hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg13014/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4070  ( 645 res)   mbg13014

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
CYCc     Adenylyl- / guanylyl cyclase, catalytic doma   182.4    4.2e-50   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
CYCc       1/1     354   565 ..     1   231 []   182.4  4.2e-50

Alignments of top-scoring domains:
CYCc: domain 1 of 1, from 354 to 565: score 182.4, E = 4.2e-50
                   *->eekkktdrLLyqlLPasvAeslkegr...epvpaesydsVTilFsDI
                        k  + r+L +lLPa+vA++     +++   + +sy+ V+++F+ I
   mKIAA4070   354    RVKLDNKRILFNLLPAHVAQHFLMSNprnMDLYYQSYSQVGVMFASI 400  

                   vgFTslc....sastPeqvvtlLndlysrFDriidr...hggsrvvvYKV
                   ++F++++ + +  +   +  +lLn++   FD++ d++   +      +K+
   mKIAA4070   401 PNFNDFYieldGNNMGVECLRLLNEIIADFDELMDKdfyKD-----LEKI 445  

                   eTiGDaYMVvsGlPeeaetsaesklkddglteawcfavqhaeliadeaLd
                   +TiG +YM++ Gl + a+            t a ++   h +  ad+a d
   mKIAA4070   446 KTIGSTYMAAVGLAPTAG------------TRAKKSISSHLCTLADFAID 483  

                   mveslktvkvphrkgelpgeglrvRiGiHtGpVvaGVvGlrmpRYclFGd
                   m ++l++ + +      +++++ +R+Gi+ GpVvaGV+G+r+p Y+++G+
   mKIAA4070   484 MFDVLDEINYQ------SYNDFVLRVGINVGPVVAGVIGARRPQYDIWGN 527  

                   TVNlASRmEStgdpgqIqvSeetyslLqlgqaerrekggfefee<-*
                   TVN+ASRm Stg++g+Iqv+ee+++lL      +r++++f++ +   
   mKIAA4070   528 TVNVASRMDSTGVQGRIQVTEEVHRLL------KRCSYQFVCRG    565  

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