hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj08299/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4077  ( 358 res)   mfj08299

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
DUF618   Protein of unknown function, DUF618            147.0    3.3e-40   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
DUF618     1/1      99   164 ..     1    71 []   147.0  3.3e-40

Alignments of top-scoring domains:
DUF618: domain 1 of 1, from 99 to 164: score 147.0, E = 3.3e-40
                   *->snnRkKLvNlLYLANDVvQnSKvrKgpETFvdeFspvlveAfahiie
                      +n  +KL+ +LYLANDV+QnSK rKgpE F+++F+pv+veAf+h+++
   mKIAA4077    99    PN--RKLT-FLYLANDVIQNSK-RKGPE-FTKDFAPVIVEAFKHVSS 140  

                   egddkvKkklkRvinIWkeRnvFs<-*
                   e+d+++Kk+l+Rv++IW+eR+v++   
   mKIAA4077   141 ETDESCKKHLGRVLSIWEERSVYE    164  

//