKFIPIFqgddSVIIGgkp 177  

                   FtFDkVFWrydvddpsasQedVFeevaaPLvdsaldGYNvaTIFAYGQTG
                   + FD+VF      +p+++Qe+V++ +a ++v ++l+GYN+ TIFAYGQT 
   mKIAA4086   178 YVFDRVF------PPNTTQEQVYHACAMQIVKDVLAGYNG-TIFAYGQTS 220  

                   SGKTyTMsGtptdpgilsndladitpdepGiIPRaledlFekide.....
                   SGKT+TM+G   dp            + +GiIPR+ +d+F++i + +++ 
   mKIAA4086   221 SGKTHTMEGKLHDP------------QLMGIIPRIARDIFNHIYSmdenl 258  

                   .fsVkvSylEIYNEkirDLLspspenSksrGkhakqsskkkLrirEdkng
                   +f++kvSy+EIY +kirDLL+ +++n               L ++Edkn 
   mKIAA4086   259 eFHIKVSYFEIYLDKIRDLLDVTKTN---------------LSVHEDKN- 292  

                   nrhdapkLtrlrgqggvyVvGLtevsVsSaeevlellerGnknRtvaaTk
                                 + ++V+G+te+ VsS+ee+l+++++G++nR+va T+
   mKIAA4086   293 --------------RVPFVKGCTERFVSSPEEILDVIDEGKSNRHVAVTN 328  

                   mNeeSSRSHaiFtitleqkeklepiadektesstnegteqiksskLnLVD
                   mNe+SSRSH+iF i ++q+               n +teq++s+kL+LVD
   mKIAA4086   329 MNEHSSRSHSIFLINIKQE---------------NVETEQKLSGKLYLVD 363  

                   LAGSERaskTgseaeGdRLkEaqnINkSLlaLGnVInALaddshdsaese
                   LAGSE++skTg  aeG  L Ea+nINkSL+aLGnVI+ALa+         
   mKIAA4086   364 LAGSEKVSKTG--AEGAVLDEAKNINKSLSALGNVISALAE--------- 402  

                   atkqaggkssHIPYRDSKLTrLLQdSLGGNsKTlMIanvSPsssnyeETl
                         g +s++PYRDSK Tr+LQdSLGGN++T+M++++SPss+n +ET 
   mKIAA4086   403 ------GTKSYVPYRDSKMTRILQDSLGGNCRTTMFICCSPSSYNDAETK 446  

                   sTLrFAsRaksIknkpavne<-*
                   sTL F++Rak+Ikn+++vn    
   mKIAA4086   447 STLMFGQRAKTIKNTASVNL    466  

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