hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mej/mej01380/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA4069  ( 952 res)   mej01380

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PI3Kc    Phosphoinositide 3-kinase, catalytic domain    425.9   2.1e-123   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PI3Kc      1/1     631   941 ..     1   336 []   425.9 2.1e-123

Alignments of top-scoring domains:
PI3Kc: domain 1 of 1, from 631 to 941: score 425.9, E = 2.1e-123
                   *->avIfKggDDLRQDalvlQllrlmdklLkkdsetrrldLhlrpYkvlp
                       +++K++DDLR+D++ +++++l++k L+kd+e+rr+ Lh+r+Y+v+p
   mKIAA4069   631    IMMCKPKDDLRKDCRLMEFNSLINKSLRKDAESRRRELHIRTYAVIP 677  

                   tgpksGliEvvpnsetlheIlkelrkkkkipldykqlfmldmlvaeieka
                   +++++G+iE+v+n++ l++Il + +k+k++++++k+l++           
   mKIAA4069   678 LNDECGIIEWVNNTAGLRPILTKIYKEKGVYMTGKELRQ----------- 716  

                   qyptitlakakkkalrykhatlleklkvfegatsafkppvLydwfkekfp
                                ++ +k a+l+eklkvf + + + +ppv+++wf+++fp
   mKIAA4069   717 -------------CMLPKSAALSEKLKVFQELLLPRHPPVFHEWFLRTFP 753  

                   dpneiyfeardnFtrScAgySvvtYiLGlGDRHndNImldrktGhlfHID
                   dp  +++++r+ ++rS+A++S+v+YiLGlGDRH++NI++d  tG+++H+D
   mKIAA4069   754 DP-TSWYSSRSAYCRSTAVMSMVGYILGLGDRHGENILFDSFTGECVHVD 802  

                   FGfilgngpklpgfklfgRErvPFrLTpemvdvmGgGgkpsgvfglFrsl
                   F++++++g++++++     E vPFrLT++mv++mG    p+g +glFr+ 
   mKIAA4069   803 FNCLFNKGETFEVP-----EIVPFRLTHNMVNGMG----PMGTEGLFRRA 843  

                   CerayralRknsnllmnllelMlsdglmpewrsg..ekdikylrerlrld
                   Ce ++r++R +++ lm++l ++l+d+l  ew++  +++++++l+e+ ++ 
   mKIAA4069   844 CEVTLRLMRDQREPLMSVLKTFLHDPL-VEWSKPvkGHSKAPLNETGEVV 892  

                   v.......lsdeeaaeyfkkt.ektkliessleslttrlndlfhllaql<
                   +++ +++ l  e++++ + kt++++  ++ s+e++ + l++++ + + l 
   mKIAA4069   893 NekakthvLDIEQRLQGVIKTrNRVTGLPLSIEGHVHYLIQEATDENLL  941  

                   -*
                     
   mKIAA4069     -    -    

//