hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj00113/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4084  ( 626 res)   mfj00113

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
CYCc     Adenylyl- / guanylyl cyclase, catalytic doma   324.3    8.5e-93   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
CYCc       1/1     391   592 ..     1   231 []   324.3  8.5e-93

Alignments of top-scoring domains:
CYCc: domain 1 of 1, from 391 to 592: score 324.3, E = 8.5e-93
                   *->eekkktdrLLyqlLPasvAeslkegrepvpaesydsVTilFsDIvgF
                      +ekkktd+LLy++LP+svA++l+++r pvpa++yd+VTilFs IvgF
   mKIAA4084   391    DEKKKTDTLLYSVLPPSVANELRHKR-PVPAKRYDNVTILFSGIVGF 436  

                   Tslc....sastPeqvvtlLndlysrFDriidrhggsrv.vvYKVeTiGD
                   +++c+++ s + ++ +v+lLndly+rFD+++d ++   ++ vYKVeT+GD
   mKIAA4084   437 NAFCskhaSGEGAMKIVNLLNDLYTRFDTLTDSRK---NpFVYKVETVGD 483  

                   aYMVvsGlPeeaetsaesklkddglteawcfavqhaeliadeaLdmvesl
                   +YM vsGlPe++ +                    ha+ i++ aLdm+e++
   mKIAA4084   484 KYMTVSGLPEPCIH--------------------HARSICHLALDMMEIA 513  

                   ktvkvphrkgelpgeglrvRiGiHtGpVvaGVvGlrmpRYclFGdTVNlA
                   ++v+v        ge +++ iGiHtG+Vv GV+G+rmpRYclFG+TVNl+
   mKIAA4084   514 GQVQVD-------GESVQITIGIHTGEVVTGVIGQRMPRYCLFGNTVNLT 556  

                   SRmEStgdpgqIqvSeetyslLqlgqaerrekggfefee<-*
                   SR+E tg+ g+I+vSe ty++L      ++ ++ f++e+   
   mKIAA4084   557 SRTETTGEKGKINVSEYTYRCL---MSPENSDPLFHLEH    592  

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