hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj00113/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4084  ( 626 res)   mfj00113

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
HNOBA         Heme NO binding associated                426.1   3.1e-124   1
Guanylate_cyc Adenylate and Guanylate cyclase catalyt   369.2   4.3e-107   1
HNOB          Heme NO binding                           330.4      2e-95   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
HNOB            1/1       7   178 ..     1   175 []   330.4    2e-95
HNOBA           1/1     207   417 ..     1   252 []   426.1 3.1e-124
Guanylate_cyc   1/1     418   612 ..     1   223 []   369.2 4.3e-107

Alignments of top-scoring domains:
HNOB: domain 1 of 1, from 7 to 178: score 330.4, E = 2e-95
                   *->MyGlivesleelVqrkYGedVWeqilekagleeekvfsvhesYdDse
                      MyG+++++le+lV+r+YG++VWe+i+++a+l+ee++f+v+++YdDs+
   mKIAA4084     7    MYGFVNHALELLVIRNYGPEVWEDIKKEAQLDEEGQFLVRIIYDDSK 53   

                   lykLvaaaskvlgipaeeiweafGrffvqflsesGydellrvlgrnlrdF
                   +y+Lvaaaskvl+++a+ei+++fG++f++f++esGyd++lrvlg+n+r+F
   mKIAA4084    54 TYDLVAAASKVLNLNAGEILQMFGKMFFVFCQESGYDTILRVLGSNVREF 103  

                   LqsLDnviHvelkklYYKPgmrpPsFrckeeesdkglvLhYrSkRtGlyh
                   Lq+LD+ +H++l+++Y  Pgmr+PsFrc++ e+ kgl+LhY+S+R+Gl++
   mKIAA4084   104 LQNLDA-LHDHLATIY--PGMRAPSFRCTDAEKGKGLILHYYSEREGLQD 150  

                   yvlGllkgvAkhFyeleisievlertee<-*
                   +v+G++k+vA++++++ei+++v+++++e   
   mKIAA4084   151 IVIGIIKTVAQQIHGTEIDMKVIQQRNE    178  

HNOBA: domain 1 of 1, from 207 to 417: score 426.1, E = 3.1e-124
                   *->slpsdlkIslstFckaFPFHivFDedLkivqaGngLrrllplnNvvk
                      + +++++Is++tFckaFPFHi+FD++L+++q+Gn+++r lp      
   mKIAA4084   207    NGTQESRISPYTFCKAFPFHIIFDRNLVVTQCGNAIYRVLP------ 247  

                   eltrqglkvtdvFelvRPkgipftFesIlsriNtvFvlrlkrgsmnvetk
                   +l+ ++++++ vF+lvRP+ i+++F++Ils+iNtvFvlr+k+g ++ve+ 
   mKIAA4084   248 QLQPGNCSLLSVFSLVRPH-IDISFHGILSHINTVFVLRSKEGLLDVEKL 296  

                   ditvqlnditfDkvSlekesqameteelaakaltQivrneseslksLeLK
                   +++++l+                                 ++++ +L+LK
   mKIAA4084   297 ECEDELT---------------------------------GAEISCLRLK 313  

                   GQMiyipesnsiLFLCSPsVdnLdELtgrGLyLSDIPlHDATRDliLlGe
                   GQMiy+pe +siLFLCSPsV+nLd+Lt+rGLyLSDIPlHDATRDl+LlGe
   mKIAA4084   314 GQMIYLPEADSILFLCSPSVMNLDDLTRRGLYLSDIPLHDATRDLVLLGE 363  

                   QrraqdeLkkrlEeklkekLEemtraLeeEKkKTDeLLysmlPpsVAqqL
                   Q+r++++L+++lE +l+++L+ ++raLe EKkKTD+LLys+lPpsVA++L
   mKIAA4084   364 QFREEYKLTQELE-ILTDRLQLTLRALEDEKKKTDTLLYSVLPPSVANEL 412  

                   rqGes<-*
                   r++++   
   mKIAA4084   413 RHKRP    417  

Guanylate_cyc: domain 1 of 1, from 418 to 612: score 369.2, E = 4.3e-107
                   *->vyaqrydnVtilFaDIvGFTalssrhsvNngpeevvrlLNdlytrFD
                      v+a+rydnVtilF+ IvGF+a++s+h +++g++++v+lLNdlytrFD
   mKIAA4084   418    VPAKRYDNVTILFSGIVGFNAFCSKHASGEGAMKIVNLLNDLYTRFD 464  

                   eLldehkf.gvyKvKTIGDaYMvasGlppaadqtkLakklqldsaaHaak
                   +L+d +k+++vyKv+T+GD YM +sGlp++             + +Ha+ 
   mKIAA4084   465 TLTDSRKNpFVYKVETVGDKYMTVSGLPEP-------------CIHHARS 501  

                   ladfALdmveaiqevnvehanrepPtvLyrGlrvRiGiHtGpVvaGviGl
                   +++ ALdm+e +++v+v ++           +++ iGiHtG Vv GviG 
   mKIAA4084   502 ICHLALDMMEIAGQVQVDGES----------VQITIGIHTGEVVTGVIG- 540  

                   takrprYdvwGdTVNlASRmEStGvpgsekIhvseetyrlLkeeesfefe
                    +++prY+++G+TVNl+SR+E+tG++g  kI+vse+tyr+L+ +e+ ++ 
   mKIAA4084   541 -QRMPRYCLFGNTVNLTSRTETTGEKG--KINVSEYTYRCLMSPENSDPL 587  

                   faleprgeveVkGkgkpGeietYfLkg<-*
                   f+le+rg+v++kGk++p  ++ +fL++   
   mKIAA4084   588 FHLEHRGPVSMKGKKEP--MQVWFLSR    612  

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